data_3SA # _chem_comp.id 3SA _chem_comp.name "ACARBOSE DERIVED TRISACCHARIDE" _chem_comp.type saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C19 H33 N O13" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;4-O-(4,6-DIDEOXY-4-{[4,5,6-TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-BETA-D-LYXO-HEXOPYRANOSYL)-ALPHA-D-ERY THRO-HEXOPYRANOSE ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-09-15 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status OBS _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 483.464 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3SA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1XCW _chem_comp.pdbx_subcomponent_list "GLC AC1" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_component_id 3SA C1X C1X C 0 1 N N S 1.473 15.332 39.913 5.981 1.234 -0.167 C1 GLC 1 1 polymer 1 3SA C2X C2X C 0 1 N N R 1.721 14.497 41.191 5.869 -0.051 0.656 C2 GLC 2 1 polymer 1 3SA C3X C3X C 0 1 N N R 2.836 15.143 42.033 4.631 -0.831 0.199 C3 GLC 3 1 polymer 1 3SA C4X C4X C 0 1 N N S 4.114 15.214 41.173 3.413 0.098 0.269 C4 GLC 4 1 polymer 1 3SA C5X C5X C 0 1 N N R 3.795 16.077 39.907 3.710 1.373 -0.523 C5 GLC 5 1 polymer 1 3SA C6X C6X C 0 1 N N N 5.027 16.195 38.983 2.488 2.293 -0.485 C6 GLC 6 1 polymer 1 3SA O1X O1X O 0 1 N Y N 0.949 16.610 40.219 6.076 0.904 -1.553 O1 GLC 7 1 polymer 1 3SA O2X O2X O 0 1 N N N 0.519 14.404 41.935 7.037 -0.851 0.460 O2 GLC 8 1 polymer 1 3SA O3X O3X O 0 1 N N N 3.066 14.365 43.189 4.425 -1.956 1.055 O3 GLC 9 1 polymer 1 3SA O4X O4X O 0 1 N N N 5.175 15.808 41.928 2.276 -0.561 -0.294 O4 GLC 10 1 polymer 1 3SA O5X O5X O 0 1 N N N 2.704 15.471 39.169 4.829 2.048 0.048 O5 GLC 11 1 polymer 1 3SA O6X O6X O 0 1 N N N 4.842 17.235 38.034 2.733 3.445 -1.295 O6 GLC 12 1 polymer 1 3SA C1Y C1Y C 0 1 N N R 6.342 15.008 42.008 1.696 -1.347 0.749 C1 AC1 13 2 polymer 1 3SA O2Y O2Y O 0 1 N N N 5.669 14.149 44.161 1.427 -3.228 -0.746 O2 AC1 14 2 polymer 1 3SA C2Y C2Y C 0 1 N N R 6.762 14.726 43.468 0.721 -2.357 0.141 C2 AC1 15 2 polymer 1 3SA C4Z C4Z C 0 1 N N R 12.685 17.950 43.475 -6.130 0.354 -0.354 C4 AC1 16 2 polymer 1 3SA C3Y C3Y C 0 1 N N S 7.230 16.025 44.149 -0.363 -1.600 -0.635 C3A AC1 17 2 polymer 1 3SA O3Y O3Y O 0 1 N N N 7.626 15.740 45.470 -1.361 -2.519 -1.084 O3A AC1 18 2 polymer 1 3SA C4Y C4Y C 0 1 N N S 8.423 16.599 43.341 -0.997 -0.562 0.297 C4A AC1 19 2 polymer 1 3SA N4Y N4Y N 0 1 N N N 8.927 17.881 43.945 -1.931 0.277 -0.465 N4A AC1 20 2 polymer 1 3SA C5Y C5Y C 0 1 N N R 7.922 16.868 41.896 0.108 0.314 0.893 C5A AC1 21 2 polymer 1 3SA O5Y O5Y O 0 1 N N N 7.432 15.638 41.306 1.003 -0.493 1.657 O5 AC1 22 2 polymer 1 3SA C6Y C6Y C 0 1 N N N 9.054 17.425 41.037 -0.517 1.377 1.798 C6A AC1 23 2 polymer 1 3SA C1Z C1Z C 0 1 N N S 10.026 17.823 44.976 -3.245 -0.376 -0.386 C1B AC1 24 2 polymer 1 3SA C2Z C2Z C 0 1 N N S 10.902 19.112 44.942 -4.049 -0.052 -1.647 C2B AC1 25 2 polymer 1 3SA O2Z O2Z O 0 1 N N N 10.078 20.235 45.062 -4.031 1.356 -1.889 O2B AC1 26 2 polymer 1 3SA C3Z C3Z C 0 1 N N S 11.728 19.169 43.617 -5.493 -0.521 -1.436 C3B AC1 27 2 polymer 1 3SA O3Z O3Z O 0 1 N N N 12.497 20.347 43.556 -5.505 -1.887 -1.018 O3B AC1 28 2 polymer 1 3SA O4Z O4Z O 0 1 N N N 12.974 17.699 42.120 -6.339 1.668 -0.875 O4 AC1 29 2 polymer 1 3SA C5Z C5Z C 0 1 N N N 12.142 16.648 44.147 -5.230 0.431 0.844 C5B AC1 30 2 polymer 1 3SA C6Z C6Z C 0 1 N N N 10.944 16.588 44.818 -3.974 0.118 0.829 C7B AC1 31 2 polymer 1 3SA C7Z C7Z C 0 1 N N N 12.988 15.393 44.073 -5.825 0.903 2.146 C6B AC1 32 2 polymer 1 3SA O7Z O7Z O 0 1 N N N 13.939 15.440 45.112 -4.816 0.907 3.157 O6B AC1 33 2 polymer 1 3SA H1X H1X H 0 1 N N N 0.719 14.792 39.293 6.873 1.782 0.137 H1 GLC 34 1 polymer 1 3SA H2X H2X H 0 1 N N N 2.048 13.469 40.908 5.772 0.199 1.713 H2 GLC 35 1 polymer 1 3SA H3X H3X H 0 1 N N N 2.539 16.170 42.351 4.772 -1.172 -0.827 H3 GLC 36 1 polymer 1 3SA H4X H4X H 0 1 N N N 4.438 14.192 40.866 3.209 0.354 1.308 H4 GLC 37 1 polymer 1 3SA H5X H5X H 0 1 N N N 3.510 17.099 40.249 3.934 1.111 -1.557 H5 GLC 38 1 polymer 1 3SA H6X1 1H6X H 0 0 N N N 5.270 15.224 38.491 1.618 1.759 -0.868 H61 GLC 39 1 polymer 1 3SA H6X2 2H6X H 0 0 N N N 5.969 16.328 39.564 2.300 2.605 0.542 H62 GLC 40 1 polymer 1 3SA H6 H6 H 0 1 N N N 0.797 17.123 39.434 6.145 1.739 -2.036 HO1 GLC 41 1 polymer 1 3SA H5 H5 H 0 1 N N N 0.671 13.891 42.720 7.790 -0.324 0.760 HO2 GLC 42 1 polymer 1 3SA H4 H4 H 0 1 N N N 3.754 14.764 43.709 5.213 -2.512 0.979 HO3 GLC 43 1 polymer 1 3SA H6X H6X H 0 1 N N N 5.600 17.308 37.466 1.941 3.997 -1.243 HO6 GLC 44 1 polymer 1 3SA H1Y H1Y H 0 1 N N N 6.098 14.031 41.529 2.484 -1.879 1.282 H1 AC1 45 2 polymer 1 3SA H3 H3 H 0 1 N N N 5.927 13.976 45.059 2.101 -3.677 -0.219 HO2 AC1 46 2 polymer 1 3SA H2Y H2Y H 0 1 N N N 7.617 14.010 43.484 0.259 -2.943 0.935 HC2 AC1 47 2 polymer 1 3SA H4Z H4Z H 0 1 N N N 13.617 18.231 44.018 -7.088 -0.075 -0.060 HC4 AC1 48 2 polymer 1 3SA H3Y H3Y H 0 1 N N N 6.404 16.773 44.177 0.085 -1.098 -1.493 HCA3 AC1 49 2 polymer 1 3SA H2 H2 H 0 1 N N N 7.915 16.542 45.890 -0.915 -3.159 -1.655 HOA3 AC1 50 2 polymer 1 3SA H1 H1 H 0 1 N N N 9.266 15.869 43.350 -1.533 -1.070 1.099 HCA4 AC1 51 2 polymer 1 3SA H4Y H4Y H 0 1 N N N 8.136 18.392 44.337 -2.011 1.150 0.035 HN4 AC1 52 2 polymer 1 3SA H5Y H5Y H 0 1 N N N 7.096 17.615 41.941 0.658 0.801 0.088 HCA5 AC1 53 2 polymer 1 3SA H6Y1 1H6Y H 0 0 N N N 9.950 16.762 41.049 0.271 1.931 2.307 H6A1 AC1 54 2 polymer 1 3SA H6Y2 2H6Y H 0 0 N N N 8.694 17.618 39.999 -1.112 2.063 1.195 H6A2 AC1 55 2 polymer 1 3SA H6Y3 3H6Y H 0 0 N N N 9.514 18.333 41.493 -1.157 0.894 2.537 H6A3 AC1 56 2 polymer 1 3SA H1Z H1Z H 0 1 N N N 9.507 17.742 45.959 -3.108 -1.455 -0.312 HCB1 AC1 57 2 polymer 1 3SA H2Z H2Z H 0 1 N N N 11.620 19.097 45.795 -3.614 -0.576 -2.499 HCB2 AC1 58 2 polymer 1 3SA H7 H7 H 0 1 N N N 10.612 21.021 45.041 -4.560 1.510 -2.683 HO2B AC1 59 2 polymer 1 3SA H3Z H3Z H 0 1 N N N 10.989 19.149 42.783 -6.052 -0.418 -2.367 HCB3 AC1 60 2 polymer 1 3SA H8 H8 H 0 1 N N N 12.999 20.382 42.750 -6.431 -2.130 -0.882 HOB3 AC1 61 2 polymer 1 3SA H9 H9 H 0 1 N N N 13.558 16.955 42.033 -6.750 2.186 -0.169 HO4 AC1 62 2 polymer 1 3SA H6Z H6Z H 0 1 N N N 10.727 15.583 45.216 -3.416 0.218 1.749 HC7 AC1 63 2 polymer 1 3SA H7Z1 1H7Z H 0 0 N N N 13.454 15.247 43.071 -6.218 1.912 2.021 HC61 AC1 64 2 polymer 1 3SA H7Z2 2H7Z H 0 0 N N N 12.377 14.461 44.092 -6.632 0.232 2.440 HC62 AC1 65 2 polymer 1 3SA H7Z H7Z H 0 1 N N N 14.469 14.653 45.066 -5.238 1.214 3.971 HO6B AC1 66 2 polymer 1 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3SA C1X C2X SING N N 1 3SA C1X O1X SING N N 2 3SA C1X O5X SING N N 3 3SA C1X H1X SING N N 4 3SA C2X C3X SING N N 5 3SA C2X O2X SING N N 6 3SA C2X H2X SING N N 7 3SA C3X C4X SING N N 8 3SA C3X O3X SING N N 9 3SA C3X H3X SING N N 10 3SA C4X C5X SING N N 11 3SA C4X O4X SING N N 12 3SA C4X H4X SING N N 13 3SA C5X C6X SING N N 14 3SA C5X O5X SING N N 15 3SA C5X H5X SING N N 16 3SA C6X O6X SING N N 17 3SA C6X H6X1 SING N N 18 3SA C6X H6X2 SING N N 19 3SA O1X H6 SING N N 20 3SA O2X H5 SING N N 21 3SA O3X H4 SING N N 22 3SA O4X C1Y SING N N 23 3SA O6X H6X SING N N 24 3SA C1Y C2Y SING N N 25 3SA C1Y O5Y SING N N 26 3SA C1Y H1Y SING N N 27 3SA C2Y C3Y SING N N 28 3SA C2Y O2Y SING N N 29 3SA C2Y H2Y SING N N 30 3SA C3Y C4Y SING N N 31 3SA C3Y O3Y SING N N 32 3SA C3Y H3Y SING N N 33 3SA C4Y C5Y SING N N 34 3SA C4Y N4Y SING N N 35 3SA C4Y H1 SING N N 36 3SA C5Y C6Y SING N N 37 3SA C5Y O5Y SING N N 38 3SA C5Y H5Y SING N N 39 3SA C6Y H6Y1 SING N N 40 3SA C6Y H6Y2 SING N N 41 3SA C6Y H6Y3 SING N N 42 3SA O2Y H3 SING N N 43 3SA O3Y H2 SING N N 44 3SA N4Y C1Z SING N N 45 3SA N4Y H4Y SING N N 46 3SA C1Z C2Z SING N N 47 3SA C1Z C6Z SING N N 48 3SA C1Z H1Z SING N N 49 3SA C2Z O2Z SING N N 50 3SA C2Z C3Z SING N N 51 3SA C2Z H2Z SING N N 52 3SA O2Z H7 SING N N 53 3SA C3Z O3Z SING N N 54 3SA C3Z C4Z SING N N 55 3SA C3Z H3Z SING N N 56 3SA O3Z H8 SING N N 57 3SA C4Z O4Z SING N N 58 3SA C4Z C5Z SING N N 59 3SA C4Z H4Z SING N N 60 3SA O4Z H9 SING N N 61 3SA C5Z C6Z DOUB N N 62 3SA C5Z C7Z SING N N 63 3SA C6Z H6Z SING N N 64 3SA C7Z O7Z SING N N 65 3SA C7Z H7Z1 SING N N 66 3SA C7Z H7Z2 SING N N 67 3SA O7Z H7Z SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3SA SMILES ACDLabs 10.04 "OC3C(OC2OC(C)C(NC1C=C(CO)C(O)C(O)C1O)C(O)C2O)C(OC(O)C3O)CO" 3SA SMILES_CANONICAL CACTVS 3.341 "C[C@H]1O[C@H](O[C@H]2[C@H](O)[C@@H](O)[C@@H](O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1N[C@H]3C=C(CO)[C@@H](O)[C@H](O)[C@H]3O" 3SA SMILES CACTVS 3.341 "C[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O)O[CH]2CO)[CH](O)[CH](O)[CH]1N[CH]3C=C(CO)[CH](O)[CH](O)[CH]3O" 3SA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)O)O)CO)O)O)N[C@H]3C=C([C@H]([C@@H]([C@H]3O)O)O)CO" 3SA SMILES "OpenEye OEToolkits" 1.5.0 "CC1C(C(C(C(O1)OC2C(OC(C(C2O)O)O)CO)O)O)NC3C=C(C(C(C3O)O)O)CO" 3SA InChI InChI 1.03 "InChI=1S/C19H33NO13/c1-5-9(20-7-2-6(3-21)10(23)13(26)11(7)24)12(25)16(29)19(31-5)33-17-8(4-22)32-18(30)15(28)14(17)27/h2,5,7-30H,3-4H2,1H3/t5-,7+,8-,9-,10-,11+,12+,13+,14-,15-,16-,17-,18+,19-/m1/s1" 3SA InChIKey InChI 1.03 SNMISNLUIRCRQE-SFSRYZOZSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3SA "SYSTEMATIC NAME" ACDLabs 10.04 "4-O-(4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranosyl)-alpha-D-glucopyranose" 3SA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3R,4R,5S,6R)-5-[(2R,3R,4S,5S,6R)-3,4-dihydroxy-6-methyl-5-[[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)-1-cyclohex-2-enyl]amino]oxan-2-yl]oxy-6-(hydroxymethyl)oxane-2,3,4-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3SA "Create component" 2004-09-15 RCSB 3SA "Modify descriptor" 2011-06-04 RCSB 3SA "Other modification" 2020-07-03 RCSB 3SA "Obsolete component" 2020-07-17 RCSB ##