data_3GR # _chem_comp.id 3GR _chem_comp.name D-Glyceraldehyde _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C3 H6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "GLYCERALDEHYDE; (2R)-2,3-DIHYDROXYPROPANAL" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-07-19 _chem_comp.pdbx_modified_date 2020-06-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 90.078 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3GR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1W3T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3GR C3 C1 C 0 1 N N N -10.808 60.518 12.360 -1.103 -0.671 0.297 C3 3GR 1 3GR O3 O1 O 0 1 N N N -11.406 59.626 11.356 -2.350 -0.047 -0.015 O3 3GR 2 3GR C2 C2 C 0 1 N N R -10.735 60.034 13.849 0.023 0.030 -0.466 C2 3GR 3 3GR O2 O2 O 0 1 N N N -9.329 60.001 14.135 0.146 1.376 -0.003 O2 3GR 4 3GR C1 C3 C 0 1 N N N -11.509 60.850 14.914 1.319 -0.702 -0.234 C1 3GR 5 3GR O1 O3 O 0 1 N N N -11.355 62.022 15.375 2.253 -0.131 0.276 O1 3GR 6 3GR H31 H31 H 0 1 N N N -9.777 60.725 12.036 -0.917 -0.595 1.369 H31 3GR 7 3GR H32 H32 H 0 1 N N N -11.390 61.451 12.351 -1.139 -1.721 0.008 H32 3GR 8 3GR HO3 H1 H 0 1 N N N -11.383 60.046 10.504 -3.110 -0.441 0.435 HO3 3GR 9 3GR H2 H2 H 0 1 N N N -11.126 59.006 13.875 -0.208 0.032 -1.532 H2 3GR 10 3GR HO2 HA H 0 1 N N N -9.194 59.714 15.030 0.351 1.450 0.939 HO2 3GR 11 3GR H1 H3 H 0 1 N N N -12.342 60.318 15.349 1.413 -1.739 -0.524 H1 3GR 12 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3GR C3 O3 SING N N 1 3GR C3 C2 SING N N 2 3GR C3 H31 SING N N 3 3GR C3 H32 SING N N 4 3GR O3 HO3 SING N N 5 3GR C2 O2 SING N N 6 3GR C2 C1 SING N N 7 3GR C2 H2 SING N N 8 3GR O2 HO2 SING N N 9 3GR C1 O1 DOUB N N 10 3GR C1 H1 SING N N 11 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3GR SMILES ACDLabs 12.01 "C(O)C(O)C=O" 3GR InChI InChI 1.03 "InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2/t3-/m0/s1" 3GR InChIKey InChI 1.03 MNQZXJOMYWMBOU-VKHMYHEASA-N 3GR SMILES_CANONICAL CACTVS 3.385 "OC[C@@H](O)C=O" 3GR SMILES CACTVS 3.385 "OC[CH](O)C=O" 3GR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H](C=O)O)O" 3GR SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C=O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3GR "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2,3-dihydroxypropanal" 3GR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2,3-bis(oxidanyl)propanal" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3GR "Create component" 2004-07-19 EBI 3GR "Modify descriptor" 2011-06-04 RCSB 3GR "Modify atom id" 2020-06-29 RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 3GR Glyceraldehyde PDB ? 2 3GR "(2R)-2,3-DIHYDROXYPROPANAL" PDB ? ##