data_3L4 # _chem_comp.id 3L4 _chem_comp.name "[(2-{[2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethyl][(E)-2-phosphonoethenyl]amino}ethoxy)methyl]phosphonic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H20 N6 O8 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-09-11 _chem_comp.pdbx_modified_date 2015-01-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 438.270 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3L4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4RAC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3L4 OAG OAG O 0 1 N N N -22.151 24.317 -36.414 1.105 -3.521 -0.461 OAG 3L4 1 3L4 PBB PBB P 0 1 N N N -23.221 25.341 -36.875 2.671 -3.272 -0.742 PBB 3L4 2 3L4 OAH OAH O 0 1 N N N -22.950 26.782 -36.323 3.384 -4.675 -1.084 OAH 3L4 3 3L4 OAD OAD O 0 1 N N N -24.543 24.867 -36.461 2.826 -2.348 -1.887 OAD 3L4 4 3L4 CAP CAP C 0 1 N N N -23.222 25.433 -38.730 3.445 -2.542 0.738 CAP 3L4 5 3L4 OAT OAT O 0 1 N N N -23.517 24.273 -39.437 2.812 -1.297 1.042 OAT 3L4 6 3L4 CAJ CAJ C 0 1 N N N -22.985 24.202 -40.713 1.517 -1.432 1.632 CAJ 3L4 7 3L4 CAK CAK C 0 1 N N N -22.875 22.841 -41.422 0.938 -0.045 1.913 CAK 3L4 8 3L4 NAY NAY N 0 1 N N N -24.102 22.244 -41.832 0.715 0.657 0.646 NAY 3L4 9 3L4 CAM CAM C 0 1 N N N -23.975 21.494 -43.139 1.722 1.444 0.101 CAM 3L4 10 3L4 CAO CAO C 0 1 N N N -22.982 20.404 -43.298 2.880 1.558 0.725 CAO 3L4 11 3L4 PBA PBA P 0 1 N N N -22.550 19.928 -45.015 4.195 2.585 0.013 PBA 3L4 12 3L4 OAE OAE O 0 1 N N N -21.405 18.862 -45.071 3.682 3.232 -1.369 OAE 3L4 13 3L4 OAF OAF O 0 1 N N N -23.814 19.334 -45.691 4.577 3.759 1.046 OAF 3L4 14 3L4 OAC OAC O 0 1 N N N -22.044 21.158 -45.739 5.388 1.749 -0.246 OAC 3L4 15 3L4 CAL CAL C 0 1 N N N -24.589 21.302 -40.742 -0.570 0.530 -0.046 CAL 3L4 16 3L4 CAN CAN C 0 1 N N N -25.995 20.745 -40.989 -1.520 1.629 0.435 CAN 3L4 17 3L4 N9 N9 N 0 1 Y N N -26.222 19.384 -40.694 -2.805 1.501 -0.257 N9 3L4 18 3L4 C4 C4 C 0 1 Y N N -26.568 18.893 -39.448 -3.845 0.691 0.110 C4 3L4 19 3L4 N3 N3 N 0 1 N N N -26.777 19.489 -38.210 -4.045 -0.174 1.111 N3 3L4 20 3L4 C2 C2 C 0 1 N N N -27.104 18.748 -37.152 -5.176 -0.834 1.222 C2 3L4 21 3L4 N2 N2 N 0 1 N N N -27.310 19.380 -35.869 -5.337 -1.710 2.266 N2 3L4 22 3L4 N1 N1 N 0 1 N N N -27.243 17.420 -37.269 -6.195 -0.674 0.331 N1 3L4 23 3L4 C6 C6 C 0 1 N N N -27.053 16.777 -38.441 -6.065 0.182 -0.707 C6 3L4 24 3L4 O6 O6 O 0 1 N N N -27.208 15.399 -38.529 -6.970 0.332 -1.511 O6 3L4 25 3L4 C5 C5 C 0 1 Y N N -26.699 17.546 -39.582 -4.853 0.900 -0.839 C5 3L4 26 3L4 N7 N7 N 0 1 Y N N -26.432 17.233 -40.914 -4.388 1.813 -1.726 N7 3L4 27 3L4 C8 C8 C 0 1 Y N N -26.145 18.358 -41.565 -3.185 2.173 -1.383 C8 3L4 28 3L4 H1 H1 H 0 1 N N N -22.575 23.598 -35.961 0.928 -4.119 0.278 H1 3L4 29 3L4 H2 H2 H 0 1 N N N -23.701 27.076 -35.821 3.022 -5.121 -1.862 H2 3L4 30 3L4 H3 H3 H 0 1 N N N -22.220 25.762 -39.043 3.331 -3.223 1.582 H3 3L4 31 3L4 H4 H4 H 0 1 N N N -23.964 26.192 -39.020 4.505 -2.373 0.548 H4 3L4 32 3L4 H5 H5 H 0 1 N N N -21.967 24.615 -40.657 0.860 -1.969 0.947 H5 3L4 33 3L4 H6 H6 H 0 1 N N N -23.607 24.845 -41.353 1.600 -1.987 2.566 H6 3L4 34 3L4 H7 H7 H 0 1 N N N -22.376 22.143 -40.733 -0.009 -0.147 2.443 H7 3L4 35 3L4 H8 H8 H 0 1 N N N -22.253 22.979 -42.319 1.637 0.524 2.525 H8 3L4 36 3L4 H9 H9 H 0 1 N N N -24.616 21.756 -43.968 1.558 1.961 -0.833 H9 3L4 37 3L4 H10 H10 H 0 1 N N N -22.536 19.915 -42.445 3.044 1.041 1.658 H10 3L4 38 3L4 H11 H11 H 0 1 N N N -20.661 19.221 -45.540 2.901 3.795 -1.274 H11 3L4 39 3L4 H12 H12 H 0 1 N N N -24.045 19.859 -46.449 5.276 4.349 0.731 H12 3L4 40 3L4 H13 H13 H 0 1 N N N -23.888 20.457 -40.675 -0.415 0.627 -1.121 H13 3L4 41 3L4 H14 H14 H 0 1 N N N -24.595 21.849 -39.788 -1.004 -0.446 0.171 H14 3L4 42 3L4 H15 H15 H 0 1 N N N -26.694 21.335 -40.378 -1.674 1.531 1.509 H15 3L4 43 3L4 H16 H16 H 0 1 N N N -26.225 20.893 -42.055 -1.085 2.605 0.218 H16 3L4 44 3L4 H17 H17 H 0 1 N N N -27.207 20.370 -35.777 -4.621 -1.834 2.909 H17 3L4 45 3L4 H18 H18 H 0 1 N N N -27.556 18.827 -35.073 -6.166 -2.204 2.362 H18 3L4 46 3L4 H19 H19 H 0 1 N N N -27.496 16.888 -36.461 -7.017 -1.176 0.441 H19 3L4 47 3L4 H20 H20 H 0 1 N N N -25.893 18.436 -42.612 -2.577 2.890 -1.914 H20 3L4 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3L4 OAC PBA DOUB N N 1 3L4 OAF PBA SING N N 2 3L4 OAE PBA SING N N 3 3L4 PBA CAO SING N N 4 3L4 CAO CAM DOUB N E 5 3L4 CAM NAY SING N N 6 3L4 NAY CAK SING N N 7 3L4 NAY CAL SING N N 8 3L4 C8 N7 DOUB Y N 9 3L4 C8 N9 SING Y N 10 3L4 CAK CAJ SING N N 11 3L4 CAN CAL SING N N 12 3L4 CAN N9 SING N N 13 3L4 N7 C5 SING Y N 14 3L4 CAJ OAT SING N N 15 3L4 N9 C4 SING Y N 16 3L4 C5 C4 DOUB Y N 17 3L4 C5 C6 SING N N 18 3L4 C4 N3 SING N N 19 3L4 OAT CAP SING N N 20 3L4 CAP PBB SING N N 21 3L4 O6 C6 DOUB N N 22 3L4 C6 N1 SING N N 23 3L4 N3 C2 DOUB N N 24 3L4 N1 C2 SING N N 25 3L4 C2 N2 SING N N 26 3L4 PBB OAD DOUB N N 27 3L4 PBB OAG SING N N 28 3L4 PBB OAH SING N N 29 3L4 OAG H1 SING N N 30 3L4 OAH H2 SING N N 31 3L4 CAP H3 SING N N 32 3L4 CAP H4 SING N N 33 3L4 CAJ H5 SING N N 34 3L4 CAJ H6 SING N N 35 3L4 CAK H7 SING N N 36 3L4 CAK H8 SING N N 37 3L4 CAM H9 SING N N 38 3L4 CAO H10 SING N N 39 3L4 OAE H11 SING N N 40 3L4 OAF H12 SING N N 41 3L4 CAL H13 SING N N 42 3L4 CAL H14 SING N N 43 3L4 CAN H15 SING N N 44 3L4 CAN H16 SING N N 45 3L4 N2 H17 SING N N 46 3L4 N2 H18 SING N N 47 3L4 N1 H19 SING N N 48 3L4 C8 H20 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3L4 SMILES ACDLabs 12.01 "O=P(O)(O)/C=C/N(CCOCP(=O)(O)O)CCn1c2N=C(NC(=O)c2nc1)N" 3L4 InChI InChI 1.03 "InChI=1S/C12H20N6O8P2/c13-12-15-10-9(11(19)16-12)14-7-18(10)2-1-17(4-6-27(20,21)22)3-5-26-8-28(23,24)25/h4,6-7H,1-3,5,8H2,(H2,20,21,22)(H2,23,24,25)(H3,13,15,16,19)/b6-4+" 3L4 InChIKey InChI 1.03 HGNAMUIMUCHWJL-GQCTYLIASA-N 3L4 SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(CCN(CCOC[P](O)(O)=O)/C=C/[P](O)(O)=O)cnc2C(=O)N1" 3L4 SMILES CACTVS 3.385 "NC1=Nc2n(CCN(CCOC[P](O)(O)=O)C=C[P](O)(O)=O)cnc2C(=O)N1" 3L4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc2c(n1CCN(CCOCP(=O)(O)O)/C=C/P(=O)(O)O)N=C(NC2=O)N" 3L4 SMILES "OpenEye OEToolkits" 1.7.6 "c1nc2c(n1CCN(CCOCP(=O)(O)O)C=CP(=O)(O)O)N=C(NC2=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3L4 "SYSTEMATIC NAME" ACDLabs 12.01 "[(2-{[2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)ethyl][(E)-2-phosphonoethenyl]amino}ethoxy)methyl]phosphonic acid" 3L4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[2-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)ethyl-[(E)-2-phosphonoethenyl]amino]ethoxymethylphosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3L4 "Create component" 2014-09-11 RCSB 3L4 "Initial release" 2015-01-07 RCSB #