data_3SD
#
_chem_comp.id 3SD
_chem_comp.name "N~4~-(2,2-dimethylpropyl)-N~1~-{(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[(5-methyl-1,2-oxazol-3-yl)carbonyl]-L-aspartamide"
_chem_comp.type PEPTIDE-LIKE
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C32 H41 N5 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-06-15
_chem_comp.pdbx_modified_date 2012-06-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 575.698
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 3SD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3SDI
_chem_comp.pdbx_subcomponent_list "02J 02L HPE 02N"
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3SD C4 C4 C 0 1 Y N N 12.336 -137.034 23.598 4.759 3.878 0.608 C4 02J 1
3SD C5 C5 C 0 1 Y N N 12.609 -136.245 24.644 5.691 4.117 1.560 C5 02J 2
3SD C6 C6 C 0 1 N N N 13.245 -136.712 25.953 6.517 5.368 1.717 C6 02J 3
3SD O1 O1 O 0 1 Y N N 12.224 -134.952 24.375 5.736 3.026 2.336 O1 02J 4
3SD N2 N2 N 0 1 Y N N 11.681 -134.987 23.052 4.956 2.179 1.967 N2 02J 5
3SD C3 C3 C 0 1 Y N N 11.777 -136.257 22.655 4.283 2.573 0.915 C3 02J 6
3SD C41 C41 C 0 1 N N N 11.334 -136.786 21.292 3.243 1.809 0.184 C41 02J 7
3SD O42 O42 O 0 1 N N N 11.775 -137.860 20.898 2.702 2.296 -0.788 O42 02J 8
3SD C8 C8 C 0 1 N N S 10.020 -136.407 19.265 1.948 -0.222 -0.182 C8 02L 9
3SD C10 C10 C 0 1 N N N 11.053 -136.240 18.166 0.544 0.082 0.273 C10 02L 10
3SD N7 N7 N 0 1 N N N 10.519 -136.010 20.587 2.897 0.574 0.600 N7 02L 11
3SD C9 C9 C 0 1 N N N 8.884 -135.504 18.830 2.240 -1.710 0.025 C9 02L 12
3SD C33 C33 C 0 1 N N N 7.601 -135.702 19.601 3.591 -2.042 -0.554 C33 02L 13
3SD O35 O35 O 0 1 N N N 7.381 -136.753 20.213 4.211 -1.199 -1.168 O35 02L 14
3SD N34 N34 N 0 1 N N N 6.786 -134.644 19.507 4.111 -3.274 -0.389 N34 02L 15
3SD C36 C36 C 0 1 N N N 5.457 -134.543 20.141 5.424 -3.597 -0.952 C36 02L 16
3SD C37 C37 C 0 1 N N N 4.361 -134.324 19.076 5.777 -5.049 -0.624 C37 02L 17
3SD C40 C40 C 0 1 N N N 4.289 -135.530 18.142 5.812 -5.236 0.894 C40 02L 18
3SD C38 C38 C 0 1 N N N 3.006 -134.133 19.753 4.722 -5.978 -1.228 C38 02L 19
3SD C39 C39 C 0 1 N N N 4.654 -133.080 18.244 7.149 -5.386 -1.212 C39 02L 20
3SD O11 O11 O 0 1 N N N 11.724 -135.219 18.044 0.354 0.885 1.162 O11 02L 21
3SD N13 N13 N 0 1 N N N 11.066 -137.237 17.298 -0.502 -0.539 -0.309 N HPE 22
3SD C12 C12 C 0 1 N N S 11.910 -137.224 16.108 -1.867 -0.244 0.133 CA HPE 23
3SD C15 C15 C 0 1 N N N 10.979 -136.941 14.931 -2.760 -1.418 -0.175 C HPE 24
3SD O19 O19 O 0 1 N N N 9.829 -137.372 14.901 -2.301 -2.405 -0.711 O HPE 25
3SD C14 C14 C 0 1 N N N 12.573 -138.582 15.933 -2.384 0.996 -0.601 CB HPE 26
3SD C17 C17 C 0 1 N N N 13.389 -138.912 17.165 -1.553 2.214 -0.191 CG HPE 27
3SD C18 C18 C 0 1 Y N N 14.574 -137.960 17.312 -2.062 3.435 -0.913 CD HPE 28
3SD C28 C28 C 0 1 Y N N 15.505 -137.829 16.272 -3.055 4.210 -0.345 CE1 HPE 29
3SD C32 C32 C 0 1 Y N N 14.731 -137.234 18.493 -1.534 3.779 -2.144 CE2 HPE 30
3SD C29 C29 C 0 1 Y N N 16.603 -136.972 16.402 -3.521 5.330 -1.008 CZ1 HPE 31
3SD C31 C31 C 0 1 Y N N 15.827 -136.373 18.621 -2.001 4.899 -2.806 CZ2 HPE 32
3SD C30 C30 C 0 1 Y N N 16.759 -136.248 17.580 -2.994 5.674 -2.239 CH HPE 33
3SD C20 C20 C 0 1 N N N 10.678 -135.864 12.806 -4.937 -2.513 -0.155 C20 02N 34
3SD C21 C21 C 0 1 Y N N 9.955 -134.540 12.993 -6.341 -2.209 0.299 C21 02N 35
3SD C22 C22 C 0 1 Y N N 10.465 -133.402 12.392 -6.738 -2.534 1.583 C22 02N 36
3SD C24 C24 C 0 1 Y N N 8.643 -132.118 13.290 -8.917 -1.651 1.133 C24 02N 37
3SD C26 C26 C 0 1 Y N N 8.786 -134.476 13.733 -7.231 -1.601 -0.567 C26 02N 38
3SD N16 N16 N 0 1 N N N 11.481 -136.184 13.976 -4.069 -1.372 0.144 N16 02N 39
3SD C23 C23 C 0 1 Y N N 9.808 -132.187 12.548 -8.026 -2.255 2.000 C23 02N 40
3SD C27 C27 C 0 1 N N N 7.923 -130.777 13.441 -10.322 -1.347 1.587 C27 02N 41
3SD C25 C25 C 0 1 Y N N 8.132 -133.262 13.880 -8.519 -1.322 -0.150 C25 02N 42
3SD H4 H4 H 0 1 N N N 12.529 -138.094 23.526 4.446 4.529 -0.196 H4 02J 43
3SD H6 H6 H 0 1 N N N 13.344 -135.857 26.638 5.991 6.072 2.362 H6 02J 44
3SD H6A H6A H 0 1 N N N 12.609 -137.481 26.416 7.479 5.115 2.162 H6A 02J 45
3SD H6B H6B H 0 1 N N N 14.240 -137.134 25.747 6.677 5.822 0.739 H6B 02J 46
3SD H8 H8 H 0 1 N N N 9.728 -137.461 19.384 2.049 0.025 -1.238 H8 02L 47
3SD HN7 HN7 H 0 1 N N N 10.237 -135.129 20.968 3.277 0.213 1.416 HN7 02L 48
3SD H9 H9 H 0 1 N N N 9.207 -134.462 18.974 2.236 -1.937 1.091 H9 02L 49
3SD H9A H9A H 0 1 N N N 8.676 -135.710 17.770 1.475 -2.303 -0.476 H9A 02L 50
3SD HN34 HN34 H 0 0 N N N 7.101 -133.864 18.967 3.615 -3.948 0.101 HN34 02L 51
3SD H36 H36 H 0 1 N N N 5.247 -135.475 20.687 5.399 -3.464 -2.033 H36 02L 52
3SD H36A H36A H 0 0 N N N 5.455 -133.693 20.839 6.176 -2.935 -0.522 H36A 02L 53
3SD H40 H40 H 0 1 N N N 3.506 -135.364 17.388 4.835 -4.996 1.312 H40 02L 54
3SD H40A H40A H 0 0 N N N 5.259 -135.663 17.640 6.064 -6.270 1.127 H40A 02L 55
3SD H40B H40B H 0 0 N N N 4.051 -136.432 18.725 6.564 -4.574 1.324 H40B 02L 56
3SD H38 H38 H 0 1 N N N 2.232 -133.978 18.987 4.697 -5.846 -2.309 H38 02L 57
3SD H38A H38A H 0 0 N N N 2.762 -135.028 20.344 4.973 -7.013 -0.995 H38A 02L 58
3SD H38B H38B H 0 0 N N N 3.048 -133.256 20.415 3.744 -5.739 -0.809 H38B 02L 59
3SD H39 H39 H 0 1 N N N 3.861 -132.945 17.494 7.901 -4.724 -0.782 H39 02L 60
3SD H39A H39A H 0 0 N N N 4.690 -132.199 18.902 7.400 -6.420 -0.979 H39A 02L 61
3SD H39B H39B H 0 0 N N N 5.623 -133.198 17.736 7.124 -5.253 -2.293 H39B 02L 62
3SD HN13 HN13 H 0 0 N N N 10.477 -138.028 17.463 -0.351 -1.181 -1.020 H HPE 63
3SD H12 H12 H 0 1 N N N 12.705 -136.467 16.182 -1.870 -0.058 1.207 HA HPE 64
3SD H14 H14 H 0 1 N N N 13.233 -138.556 15.053 -3.428 1.164 -0.339 HB2 HPE 65
3SD H14A H14A H 0 0 N N N 11.800 -139.351 15.790 -2.298 0.843 -1.676 HB3 HPE 66
3SD H17 H17 H 0 1 N N N 12.746 -138.821 18.053 -1.638 2.366 0.885 HG2 HPE 67
3SD H17A H17A H 0 0 N N N 13.767 -139.941 17.077 -0.508 2.046 -0.452 HG3 HPE 68
3SD H28 H28 H 0 1 N N N 15.373 -138.395 15.362 -3.470 3.939 0.614 HE1 HPE 69
3SD H32 H32 H 0 1 N N N 14.017 -137.335 19.297 -0.758 3.173 -2.588 HE2 HPE 70
3SD H29 H29 H 0 1 N N N 17.319 -136.874 15.600 -4.298 5.936 -0.564 HZ1 HPE 71
3SD H31 H31 H 0 1 N N N 15.956 -135.801 19.528 -1.589 5.168 -3.768 HZ2 HPE 72
3SD H30 H30 H 0 1 N N N 17.604 -135.585 17.694 -3.359 6.549 -2.757 HH HPE 73
3SD H20 H20 H 0 1 N N N 9.935 -136.660 12.653 -4.569 -3.396 0.367 H20 02N 74
3SD H20A H20A H 0 0 N N N 11.336 -135.792 11.928 -4.934 -2.699 -1.229 H20A 02N 75
3SD H22 H22 H 0 1 N N N 11.369 -133.458 11.804 -6.041 -3.005 2.260 H22 02N 76
3SD H26 H26 H 0 1 N N N 8.386 -135.367 14.193 -6.920 -1.344 -1.568 H26 02N 77
3SD HN16 HN16 H 0 0 N N N 12.413 -135.830 14.056 -4.436 -0.583 0.573 HN16 02N 78
3SD H23 H23 H 0 1 N N N 10.208 -131.295 12.089 -8.336 -2.509 3.003 H23 02N 79
3SD H27 H27 H 0 1 N N N 7.199 -130.655 12.622 -10.967 -2.197 1.364 H27 02N 80
3SD H27A H27A H 0 0 N N N 7.394 -130.752 14.405 -10.324 -1.161 2.661 H27A 02N 81
3SD H27B H27B H 0 0 N N N 8.659 -129.960 13.404 -10.690 -0.465 1.064 H27B 02N 82
3SD H25 H25 H 0 1 N N N 7.221 -133.208 14.457 -9.216 -0.851 -0.827 H25 02N 83
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3SD C3 C4 SING Y N 1
3SD C4 C5 DOUB Y N 2
3SD C4 H4 SING N N 3
3SD O1 C5 SING Y N 4
3SD C5 C6 SING N N 5
3SD C6 H6 SING N N 6
3SD C6 H6A SING N N 7
3SD C6 H6B SING N N 8
3SD C10 C8 SING N N 9
3SD C9 C8 SING N N 10
3SD C8 N7 SING N N 11
3SD C8 H8 SING N N 12
3SD N13 C10 SING N N 13
3SD O11 C10 DOUB N N 14
3SD N16 C15 SING N N 15
3SD O19 C15 DOUB N N 16
3SD C15 C12 SING N N 17
3SD C14 C17 SING N N 18
3SD C17 C18 SING N N 19
3SD C17 H17 SING N N 20
3SD C17 H17A SING N N 21
3SD C20 C21 SING N N 22
3SD C20 N16 SING N N 23
3SD C20 H20 SING N N 24
3SD C20 H20A SING N N 25
3SD C22 C21 DOUB Y N 26
3SD C21 C26 SING Y N 27
3SD C22 C23 SING Y N 28
3SD C22 H22 SING N N 29
3SD C23 C24 DOUB Y N 30
3SD C24 C27 SING N N 31
3SD C24 C25 SING Y N 32
3SD C26 C25 DOUB Y N 33
3SD C26 H26 SING N N 34
3SD C28 C29 DOUB Y N 35
3SD C28 C18 SING Y N 36
3SD C28 H28 SING N N 37
3SD N2 O1 SING Y N 38
3SD C3 N2 DOUB Y N 39
3SD C41 C3 SING N N 40
3SD N7 C41 SING N N 41
3SD O42 C41 DOUB N N 42
3SD N7 HN7 SING N N 43
3SD C9 C33 SING N N 44
3SD C9 H9 SING N N 45
3SD C9 H9A SING N N 46
3SD N34 C33 SING N N 47
3SD C33 O35 DOUB N N 48
3SD N34 C36 SING N N 49
3SD N34 HN34 SING N N 50
3SD C37 C36 SING N N 51
3SD C36 H36 SING N N 52
3SD C36 H36A SING N N 53
3SD C40 C37 SING N N 54
3SD C39 C37 SING N N 55
3SD C37 C38 SING N N 56
3SD C40 H40 SING N N 57
3SD C40 H40A SING N N 58
3SD C40 H40B SING N N 59
3SD C38 H38 SING N N 60
3SD C38 H38A SING N N 61
3SD C38 H38B SING N N 62
3SD C39 H39 SING N N 63
3SD C39 H39A SING N N 64
3SD C39 H39B SING N N 65
3SD C12 N13 SING N N 66
3SD N13 HN13 SING N N 67
3SD C14 C12 SING N N 68
3SD C12 H12 SING N N 69
3SD C14 H14 SING N N 70
3SD C14 H14A SING N N 71
3SD C18 C32 DOUB Y N 72
3SD C29 C30 SING Y N 73
3SD C29 H29 SING N N 74
3SD C30 C31 DOUB Y N 75
3SD C30 H30 SING N N 76
3SD C32 C31 SING Y N 77
3SD C31 H31 SING N N 78
3SD C32 H32 SING N N 79
3SD N16 HN16 SING N N 80
3SD C23 H23 SING N N 81
3SD C27 H27 SING N N 82
3SD C27 H27A SING N N 83
3SD C27 H27B SING N N 84
3SD C25 H25 SING N N 85
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3SD SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NCc1ccc(cc1)C)CCc2ccccc2)CC(=O)NCC(C)(C)C)c3noc(c3)C"
3SD InChI InChI 1.03
"InChI=1S/C32H41N5O5/c1-21-11-13-24(14-12-21)19-33-29(39)25(16-15-23-9-7-6-8-10-23)35-30(40)26(18-28(38)34-20-32(3,4)5)36-31(41)27-17-22(2)42-37-27/h6-14,17,25-26H,15-16,18-20H2,1-5H3,(H,33,39)(H,34,38)(H,35,40)(H,36,41)/t25-,26-/m0/s1"
3SD InChIKey InChI 1.03 KVWOEKNSWWTEAJ-UIOOFZCWSA-N
3SD SMILES_CANONICAL CACTVS 3.370 "Cc1onc(c1)C(=O)N[C@@H](CC(=O)NCC(C)(C)C)C(=O)N[C@@H](CCc2ccccc2)C(=O)NCc3ccc(C)cc3"
3SD SMILES CACTVS 3.370 "Cc1onc(c1)C(=O)N[CH](CC(=O)NCC(C)(C)C)C(=O)N[CH](CCc2ccccc2)C(=O)NCc3ccc(C)cc3"
3SD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "Cc1ccc(cc1)CNC(=O)[C@H](CCc2ccccc2)NC(=O)[C@H](CC(=O)NCC(C)(C)C)NC(=O)c3cc(on3)C"
3SD SMILES "OpenEye OEToolkits" 1.7.2 "Cc1ccc(cc1)CNC(=O)C(CCc2ccccc2)NC(=O)C(CC(=O)NCC(C)(C)C)NC(=O)c3cc(on3)C"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3SD "SYSTEMATIC NAME" ACDLabs 12.01 "N~4~-(2,2-dimethylpropyl)-N~1~-{(2S)-1-[(4-methylbenzyl)amino]-1-oxo-4-phenylbutan-2-yl}-N~2~-[(5-methyl-1,2-oxazol-3-yl)carbonyl]-L-aspartamide"
3SD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-N'-(2,2-dimethylpropyl)-2-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]-N-[(2S)-1-[(4-methylphenyl)methylamino]-1-oxidanylidene-4-phenyl-butan-2-yl]butanediamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3SD "Create component" 2011-06-15 RCSB
#