data_3LN # _chem_comp.id 3LN _chem_comp.name "(4S)-2'-(2,2-dimethylpropoxy)-7'-(pyrimidin-5-yl)spiro[1,3-oxazole-4,9'-xanthen]-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H24 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-09-16 _chem_comp.pdbx_modified_date 2014-12-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 416.472 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3LN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4RCE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3LN C4 C4 C 0 1 Y N N 71.223 50.223 8.788 1.408 -1.927 -0.336 C4 3LN 1 3LN C14 C14 C 0 1 Y N N 67.177 50.596 9.964 -2.149 0.222 -0.158 C14 3LN 2 3LN C5 C5 C 0 1 Y N N 70.338 49.365 8.135 1.521 -0.543 -0.318 C5 3LN 3 3LN C6 C6 C 0 1 Y N N 70.826 48.542 7.123 2.751 0.045 -0.098 C6 3LN 4 3LN C11 C11 C 0 1 Y N N 69.217 52.119 11.055 -2.129 -2.545 -0.188 C11 3LN 5 3LN C8 C8 C 0 1 Y N N 69.518 51.164 10.104 -0.944 -1.841 -0.364 C8 3LN 6 3LN C9 C9 C 0 1 Y N N 68.498 50.392 9.556 -0.957 -0.454 -0.348 C9 3LN 7 3LN C10 C10 C 0 1 N N S 68.831 49.346 8.500 0.313 0.319 -0.536 C10 3LN 8 3LN C12 C12 C 0 1 Y N N 67.921 52.324 11.470 -3.318 -1.869 0.001 C12 3LN 9 3LN C13 C13 C 0 1 Y N N 66.891 51.569 10.943 -3.330 -0.483 0.016 C13 3LN 10 3LN C3 C3 C 0 1 Y N N 72.564 50.239 8.441 2.535 -2.718 -0.136 C3 3LN 11 3LN C25 C25 C 0 1 Y N N 73.769 46.902 6.020 5.337 1.278 0.353 C25 3LN 12 3LN N26 N26 N 0 1 Y N N 74.188 46.056 5.098 6.532 1.802 0.567 N26 3LN 13 3LN C27 C27 C 0 1 Y N N 73.565 45.952 3.937 7.584 1.032 0.763 C27 3LN 14 3LN N28 N28 N 0 1 Y N N 72.494 46.690 3.670 7.499 -0.284 0.755 N28 3LN 15 3LN C29 C29 C 0 1 Y N N 72.005 47.556 4.550 6.342 -0.889 0.549 C29 3LN 16 3LN C15 C15 C 0 1 Y N N 72.649 47.701 5.774 5.199 -0.112 0.342 C15 3LN 17 3LN C1 C1 C 0 1 Y N N 72.177 48.561 6.765 3.879 -0.746 0.106 C1 3LN 18 3LN C2 C2 C 0 1 Y N N 73.050 49.405 7.435 3.763 -2.135 0.084 C2 3LN 19 3LN O7 O7 O 0 1 N N N 70.838 51.061 9.783 0.211 -2.524 -0.551 O7 3LN 20 3LN O16 O16 O 0 1 N N N 65.645 51.895 11.416 -4.500 0.185 0.203 O16 3LN 21 3LN C22 C22 C 0 1 N N N 64.685 50.895 11.431 -5.678 -0.605 0.376 C22 3LN 22 3LN C23 C23 C 0 1 N N N 63.498 51.422 12.239 -6.885 0.315 0.571 C23 3LN 23 3LN C30 C30 C 0 1 N N N 62.475 51.938 11.234 -6.668 1.186 1.810 C30 3LN 24 3LN C31 C31 C 0 1 N N N 62.978 50.242 13.067 -7.048 1.210 -0.659 C31 3LN 25 3LN C24 C24 C 0 1 N N N 63.884 52.559 13.200 -8.146 -0.531 0.757 C24 3LN 26 3LN C17 C17 C 0 1 N N N 68.373 47.953 8.940 0.354 0.948 -1.944 C17 3LN 27 3LN O18 O18 O 0 1 N N N 67.447 47.516 7.904 -0.155 2.272 -1.674 O18 3LN 28 3LN C19 C19 C 0 1 N N N 67.229 48.561 7.059 0.078 2.546 -0.375 C19 3LN 29 3LN N21 N21 N 0 1 N N N 66.344 48.500 6.077 0.036 3.817 0.143 N21 3LN 30 3LN N20 N20 N 0 1 N N N 67.987 49.625 7.315 0.345 1.496 0.343 N20 3LN 31 3LN H1 H1 H 0 1 N N N 66.379 50.011 9.531 -2.160 1.301 -0.146 H1 3LN 32 3LN H2 H2 H 0 1 N N N 70.149 47.878 6.606 2.839 1.122 -0.085 H2 3LN 33 3LN H3 H3 H 0 1 N N N 70.011 52.715 11.480 -2.120 -3.625 -0.200 H3 3LN 34 3LN H4 H4 H 0 1 N N N 67.708 53.079 12.212 -4.237 -2.420 0.137 H4 3LN 35 3LN H5 H5 H 0 1 N N N 73.241 50.905 8.956 2.446 -3.794 -0.153 H5 3LN 36 3LN H6 H6 H 0 1 N N N 74.290 46.977 6.963 4.479 1.916 0.193 H6 3LN 37 3LN H7 H7 H 0 1 N N N 73.932 45.258 3.196 8.545 1.493 0.935 H7 3LN 38 3LN H8 H8 H 0 1 N N N 71.124 48.137 4.320 6.280 -1.967 0.544 H8 3LN 39 3LN H9 H9 H 0 1 N N N 74.099 49.416 7.179 4.636 -2.753 0.239 H9 3LN 40 3LN H10 H10 H 0 1 N N N 64.368 50.661 10.404 -5.832 -1.225 -0.506 H10 3LN 41 3LN H11 H11 H 0 1 N N N 65.091 49.989 11.905 -5.562 -1.242 1.253 H11 3LN 42 3LN H12 H12 H 0 1 N N N 61.598 52.329 11.771 -5.770 1.788 1.678 H12 3LN 43 3LN H13 H13 H 0 1 N N N 62.925 52.741 10.632 -7.528 1.841 1.949 H13 3LN 44 3LN H14 H14 H 0 1 N N N 62.163 51.116 10.573 -6.552 0.548 2.687 H14 3LN 45 3LN H15 H15 H 0 1 N N N 63.758 49.916 13.771 -7.202 0.589 -1.542 H15 3LN 46 3LN H16 H16 H 0 1 N N N 62.085 50.553 13.628 -7.908 1.865 -0.521 H16 3LN 47 3LN H17 H17 H 0 1 N N N 62.718 49.410 12.396 -6.150 1.812 -0.792 H17 3LN 48 3LN H18 H18 H 0 1 N N N 64.622 52.190 13.927 -8.030 -1.169 1.633 H18 3LN 49 3LN H19 H19 H 0 1 N N N 64.318 53.392 12.627 -9.006 0.124 0.895 H19 3LN 50 3LN H20 H20 H 0 1 N N N 62.988 52.909 13.733 -8.301 -1.152 -0.126 H20 3LN 51 3LN H21 H21 H 0 1 N N N 67.867 48.003 9.915 1.374 0.991 -2.325 H21 3LN 52 3LN H22 H22 H 0 1 N N N 69.230 47.267 9.007 -0.297 0.410 -2.632 H22 3LN 53 3LN H23 H23 H 0 1 N N N 66.213 49.286 5.472 0.212 3.963 1.086 H23 3LN 54 3LN H24 H24 H 0 1 N N N 65.806 47.668 5.940 -0.168 4.569 -0.434 H24 3LN 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3LN N28 C27 DOUB Y N 1 3LN N28 C29 SING Y N 2 3LN C27 N26 SING Y N 3 3LN C29 C15 DOUB Y N 4 3LN N26 C25 DOUB Y N 5 3LN C15 C25 SING Y N 6 3LN C15 C1 SING N N 7 3LN N21 C19 SING N N 8 3LN C1 C6 DOUB Y N 9 3LN C1 C2 SING Y N 10 3LN C19 N20 DOUB N N 11 3LN C19 O18 SING N N 12 3LN C6 C5 SING Y N 13 3LN N20 C10 SING N N 14 3LN C2 C3 DOUB Y N 15 3LN O18 C17 SING N N 16 3LN C5 C10 SING N N 17 3LN C5 C4 DOUB Y N 18 3LN C3 C4 SING Y N 19 3LN C10 C17 SING N N 20 3LN C10 C9 SING N N 21 3LN C4 O7 SING N N 22 3LN C9 C14 DOUB Y N 23 3LN C9 C8 SING Y N 24 3LN O7 C8 SING N N 25 3LN C14 C13 SING Y N 26 3LN C8 C11 DOUB Y N 27 3LN C13 O16 SING N N 28 3LN C13 C12 DOUB Y N 29 3LN C11 C12 SING Y N 30 3LN C30 C23 SING N N 31 3LN O16 C22 SING N N 32 3LN C22 C23 SING N N 33 3LN C23 C31 SING N N 34 3LN C23 C24 SING N N 35 3LN C14 H1 SING N N 36 3LN C6 H2 SING N N 37 3LN C11 H3 SING N N 38 3LN C12 H4 SING N N 39 3LN C3 H5 SING N N 40 3LN C25 H6 SING N N 41 3LN C27 H7 SING N N 42 3LN C29 H8 SING N N 43 3LN C2 H9 SING N N 44 3LN C22 H10 SING N N 45 3LN C22 H11 SING N N 46 3LN C30 H12 SING N N 47 3LN C30 H13 SING N N 48 3LN C30 H14 SING N N 49 3LN C31 H15 SING N N 50 3LN C31 H16 SING N N 51 3LN C31 H17 SING N N 52 3LN C24 H18 SING N N 53 3LN C24 H19 SING N N 54 3LN C24 H20 SING N N 55 3LN C17 H21 SING N N 56 3LN C17 H22 SING N N 57 3LN N21 H23 SING N N 58 3LN N21 H24 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3LN SMILES ACDLabs 12.01 "O4c2ccc(c1cncnc1)cc2C3(N=C(OC3)N)c5c4ccc(OCC(C)(C)C)c5" 3LN InChI InChI 1.03 "InChI=1S/C24H24N4O3/c1-23(2,3)12-29-17-5-7-21-19(9-17)24(13-30-22(25)28-24)18-8-15(4-6-20(18)31-21)16-10-26-14-27-11-16/h4-11,14H,12-13H2,1-3H3,(H2,25,28)/t24-/m0/s1" 3LN InChIKey InChI 1.03 CHZHWZAKWGFQNL-DEOSSOPVSA-N 3LN SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)COc1ccc2Oc3ccc(cc3[C@@]4(COC(=N4)N)c2c1)c5cncnc5" 3LN SMILES CACTVS 3.385 "CC(C)(C)COc1ccc2Oc3ccc(cc3[C]4(COC(=N4)N)c2c1)c5cncnc5" 3LN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(C)COc1ccc2c(c1)[C@]3(COC(=N3)N)c4cc(ccc4O2)c5cncnc5" 3LN SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)(C)COc1ccc2c(c1)C3(COC(=N3)N)c4cc(ccc4O2)c5cncnc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3LN "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-2'-(2,2-dimethylpropoxy)-7'-(pyrimidin-5-yl)spiro[1,3-oxazole-4,9'-xanthen]-2-amine" 3LN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(4S)-2'-(2,2-dimethylpropoxy)-7'-pyrimidin-5-yl-spiro[5H-1,3-oxazole-4,9'-xanthene]-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3LN "Create component" 2014-09-16 RCSB 3LN "Initial release" 2014-12-24 RCSB #