data_3LI # _chem_comp.id 3LI _chem_comp.name "(4R)-3-(4-[4-(2-chlorophenyl)piperazin-1-yl]-6-{[2-methyl-6-(methylcarbamoyl)phenyl]amino}-1,3,5-triazin-2-yl)-N-[2-(hydroxyamino)-2-oxoethyl]-1,3-thiazolidine-4-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H33 Cl N10 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-07-12 _chem_comp.pdbx_modified_date 2011-07-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 641.144 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3LI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3STR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3LI C01 C01 C 0 1 N N N 27.236 -12.808 9.535 2.184 -5.381 2.206 C01 3LI 1 3LI N02 N02 N 0 1 N N N 25.826 -12.532 9.598 1.034 -5.260 1.306 N02 3LI 2 3LI C03 C03 C 0 1 N N N 25.171 -12.104 8.480 1.029 -4.316 0.343 C03 3LI 3 3LI O04 O04 O 0 1 N N N 25.658 -11.933 7.372 1.978 -3.566 0.222 O04 3LI 4 3LI C05 C05 C 0 1 Y N N 23.750 -11.863 8.693 -0.129 -4.194 -0.562 C05 3LI 5 3LI C06 C06 C 0 1 Y N N 22.880 -12.913 8.525 -1.165 -5.128 -0.508 C06 3LI 6 3LI C07 C07 C 0 1 Y N N 21.541 -12.689 8.722 -2.244 -5.008 -1.357 C07 3LI 7 3LI C08 C08 C 0 1 Y N N 21.100 -11.438 9.082 -2.307 -3.964 -2.266 C08 3LI 8 3LI C09 C09 C 0 1 Y N N 21.987 -10.398 9.242 -1.291 -3.033 -2.331 C09 3LI 9 3LI C10 C10 C 0 1 N N N 21.481 -9.055 9.633 -1.369 -1.902 -3.324 C10 3LI 10 3LI C11 C11 C 0 1 Y N N 23.330 -10.604 9.044 -0.198 -3.134 -1.480 C11 3LI 11 3LI N12 N12 N 0 1 N N N 24.250 -9.565 9.213 0.825 -2.194 -1.541 N12 3LI 12 3LI C13 C13 C 0 1 Y N N 24.335 -8.493 8.322 0.555 -0.861 -1.291 C13 3LI 13 3LI N14 N14 N 0 1 Y N N 25.244 -7.548 8.580 1.548 0.021 -1.246 N14 3LI 14 3LI C15 C15 C 0 1 Y N N 25.303 -6.533 7.712 1.288 1.303 -1.006 C15 3LI 15 3LI N16 N16 N 0 1 Y N N 24.510 -6.459 6.646 0.035 1.701 -0.811 N16 3LI 16 3LI C17 C17 C 0 1 Y N N 23.625 -7.444 6.462 -0.958 0.819 -0.856 C17 3LI 17 3LI N18 N18 N 0 1 Y N N 23.508 -8.487 7.281 -0.699 -0.462 -1.101 N18 3LI 18 3LI N19 N19 N 0 1 N N N 22.787 -7.403 5.338 -2.259 1.232 -0.652 N19 3LI 19 3LI C20 C20 C 0 1 N N N 21.605 -8.224 5.443 -3.209 0.153 -0.958 C20 3LI 20 3LI C21 C21 C 0 1 N N N 21.069 -8.400 4.039 -4.639 0.675 -0.797 C21 3LI 21 3LI N22 N22 N 0 1 N N N 20.871 -7.092 3.439 -4.827 1.166 0.575 N22 3LI 22 3LI C23 C23 C 0 1 N N N 22.069 -6.281 3.366 -3.877 2.245 0.881 C23 3LI 23 3LI C24 C24 C 0 1 N N N 22.597 -6.084 4.774 -2.447 1.723 0.720 C24 3LI 24 3LI C25 C25 C 0 1 Y N N 20.302 -7.259 2.166 -6.144 1.585 0.781 C25 3LI 25 3LI C26 C26 C 0 1 Y N N 20.604 -8.361 1.401 -6.678 2.608 0.009 C26 3LI 26 3LI C27 C27 C 0 1 Y N N 20.041 -8.524 0.157 -7.981 3.019 0.214 C27 3LI 27 3LI C28 C28 C 0 1 Y N N 19.162 -7.589 -0.334 -8.753 2.415 1.188 C28 3LI 28 3LI C29 C29 C 0 1 Y N N 18.849 -6.488 0.423 -8.225 1.396 1.960 C29 3LI 29 3LI C30 C30 C 0 1 Y N N 19.422 -6.333 1.662 -6.925 0.975 1.756 C30 3LI 30 3LI CL31 CL31 CL 0 0 N N N 19.016 -4.949 2.594 -6.266 -0.310 2.720 CL31 3LI 31 3LI N32 N32 N 0 1 N N N 26.250 -5.510 7.923 2.319 2.219 -0.959 N32 3LI 32 3LI C33 C33 C 0 1 N N N 26.612 -5.441 9.324 2.139 3.273 -1.983 C33 3LI 33 3LI S34 S34 S 0 1 N N N 26.390 -3.744 9.906 3.870 3.787 -2.340 S34 3LI 34 3LI C35 C35 C 0 1 N N N 26.325 -3.105 8.214 4.561 2.100 -2.076 C35 3LI 35 3LI C36 C36 C 0 1 N N R 25.764 -4.244 7.379 3.615 1.549 -0.985 C36 3LI 36 3LI C37 C37 C 0 1 N N N 26.276 -4.057 5.983 4.275 1.719 0.359 C37 3LI 37 3LI O38 O38 O 0 1 N N N 25.657 -3.403 5.159 3.711 2.336 1.238 O38 3LI 38 3LI N39 N39 N 0 1 N N N 27.480 -4.664 5.728 5.491 1.184 0.585 N39 3LI 39 3LI C40 C40 C 0 1 N N N 28.063 -4.431 4.428 6.133 1.349 1.891 C40 3LI 40 3LI C41 C41 C 0 1 N N N 29.364 -3.729 4.652 7.474 0.662 1.882 C41 3LI 41 3LI O42 O42 O 0 1 N N N 30.430 -4.320 4.712 7.857 0.092 0.883 O42 3LI 42 3LI N43 N43 N 0 1 N N N 29.243 -2.372 4.788 8.249 0.683 2.985 N43 3LI 43 3LI O44 O44 O 0 1 N N N 30.501 -1.828 5.147 9.510 0.038 2.977 O44 3LI 44 3LI H01 H01 H 0 1 N N N 27.590 -13.139 10.522 3.080 -5.594 1.623 H01 3LI 45 3LI H01A H01A H 0 0 N N N 27.422 -13.600 8.794 2.319 -4.447 2.751 H01A 3LI 46 3LI H01B H01B H 0 0 N N N 27.775 -11.896 9.240 2.008 -6.193 2.912 H01B 3LI 47 3LI HN02 HN02 H 0 0 N N N 25.328 -12.653 10.457 0.277 -5.858 1.403 HN02 3LI 48 3LI H06 H06 H 0 1 N N N 23.242 -13.891 8.245 -1.121 -5.944 0.198 H06 3LI 49 3LI H07 H07 H 0 1 N N N 20.834 -13.495 8.594 -3.045 -5.732 -1.314 H07 3LI 50 3LI H08 H08 H 0 1 N N N 20.045 -11.269 9.241 -3.157 -3.879 -2.927 H08 3LI 51 3LI H10 H10 H 0 1 N N N 21.467 -8.973 10.730 -1.724 -1.002 -2.821 H10 3LI 52 3LI H10A H10A H 0 0 N N N 22.140 -8.279 9.216 -0.380 -1.717 -3.744 H10A 3LI 53 3LI H10B H10B H 0 0 N N N 20.462 -8.919 9.242 -2.060 -2.168 -4.124 H10B 3LI 54 3LI HN12 HN12 H 0 0 N N N 24.868 -9.590 9.999 1.728 -2.473 -1.758 HN12 3LI 55 3LI H20 H20 H 0 1 N N N 21.855 -9.201 5.883 -3.058 -0.185 -1.983 H20 3LI 56 3LI H20A H20A H 0 0 N N N 20.854 -7.735 6.081 -3.046 -0.679 -0.273 H20A 3LI 57 3LI H21 H21 H 0 1 N N N 21.789 -8.976 3.439 -4.810 1.489 -1.501 H21 3LI 58 3LI H21A H21A H 0 0 N N N 20.111 -8.939 4.075 -5.345 -0.132 -0.995 H21A 3LI 59 3LI H23 H23 H 0 1 N N N 22.827 -6.788 2.750 -4.040 3.077 0.195 H23 3LI 60 3LI H23A H23A H 0 0 N N N 21.833 -5.306 2.915 -4.028 2.583 1.906 H23A 3LI 61 3LI H24 H24 H 0 1 N N N 21.877 -5.510 5.376 -2.276 0.909 1.424 H24 3LI 62 3LI H24A H24A H 0 0 N N N 23.551 -5.536 4.752 -1.742 2.530 0.917 H24A 3LI 63 3LI H26 H26 H 0 1 N N N 21.289 -9.105 1.780 -6.075 3.081 -0.752 H26 3LI 64 3LI H27 H27 H 0 1 N N N 20.291 -9.391 -0.437 -8.396 3.815 -0.387 H27 3LI 65 3LI H28 H28 H 0 1 N N N 18.720 -7.720 -1.311 -9.771 2.739 1.347 H28 3LI 66 3LI H29 H29 H 0 1 N N N 18.157 -5.749 0.047 -8.831 0.926 2.720 H29 3LI 67 3LI H33 H33 H 0 1 N N N 25.969 -6.118 9.906 1.664 2.867 -2.877 H33 3LI 68 3LI H33A H33A H 0 0 N N N 27.663 -5.740 9.449 1.563 4.107 -1.583 H33A 3LI 69 3LI H35 H35 H 0 1 N N N 25.677 -2.218 8.154 4.497 1.504 -2.987 H35 3LI 70 3LI H35A H35A H 0 0 N N N 27.327 -2.818 7.864 5.588 2.150 -1.715 H35A 3LI 71 3LI H36 H36 H 0 1 N N N 24.664 -4.252 7.389 3.457 0.486 -1.163 H36 3LI 72 3LI HN39 HN39 H 0 0 N N N 27.932 -5.240 6.410 5.942 0.691 -0.118 HN39 3LI 73 3LI H40 H40 H 0 1 N N N 28.229 -5.386 3.907 6.269 2.410 2.098 H40 3LI 74 3LI H40A H40A H 0 0 N N N 27.394 -3.809 3.816 5.503 0.906 2.663 H40A 3LI 75 3LI HN43 HN43 H 0 0 N N N 28.401 -1.849 4.655 7.943 1.139 3.784 HN43 3LI 76 3LI HO44 HO44 H 0 0 N N N 31.151 -2.520 5.169 9.992 0.106 3.812 HO44 3LI 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3LI C01 N02 SING N N 1 3LI N02 C03 SING N N 2 3LI C03 O04 DOUB N N 3 3LI C03 C05 SING N N 4 3LI C05 C06 DOUB Y N 5 3LI C05 C11 SING Y N 6 3LI C06 C07 SING Y N 7 3LI C07 C08 DOUB Y N 8 3LI C08 C09 SING Y N 9 3LI C09 C10 SING N N 10 3LI C09 C11 DOUB Y N 11 3LI C11 N12 SING N N 12 3LI N12 C13 SING N N 13 3LI C13 N14 DOUB Y N 14 3LI C13 N18 SING Y N 15 3LI N14 C15 SING Y N 16 3LI C15 N16 DOUB Y N 17 3LI C15 N32 SING N N 18 3LI N16 C17 SING Y N 19 3LI C17 N18 DOUB Y N 20 3LI C17 N19 SING N N 21 3LI N19 C20 SING N N 22 3LI N19 C24 SING N N 23 3LI C20 C21 SING N N 24 3LI C21 N22 SING N N 25 3LI N22 C23 SING N N 26 3LI N22 C25 SING N N 27 3LI C23 C24 SING N N 28 3LI C25 C26 DOUB Y N 29 3LI C25 C30 SING Y N 30 3LI C26 C27 SING Y N 31 3LI C27 C28 DOUB Y N 32 3LI C28 C29 SING Y N 33 3LI C29 C30 DOUB Y N 34 3LI C30 CL31 SING N N 35 3LI N32 C33 SING N N 36 3LI N32 C36 SING N N 37 3LI C33 S34 SING N N 38 3LI S34 C35 SING N N 39 3LI C35 C36 SING N N 40 3LI C36 C37 SING N N 41 3LI C37 O38 DOUB N N 42 3LI C37 N39 SING N N 43 3LI N39 C40 SING N N 44 3LI C40 C41 SING N N 45 3LI C41 O42 DOUB N N 46 3LI C41 N43 SING N N 47 3LI N43 O44 SING N N 48 3LI C01 H01 SING N N 49 3LI C01 H01A SING N N 50 3LI C01 H01B SING N N 51 3LI N02 HN02 SING N N 52 3LI C06 H06 SING N N 53 3LI C07 H07 SING N N 54 3LI C08 H08 SING N N 55 3LI C10 H10 SING N N 56 3LI C10 H10A SING N N 57 3LI C10 H10B SING N N 58 3LI N12 HN12 SING N N 59 3LI C20 H20 SING N N 60 3LI C20 H20A SING N N 61 3LI C21 H21 SING N N 62 3LI C21 H21A SING N N 63 3LI C23 H23 SING N N 64 3LI C23 H23A SING N N 65 3LI C24 H24 SING N N 66 3LI C24 H24A SING N N 67 3LI C26 H26 SING N N 68 3LI C27 H27 SING N N 69 3LI C28 H28 SING N N 70 3LI C29 H29 SING N N 71 3LI C33 H33 SING N N 72 3LI C33 H33A SING N N 73 3LI C35 H35 SING N N 74 3LI C35 H35A SING N N 75 3LI C36 H36 SING N N 76 3LI N39 HN39 SING N N 77 3LI C40 H40 SING N N 78 3LI C40 H40A SING N N 79 3LI N43 HN43 SING N N 80 3LI O44 HO44 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3LI SMILES ACDLabs 12.01 "Clc1ccccc1N5CCN(c2nc(nc(n2)N3C(C(=O)NCC(=O)NO)CSC3)Nc4c(cccc4C(=O)NC)C)CC5" 3LI InChI InChI 1.03 "InChI=1S/C28H33ClN10O4S/c1-17-6-5-7-18(24(41)30-2)23(17)32-26-33-27(38-12-10-37(11-13-38)20-9-4-3-8-19(20)29)35-28(34-26)39-16-44-15-21(39)25(42)31-14-22(40)36-43/h3-9,21,43H,10-16H2,1-2H3,(H,30,41)(H,31,42)(H,36,40)(H,32,33,34,35)/t21-/m0/s1" 3LI InChIKey InChI 1.03 VJGKWQWGYXBKEJ-NRFANRHFSA-N 3LI SMILES_CANONICAL CACTVS 3.370 "CNC(=O)c1cccc(C)c1Nc2nc(nc(n2)N3CSC[C@H]3C(=O)NCC(=O)NO)N4CCN(CC4)c5ccccc5Cl" 3LI SMILES CACTVS 3.370 "CNC(=O)c1cccc(C)c1Nc2nc(nc(n2)N3CSC[CH]3C(=O)NCC(=O)NO)N4CCN(CC4)c5ccccc5Cl" 3LI SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "Cc1cccc(c1Nc2nc(nc(n2)N3CCN(CC3)c4ccccc4Cl)[N@@]5CSC[C@H]5C(=O)NCC(=O)NO)C(=O)NC" 3LI SMILES "OpenEye OEToolkits" 1.7.2 "Cc1cccc(c1Nc2nc(nc(n2)N3CSCC3C(=O)NCC(=O)NO)N4CCN(CC4)c5ccccc5Cl)C(=O)NC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3LI "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-3-(4-[4-(2-chlorophenyl)piperazin-1-yl]-6-{[2-methyl-6-(methylcarbamoyl)phenyl]amino}-1,3,5-triazin-2-yl)-N-[2-(hydroxyamino)-2-oxoethyl]-1,3-thiazolidine-4-carboxamide" 3LI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(3R,4R)-3-[4-[4-(2-chlorophenyl)piperazin-1-yl]-6-[[2-methyl-6-(methylcarbamoyl)phenyl]amino]-1,3,5-triazin-2-yl]-N-[2-(oxidanylamino)-2-oxidanylidene-ethyl]-1,3-thiazolidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3LI "Create component" 2011-07-12 RCSB #