data_3I3 # _chem_comp.id 3I3 _chem_comp.name "4-[7-(methanesulfonyl)-1H-indol-3-yl]-N-[(3S)-piperidin-3-yl]-5-(trifluoromethyl)pyrimidin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 F3 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-05 _chem_comp.pdbx_modified_date 2021-10-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.455 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3I3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RA5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3I3 C1 C1 C 0 1 N N N 38.440 31.190 -41.941 5.579 1.543 1.932 C1 3I3 1 3I3 C5 C2 C 0 1 Y N N 38.343 28.485 -42.611 3.981 1.230 -0.379 C5 3I3 2 3I3 C6 C3 C 0 1 Y N N 38.773 27.469 -41.757 3.667 2.171 -1.335 C6 3I3 3 3I3 C7 C4 C 0 1 Y N N 39.577 26.430 -42.232 2.362 2.314 -1.785 C7 3I3 4 3I3 C8 C5 C 0 1 Y N N 39.930 26.373 -43.564 1.366 1.520 -1.287 C8 3I3 5 3I3 C11 C6 C 0 1 Y N N 39.018 28.775 -46.136 1.718 -1.080 1.247 C11 3I3 6 3I3 C15 C7 C 0 1 Y N N 40.440 26.718 -46.752 -0.591 -0.667 0.284 C15 3I3 7 3I3 C17 C8 C 0 1 Y N N 42.271 25.295 -46.925 -2.762 0.110 0.370 C17 3I3 8 3I3 C19 C9 C 0 1 Y N N 40.956 25.523 -48.760 -2.441 -2.105 -0.187 C19 3I3 9 3I3 C21 C10 C 0 1 N N N 38.938 26.989 -48.839 -0.128 -3.079 -0.311 C21 3I3 10 3I3 C30 C11 C 0 1 N N N 45.934 25.381 -43.079 -7.684 1.917 -0.357 C30 3I3 11 3I3 C32 C12 C 0 1 N N N 44.440 26.330 -44.845 -5.495 1.102 -1.001 C32 3I3 12 3I3 S2 S1 S 0 1 N N N 37.301 29.802 -42.040 5.642 1.062 0.184 S2 3I3 13 3I3 O3 O1 O 0 1 N N N 36.362 29.953 -43.102 6.367 2.023 -0.572 O3 3I3 14 3I3 O4 O2 O 0 1 N N N 36.813 29.398 -40.768 5.916 -0.327 0.058 O4 3I3 15 3I3 C9 C13 C 0 1 Y N N 39.496 27.375 -44.437 1.663 0.562 -0.320 C9 3I3 16 3I3 C10 C14 C 0 1 Y N N 39.675 27.623 -45.868 0.862 -0.429 0.418 C10 3I3 17 3I3 N12 N1 N 0 1 Y N N 38.438 29.249 -45.016 2.978 -0.593 1.083 N12 3I3 18 3I3 C14 C15 C 0 1 Y N N 38.703 28.436 -43.961 2.981 0.416 0.144 C14 3I3 19 3I3 N16 N2 N 0 1 Y N N 41.486 26.107 -46.223 -1.461 0.322 0.490 N16 3I3 20 3I3 N18 N3 N 0 1 Y N N 42.002 25.011 -48.185 -3.247 -1.080 0.044 N18 3I3 21 3I3 C20 C16 C 0 1 Y N N 40.122 26.422 -48.101 -1.075 -1.932 -0.068 C20 3I3 22 3I3 F22 F1 F 0 1 N N N 38.831 26.370 -50.046 0.522 -3.408 0.883 F22 3I3 23 3I3 F23 F2 F 0 1 N N N 37.759 26.813 -48.136 -0.847 -4.188 -0.771 F23 3I3 24 3I3 F24 F3 F 0 1 N N N 39.072 28.354 -49.114 0.819 -2.707 -1.271 F24 3I3 25 3I3 N25 N4 N 0 1 N N N 43.351 24.702 -46.340 -3.639 1.157 0.592 N25 3I3 26 3I3 C26 C17 C 0 1 N N S 43.706 24.968 -44.945 -5.083 0.944 0.464 C26 3I3 27 3I3 C28 C18 C 0 1 N N N 44.665 23.842 -44.536 -5.830 1.975 1.314 C28 3I3 28 3I3 C29 C19 C 0 1 N N N 45.126 24.078 -43.110 -7.337 1.783 1.127 C29 3I3 29 3I3 N31 N5 N 0 1 N N N 45.090 26.502 -43.514 -6.945 0.908 -1.127 N31 3I3 30 3I3 H1 H1 H 0 1 N N N 39.143 31.030 -41.110 4.899 0.880 2.467 H1 3I3 31 3I3 H2 H2 H 0 1 N N N 39.000 31.273 -42.884 6.576 1.468 2.365 H2 3I3 32 3I3 H3 H3 H 0 1 N N N 37.874 32.117 -41.768 5.224 2.570 2.013 H3 3I3 33 3I3 H4 H4 H 0 1 N N N 38.481 27.486 -40.717 4.444 2.805 -1.737 H4 3I3 34 3I3 H5 H5 H 0 1 N N N 39.924 25.666 -41.552 2.132 3.057 -2.534 H5 3I3 35 3I3 H6 H6 H 0 1 N N N 40.538 25.559 -43.930 0.353 1.636 -1.642 H6 3I3 36 3I3 H7 H7 H 0 1 N N N 38.966 29.246 -47.106 1.441 -1.871 1.929 H7 3I3 37 3I3 H8 H8 H 0 1 N N N 40.727 25.244 -49.778 -2.847 -3.070 -0.452 H8 3I3 38 3I3 H9 H9 H 0 1 N N N 46.798 25.291 -43.754 -8.755 1.767 -0.495 H9 3I3 39 3I3 H10 H10 H 0 1 N N N 46.288 25.567 -42.054 -7.410 2.913 -0.706 H10 3I3 40 3I3 H11 H11 H 0 1 N N N 45.210 26.380 -45.629 -5.231 2.101 -1.347 H11 3I3 41 3I3 H12 H12 H 0 1 N N N 43.712 27.141 -44.995 -4.976 0.359 -1.607 H12 3I3 42 3I3 H13 H13 H 0 1 N N N 37.889 30.083 -44.968 3.760 -0.903 1.567 H13 3I3 43 3I3 H14 H14 H 0 1 N N N 43.204 23.715 -46.411 -3.298 2.033 0.831 H14 3I3 44 3I3 H15 H15 H 0 1 N N N 42.817 24.968 -44.297 -5.334 -0.060 0.806 H15 3I3 45 3I3 H16 H16 H 0 1 N N N 44.146 22.874 -44.600 -5.572 1.838 2.364 H16 3I3 46 3I3 H17 H17 H 0 1 N N N 45.535 23.837 -45.209 -5.549 2.980 0.997 H17 3I3 47 3I3 H18 H18 H 0 1 N N N 44.253 24.165 -42.446 -7.874 2.542 1.696 H18 3I3 48 3I3 H19 H19 H 0 1 N N N 45.757 23.240 -42.779 -7.624 0.793 1.480 H19 3I3 49 3I3 H20 H20 H 0 1 N N N 45.661 27.322 -43.553 -7.228 0.913 -2.095 H20 3I3 50 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3I3 F22 C21 SING N N 1 3I3 F24 C21 SING N N 2 3I3 C21 F23 SING N N 3 3I3 C21 C20 SING N N 4 3I3 C19 N18 DOUB Y N 5 3I3 C19 C20 SING Y N 6 3I3 N18 C17 SING Y N 7 3I3 C20 C15 DOUB Y N 8 3I3 C17 N25 SING N N 9 3I3 C17 N16 DOUB Y N 10 3I3 C15 N16 SING Y N 11 3I3 C15 C10 SING N N 12 3I3 N25 C26 SING N N 13 3I3 C11 C10 DOUB Y N 14 3I3 C11 N12 SING Y N 15 3I3 C10 C9 SING Y N 16 3I3 N12 C14 SING Y N 17 3I3 C26 C32 SING N N 18 3I3 C26 C28 SING N N 19 3I3 C32 N31 SING N N 20 3I3 C28 C29 SING N N 21 3I3 C9 C14 DOUB Y N 22 3I3 C9 C8 SING Y N 23 3I3 C14 C5 SING Y N 24 3I3 C8 C7 DOUB Y N 25 3I3 N31 C30 SING N N 26 3I3 C29 C30 SING N N 27 3I3 O3 S2 DOUB N N 28 3I3 C5 S2 SING N N 29 3I3 C5 C6 DOUB Y N 30 3I3 C7 C6 SING Y N 31 3I3 S2 C1 SING N N 32 3I3 S2 O4 DOUB N N 33 3I3 C1 H1 SING N N 34 3I3 C1 H2 SING N N 35 3I3 C1 H3 SING N N 36 3I3 C6 H4 SING N N 37 3I3 C7 H5 SING N N 38 3I3 C8 H6 SING N N 39 3I3 C11 H7 SING N N 40 3I3 C19 H8 SING N N 41 3I3 C30 H9 SING N N 42 3I3 C30 H10 SING N N 43 3I3 C32 H11 SING N N 44 3I3 C32 H12 SING N N 45 3I3 N12 H13 SING N N 46 3I3 N25 H14 SING N N 47 3I3 C26 H15 SING N N 48 3I3 C28 H16 SING N N 49 3I3 C28 H17 SING N N 50 3I3 C29 H18 SING N N 51 3I3 C29 H19 SING N N 52 3I3 N31 H20 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3I3 SMILES ACDLabs 12.01 "CS(=O)(=O)c1cccc2c1[NH]cc2c1nc(ncc1C(F)(F)F)NC1CCCNC1" 3I3 InChI InChI 1.03 "InChI=1S/C19H20F3N5O2S/c1-30(28,29)15-6-2-5-12-13(9-24-17(12)15)16-14(19(20,21)22)10-25-18(27-16)26-11-4-3-7-23-8-11/h2,5-6,9-11,23-24H,3-4,7-8H2,1H3,(H,25,26,27)/t11-/m0/s1" 3I3 InChIKey InChI 1.03 NUMHIIKAGFNIFT-NSHDSACASA-N 3I3 SMILES_CANONICAL CACTVS 3.385 "C[S](=O)(=O)c1cccc2c1[nH]cc2c3nc(N[C@H]4CCCNC4)ncc3C(F)(F)F" 3I3 SMILES CACTVS 3.385 "C[S](=O)(=O)c1cccc2c1[nH]cc2c3nc(N[CH]4CCCNC4)ncc3C(F)(F)F" 3I3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CS(=O)(=O)c1cccc2c1[nH]cc2c3c(cnc(n3)N[C@H]4CCCNC4)C(F)(F)F" 3I3 SMILES "OpenEye OEToolkits" 2.0.7 "CS(=O)(=O)c1cccc2c1[nH]cc2c3c(cnc(n3)NC4CCCNC4)C(F)(F)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3I3 "SYSTEMATIC NAME" ACDLabs 12.01 "4-[7-(methanesulfonyl)-1H-indol-3-yl]-N-[(3S)-piperidin-3-yl]-5-(trifluoromethyl)pyrimidin-2-amine" 3I3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-(7-methylsulfonyl-1~{H}-indol-3-yl)-~{N}-[(3~{S})-piperidin-3-yl]-5-(trifluoromethyl)pyrimidin-2-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3I3 "Create component" 2021-07-05 RCSB 3I3 "Initial release" 2021-11-03 RCSB ##