data_3J4 # _chem_comp.id 3J4 _chem_comp.name "(6S)-2,6-anhydro-6-{[(3R)-3-(sulfamoyloxy)pyrrolidin-1-yl]sulfonyl}-D-glucitol" _chem_comp.type L-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C10 H20 N2 O10 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-08-25 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 392.403 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3J4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4R5A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3J4 C4 C4 C 0 1 N N S 3.692 3.783 80.331 -3.862 -1.485 -0.563 C4 3J4 1 3J4 C5 C5 C 0 1 N N S 2.871 4.329 81.488 -2.359 -1.648 -0.802 C5 3J4 2 3J4 C6 C6 C 0 1 N N N 3.623 5.135 82.492 -1.749 -2.475 0.332 C6 3J4 3 3J4 OAO OAO O 0 1 N N N -1.629 2.476 86.020 3.949 0.531 0.391 OAO 3J4 4 3J4 SAW SAW S 0 1 N N N -1.889 1.410 87.114 4.752 -0.761 0.336 SAW 3J4 5 3J4 OAB OAB O 0 1 N N N -3.294 1.380 87.256 5.960 -0.513 1.042 OAB 3J4 6 3J4 OAC OAC O 0 1 N N N -1.151 1.692 88.238 3.852 -1.806 0.678 OAC 3J4 7 3J4 NAA NAA N 0 1 N N N -1.233 0.089 86.683 5.176 -1.007 -1.246 NAA 3J4 8 3J4 O2 O2 O 0 1 N N N 1.634 0.835 79.606 -3.925 1.413 -0.392 O2 3J4 9 3J4 C2 C2 C 0 1 N N S 2.293 1.710 80.466 -3.359 0.630 0.660 C2 3J4 10 3J4 C3 C3 C 0 1 N N S 3.490 2.422 79.952 -4.084 -0.717 0.744 C3 3J4 11 3J4 O3 O3 O 0 1 N N N 3.833 2.190 78.577 -5.482 -0.496 0.937 O3 3J4 12 3J4 O4 O4 O 0 1 N N N 5.108 4.012 80.474 -4.474 -2.773 -0.469 O4 3J4 13 3J4 O6 O6 O 0 1 N N N 3.079 5.346 83.772 -0.371 -2.726 0.051 O6 3J4 14 3J4 O5 O5 O 0 1 N N N 1.713 3.632 81.943 -1.741 -0.360 -0.837 O5 3J4 15 3J4 C1 C1 C 0 1 N N S 1.473 2.304 81.615 -1.875 0.385 0.375 C1 3J4 16 3J4 SAX SAX S 0 1 N N N -0.337 2.170 81.646 -1.021 1.976 0.204 SAX 3J4 17 3J4 OAD OAD O 0 1 N N N -0.565 0.861 81.361 -1.526 2.696 -0.913 OAD 3J4 18 3J4 OAE OAE O 0 1 N N N -0.926 3.167 80.846 -0.872 2.601 1.472 OAE 3J4 19 3J4 NAV NAV N 0 1 N N N -0.632 2.482 82.976 0.524 1.571 -0.235 NAV 3J4 20 3J4 CAM CAM C 0 1 N N N -0.227 1.814 83.912 1.640 1.310 0.692 CAM 3J4 21 3J4 CAL CAL C 0 1 N N N -0.756 3.842 83.467 1.007 1.407 -1.614 CAL 3J4 22 3J4 CAK CAK C 0 1 N N N -0.245 3.841 84.891 2.495 1.003 -1.533 CAK 3J4 23 3J4 CAP CAP C 0 1 N N R -0.368 2.661 85.282 2.615 0.408 -0.106 CAP 3J4 24 3J4 H4 H1 H 0 1 N N N 3.383 4.383 79.462 -4.305 -0.931 -1.391 H4 3J4 25 3J4 H61 H2 H 0 1 N N N 4.593 4.637 82.637 -1.835 -1.926 1.269 H61 3J4 26 3J4 H3A H3 H 0 1 N N N -1.394 -0.608 87.382 4.904 -0.371 -1.926 H3A 3J4 27 3J4 H4A H4 H 0 1 N N N -1.629 -0.212 85.815 5.698 -1.787 -1.492 H4A 3J4 28 3J4 HO2 H5 H 0 1 N Y N 0.775 0.632 79.957 -4.865 1.607 -0.276 HO2 3J4 29 3J4 H2 H6 H 0 1 N N N 2.828 0.955 81.061 -3.465 1.161 1.607 H2 3J4 30 3J4 H3 H7 H 0 1 N N N 4.304 1.908 80.485 -3.686 -1.294 1.578 H3 3J4 31 3J4 HO3 H8 H 0 1 N Y N 3.686 1.276 78.363 -6.005 -1.308 0.992 HO3 3J4 32 3J4 HO4 H9 H 0 1 N Y N 5.259 4.915 80.727 -4.368 -3.317 -1.262 HO4 3J4 33 3J4 HO6 H10 H 0 1 N Y N 3.677 5.875 84.287 0.080 -3.247 0.729 HO6 3J4 34 3J4 H1 H11 H 0 1 N N N 1.765 1.715 82.497 -1.434 -0.178 1.198 H1 3J4 35 3J4 H12 H12 H 0 1 N N N -0.822 0.892 83.989 2.128 2.243 0.970 H12 3J4 36 3J4 H13 H13 H 0 1 N N N 0.830 1.556 83.748 1.282 0.788 1.579 H13 3J4 37 3J4 H14 H14 H 0 1 N N N -0.154 4.524 82.849 0.438 0.625 -2.116 H14 3J4 38 3J4 H15 H15 H 0 1 N N N -1.809 4.159 83.443 0.908 2.347 -2.156 H15 3J4 39 3J4 H16 H16 H 0 1 N N N 0.810 4.150 84.922 2.731 0.250 -2.284 H16 3J4 40 3J4 H17 H17 H 0 1 N N N -0.844 4.519 85.516 3.138 1.876 -1.645 H17 3J4 41 3J4 H18 H18 H 0 1 N N N 0.465 2.354 85.932 2.288 -0.631 -0.090 H18 3J4 42 3J4 H5 H19 H 0 1 N N N 2.375 5.154 80.956 -2.195 -2.157 -1.752 H5 3J4 43 3J4 H62 H20 H 0 1 N N N 3.783 6.128 82.047 -2.281 -3.423 0.417 H62 3J4 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3J4 O3 C3 SING N N 1 3J4 O2 C2 SING N N 2 3J4 C3 C4 SING N N 3 3J4 C3 C2 SING N N 4 3J4 C4 O4 SING N N 5 3J4 C4 C5 SING N N 6 3J4 C2 C1 SING N N 7 3J4 OAE SAX DOUB N N 8 3J4 OAD SAX DOUB N N 9 3J4 C5 O5 SING N N 10 3J4 C5 C6 SING N N 11 3J4 C1 SAX SING N N 12 3J4 C1 O5 SING N N 13 3J4 SAX NAV SING N N 14 3J4 C6 O6 SING N N 15 3J4 NAV CAL SING N N 16 3J4 NAV CAM SING N N 17 3J4 CAL CAK SING N N 18 3J4 CAM CAP SING N N 19 3J4 CAK CAP SING N N 20 3J4 CAP OAO SING N N 21 3J4 OAO SAW SING N N 22 3J4 NAA SAW SING N N 23 3J4 SAW OAB DOUB N N 24 3J4 SAW OAC DOUB N N 25 3J4 C4 H4 SING N N 26 3J4 C6 H61 SING N N 27 3J4 NAA H3A SING N N 28 3J4 NAA H4A SING N N 29 3J4 O2 HO2 SING N N 30 3J4 C2 H2 SING N N 31 3J4 C3 H3 SING N N 32 3J4 O3 HO3 SING N N 33 3J4 O4 HO4 SING N N 34 3J4 O6 HO6 SING N N 35 3J4 C1 H1 SING N N 36 3J4 CAM H12 SING N N 37 3J4 CAM H13 SING N N 38 3J4 CAL H14 SING N N 39 3J4 CAL H15 SING N N 40 3J4 CAK H16 SING N N 41 3J4 CAK H17 SING N N 42 3J4 CAP H18 SING N N 43 3J4 C5 H5 SING N N 44 3J4 C6 H62 SING N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3J4 SMILES ACDLabs 12.01 "O=S(=O)(N1CCC(OS(=O)(=O)N)C1)C2OC(C(O)C(O)C2O)CO" 3J4 InChI InChI 1.03 "InChI=1S/C10H20N2O10S2/c11-24(19,20)22-5-1-2-12(3-5)23(17,18)10-9(16)8(15)7(14)6(4-13)21-10/h5-10,13-16H,1-4H2,(H2,11,19,20)/t5-,6?,7-,8+,9+,10+/m1/s1" 3J4 InChIKey InChI 1.03 TWZVGIAZMOMKML-NGXNFIGVSA-N 3J4 SMILES_CANONICAL CACTVS 3.385 "N[S](=O)(=O)O[C@@H]1CCN(C1)[S](=O)(=O)[C@@H]2O[C@@H](CO)[C@@H](O)[C@H](O)[C@@H]2O" 3J4 SMILES CACTVS 3.385 "N[S](=O)(=O)O[CH]1CCN(C1)[S](=O)(=O)[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O" 3J4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1CN(C[C@@H]1OS(=O)(=O)N)S(=O)(=O)[C@H]2[C@H]([C@H]([C@@H](C(O2)CO)O)O)O" 3J4 SMILES "OpenEye OEToolkits" 1.7.6 "C1CN(CC1OS(=O)(=O)N)S(=O)(=O)C2C(C(C(C(O2)CO)O)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3J4 "SYSTEMATIC NAME" ACDLabs 12.01 "(6S)-2,6-anhydro-6-{[(3R)-3-(sulfamoyloxy)pyrrolidin-1-yl]sulfonyl}-D-glucitol" 3J4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(3R)-1-[(2S,3S,4S,5S)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfonylpyrrolidin-3-yl] sulfamate" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 3J4 "CARBOHYDRATE ISOMER" L PDB ? 3J4 "CARBOHYDRATE RING" pyranose PDB ? 3J4 "CARBOHYDRATE ANOMER" alpha PDB ? 3J4 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3J4 "Create component" 2014-08-25 RCSB 3J4 "Modify name" 2014-10-06 RCSB 3J4 "Modify value order" 2014-10-06 RCSB 3J4 "Initial release" 2014-10-15 RCSB 3J4 "Other modification" 2020-07-03 RCSB 3J4 "Modify internal type" 2020-07-17 RCSB 3J4 "Modify linking type" 2020-07-17 RCSB 3J4 "Modify atom id" 2020-07-17 RCSB 3J4 "Modify component atom id" 2020-07-17 RCSB 3J4 "Modify leaving atom flag" 2020-07-17 RCSB ##