data_3L7 # _chem_comp.id 3L7 _chem_comp.name "(2-{[2-(6-oxo-1,6-dihydro-9H-purin-9-yl)ethyl](2-{[(E)-2-phosphonoethenyl]oxy}ethyl)amino}ethyl)phosphonic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H21 N5 O8 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-09-11 _chem_comp.pdbx_modified_date 2015-01-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 437.282 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3L7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4RAO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3L7 OAD OAD O 0 1 N N N 22.653 12.169 14.376 -7.332 1.199 -0.076 OAD 3L7 1 3L7 PBA PBA P 0 1 N N N 22.534 11.057 15.525 -6.032 1.863 -0.321 PBA 3L7 2 3L7 OAE OAE O 0 1 N N N 21.468 10.018 15.123 -6.030 2.510 -1.796 OAE 3L7 3 3L7 OAB OAB O 0 1 N N N 22.136 11.700 16.830 -5.807 3.022 0.774 OAB 3L7 4 3L7 CAP CAP C 0 1 N N N 24.163 10.139 15.725 -4.696 0.643 -0.194 CAP 3L7 5 3L7 CAK CAK C 0 1 N N N 25.461 10.764 15.216 -3.745 0.799 0.703 CAK 3L7 6 3L7 OAU OAU O 0 1 N N N 26.627 10.207 15.682 -2.803 -0.163 0.868 OAU 3L7 7 3L7 CAJ CAJ C 0 1 N N N 27.165 9.126 15.052 -1.867 0.020 1.931 CAJ 3L7 8 3L7 CAL CAL C 0 1 N N N 27.517 9.287 13.579 -0.817 -1.092 1.885 CAL 3L7 9 3L7 NAY NAY N 0 1 N N N 27.521 8.046 12.781 -0.030 -0.971 0.650 NAY 3L7 10 3L7 CAN CAN C 0 1 N N N 28.860 7.450 12.701 0.720 -2.205 0.380 CAN 3L7 11 3L7 CAQ CAQ C 0 1 N N N 28.877 5.945 12.648 -0.234 -3.274 -0.156 CAQ 3L7 12 3L7 PBB PBB P 0 1 N N N 30.472 5.138 12.617 0.669 -4.845 -0.361 PBB 3L7 13 3L7 OAF OAF O 0 1 N N N 31.444 5.868 11.684 1.269 -5.242 0.932 OAF 3L7 14 3L7 OAG OAG O 0 1 N N N 31.063 5.124 14.091 -0.351 -5.990 -0.853 OAG 3L7 15 3L7 OAC OAC O 0 1 N N N 30.306 3.744 12.188 1.832 -4.656 -1.458 OAC 3L7 16 3L7 CAM CAM C 0 1 N N N 27.017 8.334 11.416 0.869 0.189 0.710 CAM 3L7 17 3L7 CAO CAO C 0 1 N N N 27.744 9.349 10.621 1.483 0.431 -0.670 CAO 3L7 18 3L7 N9 N9 N 0 1 Y N N 27.558 9.108 9.137 2.380 1.587 -0.610 N9 3L7 19 3L7 C4 C4 C 0 1 Y N N 26.435 9.513 8.408 3.693 1.574 -0.227 C4 3L7 20 3L7 N3 N3 N 0 1 N N N 25.257 10.231 8.767 4.539 0.619 0.184 N3 3L7 21 3L7 C2 C2 C 0 1 N N N 24.329 10.487 7.820 5.774 0.897 0.494 C2 3L7 22 3L7 N1 N1 N 0 1 N N N 24.520 10.071 6.534 6.271 2.157 0.421 N1 3L7 23 3L7 C6 C6 C 0 1 N N N 25.627 9.382 6.116 5.485 3.180 0.016 C6 3L7 24 3L7 O6 O6 O 0 1 N N N 25.771 8.997 4.853 5.923 4.316 -0.054 O6 3L7 25 3L7 C5 C5 C 0 1 Y N N 26.645 9.085 7.113 4.140 2.895 -0.326 C5 3L7 26 3L7 N7 N7 N 0 1 Y N N 27.882 8.418 7.071 3.097 3.641 -0.758 N7 3L7 27 3L7 C8 C8 C 0 1 Y N N 28.403 8.442 8.315 2.060 2.873 -0.932 C8 3L7 28 3L7 H1 H1 H 0 1 N N N 21.101 10.250 14.278 -6.720 3.172 -1.935 H1 3L7 29 3L7 H2 H2 H 0 1 N N N 22.037 12.636 16.705 -4.973 3.500 0.673 H2 3L7 30 3L7 H3 H3 H 0 1 N N N 24.181 9.169 16.200 -4.681 -0.212 -0.854 H3 3L7 31 3L7 H4 H4 H 0 1 N N N 25.462 11.597 14.528 -3.714 1.694 1.307 H4 3L7 32 3L7 H5 H5 H 0 1 N N N 26.441 8.302 15.132 -1.377 0.988 1.821 H5 3L7 33 3L7 H6 H6 H 0 1 N N N 28.088 8.856 15.586 -2.391 -0.015 2.886 H6 3L7 34 3L7 H7 H7 H 0 1 N N N 28.522 9.731 13.519 -0.156 -1.004 2.747 H7 3L7 35 3L7 H8 H8 H 0 1 N N N 26.785 9.975 13.130 -1.314 -2.062 1.905 H8 3L7 36 3L7 H10 H10 H 0 1 N N N 29.430 7.768 13.586 1.495 -2.005 -0.360 H10 3L7 37 3L7 H11 H11 H 0 1 N N N 29.351 7.830 11.793 1.181 -2.558 1.303 H11 3L7 38 3L7 H12 H12 H 0 1 N N N 28.336 5.641 11.739 -1.054 -3.416 0.549 H12 3L7 39 3L7 H13 H13 H 0 1 N N N 28.339 5.578 13.535 -0.633 -2.956 -1.119 H13 3L7 40 3L7 H14 H14 H 0 1 N N N 31.901 5.571 14.101 0.061 -6.854 -0.983 H14 3L7 41 3L7 H15 H15 H 0 1 N N N 30.838 3.584 11.418 1.511 -4.395 -2.332 H15 3L7 42 3L7 H16 H16 H 0 1 N N N 25.976 8.675 11.514 0.305 1.071 1.016 H16 3L7 43 3L7 H17 H17 H 0 1 N N N 27.042 7.391 10.849 1.663 -0.003 1.432 H17 3L7 44 3L7 H18 H18 H 0 1 N N N 28.816 9.296 10.863 2.047 -0.451 -0.976 H18 3L7 45 3L7 H19 H19 H 0 1 N N N 27.360 10.348 10.875 0.690 0.623 -1.393 H19 3L7 46 3L7 H20 H20 H 0 1 N N N 23.430 11.025 8.082 6.423 0.098 0.821 H20 3L7 47 3L7 H21 H21 H 0 1 N N N 23.812 10.281 5.860 7.196 2.326 0.660 H21 3L7 48 3L7 H22 H22 H 0 1 N N N 29.344 8.000 8.608 1.091 3.205 -1.273 H22 3L7 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3L7 O6 C6 DOUB N N 1 3L7 C6 N1 SING N N 2 3L7 C6 C5 SING N N 3 3L7 N1 C2 SING N N 4 3L7 N7 C5 SING Y N 5 3L7 N7 C8 DOUB Y N 6 3L7 C5 C4 DOUB Y N 7 3L7 C2 N3 DOUB N N 8 3L7 C8 N9 SING Y N 9 3L7 C4 N3 SING N N 10 3L7 C4 N9 SING Y N 11 3L7 N9 CAO SING N N 12 3L7 CAO CAM SING N N 13 3L7 CAM NAY SING N N 14 3L7 OAF PBB DOUB N N 15 3L7 OAC PBB SING N N 16 3L7 PBB CAQ SING N N 17 3L7 PBB OAG SING N N 18 3L7 CAQ CAN SING N N 19 3L7 CAN NAY SING N N 20 3L7 NAY CAL SING N N 21 3L7 CAL CAJ SING N N 22 3L7 OAD PBA DOUB N N 23 3L7 CAJ OAU SING N N 24 3L7 OAE PBA SING N N 25 3L7 CAK OAU SING N N 26 3L7 CAK CAP DOUB N E 27 3L7 PBA CAP SING N N 28 3L7 PBA OAB SING N N 29 3L7 OAE H1 SING N N 30 3L7 OAB H2 SING N N 31 3L7 CAP H3 SING N N 32 3L7 CAK H4 SING N N 33 3L7 CAJ H5 SING N N 34 3L7 CAJ H6 SING N N 35 3L7 CAL H7 SING N N 36 3L7 CAL H8 SING N N 37 3L7 CAN H10 SING N N 38 3L7 CAN H11 SING N N 39 3L7 CAQ H12 SING N N 40 3L7 CAQ H13 SING N N 41 3L7 OAG H14 SING N N 42 3L7 OAC H15 SING N N 43 3L7 CAM H16 SING N N 44 3L7 CAM H17 SING N N 45 3L7 CAO H18 SING N N 46 3L7 CAO H19 SING N N 47 3L7 C2 H20 SING N N 48 3L7 N1 H21 SING N N 49 3L7 C8 H22 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3L7 SMILES ACDLabs 12.01 "O=P(O)(O)/C=C/OCCN(CCP(=O)(O)O)CCn1c2N=CNC(=O)c2nc1" 3L7 InChI InChI 1.03 "InChI=1S/C13H21N5O8P2/c19-13-11-12(14-9-15-13)18(10-16-11)2-1-17(4-7-27(20,21)22)3-5-26-6-8-28(23,24)25/h6,8-10H,1-5,7H2,(H,14,15,19)(H2,20,21,22)(H2,23,24,25)/b8-6+" 3L7 InChIKey InChI 1.03 SGNFOZIWXPTVIN-SOFGYWHQSA-N 3L7 SMILES_CANONICAL CACTVS 3.385 "O[P](O)(=O)CCN(CCO\C=C\[P](O)(O)=O)CCn1cnc2C(=O)NC=Nc12" 3L7 SMILES CACTVS 3.385 "O[P](O)(=O)CCN(CCOC=C[P](O)(O)=O)CCn1cnc2C(=O)NC=Nc12" 3L7 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1nc2c(n1CCN(CCO/C=C/P(=O)(O)O)CCP(=O)(O)O)N=CNC2=O" 3L7 SMILES "OpenEye OEToolkits" 1.7.6 "c1nc2c(n1CCN(CCOC=CP(=O)(O)O)CCP(=O)(O)O)N=CNC2=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3L7 "SYSTEMATIC NAME" ACDLabs 12.01 "(2-{[2-(6-oxo-1,6-dihydro-9H-purin-9-yl)ethyl](2-{[(E)-2-phosphonoethenyl]oxy}ethyl)amino}ethyl)phosphonic acid" 3L7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[2-(6-oxidanylidene-1H-purin-9-yl)ethyl-[2-[(E)-2-phosphonoethenoxy]ethyl]amino]ethylphosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3L7 "Create component" 2014-09-11 RCSB 3L7 "Initial release" 2015-01-07 RCSB #