data_3GP # _chem_comp.id 3GP _chem_comp.name "GUANOSINE-3'-MONOPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H14 N5 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 363.221 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3GP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1RGC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3GP P P P 0 1 N N N 49.122 32.913 1.052 1.075 0.411 4.147 P 3GP 1 3GP O1P O1P O 0 1 N N N 49.013 31.753 1.983 -0.200 0.586 4.877 O1P 3GP 2 3GP O2P O2P O 0 1 N N N 48.718 34.218 1.700 2.176 -0.224 5.134 O2P 3GP 3 3GP O3P O3P O 0 1 N N N 50.471 32.961 0.405 1.591 1.841 3.616 O3P 3GP 4 3GP "O5'" O5* O 0 1 N N N 48.421 31.849 -3.036 -3.623 -1.309 2.616 "O5'" 3GP 5 3GP "C5'" C5* C 0 1 N N N 47.183 32.526 -3.360 -2.479 -0.484 2.845 "C5'" 3GP 6 3GP "C4'" C4* C 0 1 N N R 46.423 32.719 -2.064 -1.359 -0.887 1.885 "C4'" 3GP 7 3GP "O4'" O4* O 0 1 N N N 45.133 32.043 -2.186 -1.776 -0.695 0.516 "O4'" 3GP 8 3GP "C3'" C3* C 0 1 N N S 47.107 31.946 -0.931 -0.137 0.041 2.059 "C3'" 3GP 9 3GP "O3'" O3* O 0 1 N N N 47.993 32.719 -0.162 0.844 -0.574 2.894 "O3'" 3GP 10 3GP "C2'" C2* C 0 1 N N R 45.954 31.608 0.000 0.407 0.220 0.622 "C2'" 3GP 11 3GP "O2'" O2* O 0 1 N N N 46.042 32.574 1.012 1.743 -0.276 0.528 "O2'" 3GP 12 3GP "C1'" C1* C 0 1 N N R 44.722 31.656 -0.891 -0.553 -0.619 -0.247 "C1'" 3GP 13 3GP N9 N9 N 0 1 Y N N 44.325 30.255 -0.931 -0.793 0.047 -1.530 N9 3GP 14 3GP C8 C8 C 0 1 Y N N 43.175 29.771 -0.283 -1.767 0.966 -1.792 C8 3GP 15 3GP N7 N7 N 0 1 Y N N 43.076 28.466 -0.324 -1.690 1.348 -3.033 N7 3GP 16 3GP C5 C5 C 0 1 Y N N 44.226 28.080 -1.012 -0.666 0.700 -3.640 C5 3GP 17 3GP C6 C6 C 0 1 N N N 44.628 26.775 -1.417 -0.127 0.715 -4.948 C6 3GP 18 3GP O6 O6 O 0 1 N N N 44.079 25.712 -1.174 -0.605 1.431 -5.812 O6 3GP 19 3GP N1 N1 N 0 1 N N N 45.877 26.823 -2.105 0.932 -0.078 -5.214 N1 3GP 20 3GP C2 C2 C 0 1 N N N 46.576 27.935 -2.388 1.454 -0.879 -4.242 C2 3GP 21 3GP N2 N2 N 0 1 N N N 47.727 27.790 -3.117 2.528 -1.679 -4.543 N2 3GP 22 3GP N3 N3 N 0 1 N N N 46.175 29.143 -2.064 0.963 -0.902 -3.023 N3 3GP 23 3GP C4 C4 C 0 1 Y N N 45.025 29.143 -1.376 -0.082 -0.138 -2.684 C4 3GP 24 3GP HOP2 2HOP H 0 0 N N N 48.787 34.956 1.107 2.283 0.395 5.869 HOP2 3GP 25 3GP HOP3 3HOP H 0 0 N N N 50.540 33.699 -0.188 2.421 1.682 3.147 HOP3 3GP 26 3GP "HO5'" *HO5 H 0 0 N N N 48.897 31.728 -3.848 -4.304 -1.023 3.240 "HO5'" 3GP 27 3GP "H5'1" 1H5* H 0 0 N N N 47.339 33.477 -3.919 -2.140 -0.611 3.873 "H5'1" 3GP 28 3GP "H5'2" 2H5* H 0 0 N N N 46.587 31.996 -4.140 -2.744 0.559 2.676 "H5'2" 3GP 29 3GP "H4'" H4* H 0 1 N N N 46.357 33.814 -1.864 -1.072 -1.926 2.051 "H4'" 3GP 30 3GP "H3'" H3* H 0 1 N N N 47.691 31.098 -1.359 -0.443 1.001 2.475 "H3'" 3GP 31 3GP "H2'" H2* H 0 1 N N N 45.941 30.612 0.502 0.369 1.269 0.328 "H2'" 3GP 32 3GP "HO2'" *HO2 H 0 0 N N N 45.321 32.362 1.593 2.029 -0.138 -0.385 "HO2'" 3GP 33 3GP "H1'" H1* H 0 1 N N N 43.921 32.351 -0.544 -0.144 -1.616 -0.409 "H1'" 3GP 34 3GP H8 H8 H 0 1 N N N 42.402 30.374 0.223 -2.493 1.323 -1.076 H8 3GP 35 3GP HN1 HN1 H 0 1 N N N 46.320 25.964 -2.431 1.319 -0.085 -6.104 HN1 3GP 36 3GP HN21 1HN2 H 0 0 N N N 48.257 28.634 -3.331 2.913 -2.251 -3.861 HN21 3GP 37 3GP HN22 2HN2 H 0 0 N N N 47.517 27.293 -3.983 2.899 -1.676 -5.439 HN22 3GP 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3GP P O1P DOUB N N 1 3GP P O2P SING N N 2 3GP P O3P SING N N 3 3GP P "O3'" SING N N 4 3GP O2P HOP2 SING N N 5 3GP O3P HOP3 SING N N 6 3GP "O5'" "C5'" SING N N 7 3GP "O5'" "HO5'" SING N N 8 3GP "C5'" "C4'" SING N N 9 3GP "C5'" "H5'1" SING N N 10 3GP "C5'" "H5'2" SING N N 11 3GP "C4'" "O4'" SING N N 12 3GP "C4'" "C3'" SING N N 13 3GP "C4'" "H4'" SING N N 14 3GP "O4'" "C1'" SING N N 15 3GP "C3'" "O3'" SING N N 16 3GP "C3'" "C2'" SING N N 17 3GP "C3'" "H3'" SING N N 18 3GP "C2'" "O2'" SING N N 19 3GP "C2'" "C1'" SING N N 20 3GP "C2'" "H2'" SING N N 21 3GP "O2'" "HO2'" SING N N 22 3GP "C1'" N9 SING N N 23 3GP "C1'" "H1'" SING N N 24 3GP N9 C8 SING Y N 25 3GP N9 C4 SING Y N 26 3GP C8 N7 DOUB Y N 27 3GP C8 H8 SING N N 28 3GP N7 C5 SING Y N 29 3GP C5 C6 SING N N 30 3GP C5 C4 DOUB Y N 31 3GP C6 O6 DOUB N N 32 3GP C6 N1 SING N N 33 3GP N1 C2 SING N N 34 3GP N1 HN1 SING N N 35 3GP C2 N2 SING N N 36 3GP C2 N3 DOUB N N 37 3GP N2 HN21 SING N N 38 3GP N2 HN22 SING N N 39 3GP N3 C4 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3GP SMILES ACDLabs 10.04 "O=C1c2ncn(c2N=C(N)N1)C3OC(C(OP(=O)(O)O)C3O)CO" 3GP SMILES_CANONICAL CACTVS 3.341 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@@H](O[P](O)(O)=O)[C@H]3O" 3GP SMILES CACTVS 3.341 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH](O[P](O)(O)=O)[CH]3O" 3GP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)OP(=O)(O)O)O)N=C(NC2=O)N" 3GP SMILES "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3C(C(C(O3)CO)OP(=O)(O)O)O)N=C(NC2=O)N" 3GP InChI InChI 1.03 "InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-5(17)6(3(1-16)22-9)23-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1" 3GP InChIKey InChI 1.03 ZDPUTNZENXVHJC-UUOKFMHZSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3GP "SYSTEMATIC NAME" ACDLabs 10.04 ;3'-guanylic acid ; 3GP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3GP "Create component" 1999-07-08 RCSB 3GP "Modify descriptor" 2011-06-04 RCSB #