data_3IA # _chem_comp.id 3IA _chem_comp.name "L-scyllo-inositol 1,2,4-trisphosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H15 O15 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(1R,2S,3S,4R,5S,6R)-2,3,5-tris(oxidanyl)-4,6-diphosphonooxy-cyclohexyl] dihydrogen phosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-12 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 420.096 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3IA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PP8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3IA C03 C1 C 0 1 N N S N N N 9.590 29.856 85.114 -0.952 -0.566 -0.703 C03 3IA 1 3IA C02 C2 C 0 1 N N R N N N 10.971 29.639 85.701 0.394 -0.459 0.015 C02 3IA 2 3IA C01 C3 C 0 1 N N R N N N 11.551 28.294 85.299 0.923 0.972 -0.104 C01 3IA 3 3IA C06 C4 C 0 1 N N S N N N 11.647 28.180 83.789 -0.074 1.939 0.536 C06 3IA 4 3IA C05 C5 C 0 1 N N S N N N 10.281 28.411 83.177 -1.421 1.832 -0.182 C05 3IA 5 3IA C04 C6 C 0 1 N N R N N N 9.715 29.763 83.605 -1.950 0.401 -0.063 C04 3IA 6 3IA O01 O1 O 0 1 N N N N N N 12.861 28.164 85.880 2.181 1.072 0.566 O01 3IA 7 3IA O02 O2 O 0 1 N N N N N N 10.889 29.692 87.137 1.326 -1.362 -0.583 O02 3IA 8 3IA O03 O3 O 0 1 N N N N N N 9.095 31.137 85.489 -1.446 -1.902 -0.592 O03 3IA 9 3IA O04 O4 O 0 1 N N N N N N 8.401 29.860 83.040 -3.208 0.301 -0.734 O04 3IA 10 3IA O05 O5 O 0 1 N N N N N N 10.349 28.329 81.757 -2.353 2.736 0.416 O05 3IA 11 3IA O06 O6 O 0 1 N N N N N N 12.097 26.876 83.440 0.419 3.276 0.425 O06 3IA 12 3IA P01 P1 P 0 1 N N N N N N 13.573 26.825 86.474 3.542 1.501 -0.181 P01 3IA 13 3IA P04 P2 P 0 1 N N N N N N 7.876 30.528 81.665 -4.568 -0.127 0.013 P04 3IA 14 3IA O12 O7 O 0 1 N N N N N N 13.613 25.875 85.292 3.343 2.800 -0.860 O12 3IA 15 3IA O11 O8 O 0 1 N N N N N N 12.598 26.376 87.546 4.727 1.636 0.900 O11 3IA 16 3IA O13 O9 O 0 1 N N N N N N 14.937 27.143 87.032 3.932 0.380 -1.269 O13 3IA 17 3IA O41 O10 O 0 1 N N N N N N 8.819 29.970 80.610 -4.799 0.767 1.170 O41 3IA 18 3IA O42 O11 O 0 1 N N N N N N 8.076 32.003 81.893 -5.804 -0.008 -1.012 O42 3IA 19 3IA O43 O12 O 0 1 N N N N N N 6.446 30.124 81.406 -4.442 -1.648 0.528 O43 3IA 20 3IA P02 P3 P 0 1 N N N N N N 11.315 30.931 88.097 2.041 -2.552 0.233 P02 3IA 21 3IA O23 O13 O 0 1 N N N N N N 12.769 31.201 87.774 0.933 -3.619 0.706 O23 3IA 22 3IA O21 O14 O 0 1 N N N N N N 11.095 30.468 89.517 3.119 -3.281 -0.715 O21 3IA 23 3IA O22 O15 O 0 1 N N N N N N 10.390 32.037 87.641 2.727 -1.993 1.420 O22 3IA 24 3IA H1 H1 H 0 1 N N N N N N 8.916 29.063 85.471 -0.824 -0.312 -1.755 H1 3IA 25 3IA H2 H2 H 0 1 N N N N N N 11.638 30.434 85.337 0.266 -0.712 1.067 H2 3IA 26 3IA H3 H3 H 0 1 N N N N N N 10.893 27.497 85.675 1.051 1.226 -1.156 H3 3IA 27 3IA H4 H4 H 0 1 N N N N N N 12.346 28.942 83.413 -0.202 1.686 1.588 H4 3IA 28 3IA H5 H5 H 0 1 N N N N N N 9.604 27.629 83.552 -1.293 2.086 -1.234 H5 3IA 29 3IA H6 H6 H 0 1 N N N N N N 10.364 30.570 83.234 -2.078 0.148 0.989 H6 3IA 30 3IA H7 H7 H 0 1 N N N N N N 9.564 31.446 86.255 -2.299 -2.044 -1.026 H7 3IA 31 3IA H8 H8 H 0 1 N N N N N N 9.756 28.965 81.374 -2.082 3.663 0.377 H8 3IA 32 3IA H9 H9 H 0 1 N N N N N N 12.649 26.535 84.134 -0.164 3.944 0.811 H9 3IA 33 3IA H10 H10 H 0 1 N N N N N N 12.182 25.566 87.277 5.579 1.892 0.519 H10 3IA 34 3IA H11 H11 H 0 1 N N N N N N 15.600 26.681 86.532 4.077 -0.499 -0.893 H11 3IA 35 3IA H12 H12 H 0 1 N N N N N N 8.768 32.321 81.325 -6.658 -0.252 -0.628 H12 3IA 36 3IA H13 H13 H 0 1 N N N N N N 6.405 29.590 80.622 -4.290 -2.290 -0.178 H13 3IA 37 3IA H14 H14 H 0 1 N N N N N N 12.845 32.038 87.331 0.443 -4.027 -0.021 H14 3IA 38 3IA H15 H15 H 0 1 N N N N N N 10.385 30.965 89.906 3.589 -4.010 -0.288 H15 3IA 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3IA O41 P04 DOUB N N 1 3IA O43 P04 SING N N 2 3IA P04 O42 SING N N 3 3IA P04 O04 SING N N 4 3IA O05 C05 SING N N 5 3IA O04 C04 SING N N 6 3IA C05 C04 SING N N 7 3IA C05 C06 SING N N 8 3IA O06 C06 SING N N 9 3IA C04 C03 SING N N 10 3IA C06 C01 SING N N 11 3IA C03 O03 SING N N 12 3IA C03 C02 SING N N 13 3IA O12 P01 DOUB N N 14 3IA C01 C02 SING N N 15 3IA C01 O01 SING N N 16 3IA C02 O02 SING N N 17 3IA O01 P01 SING N N 18 3IA P01 O13 SING N N 19 3IA P01 O11 SING N N 20 3IA O02 P02 SING N N 21 3IA O22 P02 DOUB N N 22 3IA O23 P02 SING N N 23 3IA P02 O21 SING N N 24 3IA C03 H1 SING N N 25 3IA C02 H2 SING N N 26 3IA C01 H3 SING N N 27 3IA C06 H4 SING N N 28 3IA C05 H5 SING N N 29 3IA C04 H6 SING N N 30 3IA O03 H7 SING N N 31 3IA O05 H8 SING N N 32 3IA O06 H9 SING N N 33 3IA O11 H10 SING N N 34 3IA O13 H11 SING N N 35 3IA O42 H12 SING N N 36 3IA O43 H13 SING N N 37 3IA O23 H14 SING N N 38 3IA O21 H15 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3IA InChI InChI 1.06 "InChI=1S/C6H15O15P3/c7-1-2(8)5(20-23(13,14)15)6(21-24(16,17)18)3(9)4(1)19-22(10,11)12/h1-9H,(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)/t1-,2-,3-,4+,5+,6+/m0/s1" 3IA InChIKey InChI 1.06 MMWCIQZXVOZEGG-ADOSBGCESA-N 3IA SMILES_CANONICAL CACTVS 3.385 "O[C@H]1[C@H](O)[C@@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](O)[C@@H]1O[P](O)(O)=O" 3IA SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O)[CH]1O[P](O)(O)=O" 3IA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[C@@H]1([C@@H]([C@H]([C@@H]([C@H]([C@@H]1OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O)O" 3IA SMILES "OpenEye OEToolkits" 2.0.7 "C1(C(C(C(C(C1OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O)O" # _pdbx_chem_comp_identifier.comp_id 3IA _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(1~{R},2~{S},3~{S},4~{R},5~{S},6~{R})-2,3,5-tris(oxidanyl)-4,6-diphosphonooxy-cyclohexyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3IA "Create component" 2023-07-12 PDBE 3IA "Initial release" 2024-02-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 3IA _pdbx_chem_comp_synonyms.name "[(1R,2S,3S,4R,5S,6R)-2,3,5-tris(oxidanyl)-4,6-diphosphonooxy-cyclohexyl] dihydrogen phosphate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #