data_3V9 # _chem_comp.id 3V9 _chem_comp.name "N-(1,3-benzodioxol-5-ylmethyl)-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 N2 O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-11-12 _chem_comp.pdbx_modified_date 2016-08-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 432.362 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3V9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4WWG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3V9 O1 O1 O 0 1 N N N 18.606 16.846 5.581 -6.114 -3.477 -0.798 O1 3V9 1 3V9 O2 O2 O 0 1 N N N 16.944 17.078 3.752 -6.679 -1.895 1.087 O2 3V9 2 3V9 O3 O3 O 0 1 N N N 18.058 14.822 4.167 -4.332 -2.824 1.022 O3 3V9 3 3V9 P P1 P 0 1 N N N 17.674 16.174 4.649 -5.592 -2.299 0.167 P 3V9 4 3V9 O01 O4 O 0 1 N N N 16.481 15.772 5.723 -5.145 -1.034 -0.724 O01 3V9 5 3V9 C02 C1 C 0 1 N N N 16.709 15.071 6.960 -4.733 0.211 -0.157 C02 3V9 6 3V9 C03 C2 C 0 1 N N N 15.854 13.760 7.042 -4.379 1.190 -1.278 C03 3V9 7 3V9 C04 C3 C 0 1 N N N 14.345 14.101 7.114 -3.241 0.611 -2.121 C04 3V9 8 3V9 C25 C4 C 0 1 N N N 16.238 12.993 8.306 -5.606 1.415 -2.164 C25 3V9 9 3V9 C05 C5 C 0 1 N N R 16.142 12.858 5.795 -3.937 2.523 -0.670 C05 3V9 10 3V9 O24 O5 O 0 1 N N N 17.560 12.666 5.611 -5.041 3.128 0.005 O24 3V9 11 3V9 C06 C6 C 0 1 N N N 15.478 11.470 5.925 -2.819 2.282 0.310 C06 3V9 12 3V9 O23 O6 O 0 1 N N N 14.265 11.347 5.886 -3.004 2.458 1.496 O23 3V9 13 3V9 N07 N1 N 0 1 N N N 16.305 10.446 6.058 -1.613 1.870 -0.130 N07 3V9 14 3V9 C08 C7 C 0 1 N N N 15.847 9.051 6.173 -0.556 1.543 0.830 C08 3V9 15 3V9 C09 C8 C 0 1 N N N 15.346 8.709 7.592 0.701 1.107 0.074 C09 3V9 16 3V9 C10 C9 C 0 1 N N N 14.670 7.350 7.556 1.789 0.770 1.061 C10 3V9 17 3V9 O22 O7 O 0 1 N N N 13.476 7.279 7.269 1.580 0.869 2.251 O22 3V9 18 3V9 N11 N2 N 0 1 N N N 15.435 6.292 7.841 2.995 0.358 0.620 N11 3V9 19 3V9 C12 C10 C 0 1 N N N 14.911 4.941 7.733 4.052 0.031 1.580 C12 3V9 20 3V9 C13 C11 C 0 1 Y N N 15.470 4.005 8.665 5.290 -0.399 0.836 C13 3V9 21 3V9 C21 C12 C 0 1 Y N N 16.005 4.341 9.923 6.234 0.541 0.467 C21 3V9 22 3V9 C17 C13 C 0 1 Y N N 16.477 3.366 10.752 7.373 0.148 -0.217 C17 3V9 23 3V9 O18 O8 O 0 1 N N N 17.043 3.495 11.995 8.438 0.862 -0.687 O18 3V9 24 3V9 C19 C14 C 0 1 N N N 17.449 2.175 12.364 9.082 0.003 -1.647 C19 3V9 25 3V9 O20 O9 O 0 1 N N N 16.921 1.260 11.363 8.748 -1.323 -1.198 O20 3V9 26 3V9 C16 C15 C 0 1 Y N N 16.416 2.069 10.397 7.564 -1.195 -0.531 C16 3V9 27 3V9 C15 C16 C 0 1 Y N N 15.901 1.698 9.207 6.614 -2.132 -0.159 C15 3V9 28 3V9 C14 C17 C 0 1 Y N N 15.407 2.658 8.335 5.482 -1.733 0.528 C14 3V9 29 3V9 H1 H1 H 0 1 N N N 18.575 17.785 5.438 -6.400 -4.272 -0.327 H1 3V9 30 3V9 H2 H2 H 0 1 N N N 17.759 14.708 3.273 -3.581 -3.106 0.483 H2 3V9 31 3V9 H3 H3 H 0 1 N N N 17.775 14.808 7.031 -5.543 0.623 0.444 H3 3V9 32 3V9 H4 H4 H 0 1 N N N 16.437 15.728 7.799 -3.859 0.050 0.475 H4 3V9 33 3V9 H5 H5 H 0 1 N N N 14.153 14.734 7.993 -3.592 -0.278 -2.644 H5 3V9 34 3V9 H6 H6 H 0 1 N N N 14.047 14.639 6.202 -2.912 1.354 -2.847 H6 3V9 35 3V9 H7 H7 H 0 1 N N N 13.763 13.172 7.198 -2.407 0.345 -1.471 H7 3V9 36 3V9 H8 H8 H 0 1 N N N 16.040 13.618 9.189 -6.397 1.883 -1.577 H8 3V9 37 3V9 H9 H9 H 0 1 N N N 15.643 12.070 8.369 -5.338 2.065 -2.997 H9 3V9 38 3V9 H10 H10 H 0 1 N N N 17.308 12.739 8.270 -5.957 0.458 -2.548 H10 3V9 39 3V9 H11 H11 H 0 1 N N N 15.721 13.359 4.911 -3.589 3.185 -1.463 H11 3V9 40 3V9 H12 H12 H 0 1 N N N 17.986 13.511 5.529 -5.403 2.592 0.725 H12 3V9 41 3V9 H13 H13 H 0 1 N N N 17.288 10.628 6.082 -1.446 1.791 -1.082 H13 3V9 42 3V9 H14 H14 H 0 1 N N N 15.025 8.890 5.460 -0.329 2.421 1.435 H14 3V9 43 3V9 H15 H15 H 0 1 N N N 16.685 8.383 5.924 -0.890 0.732 1.477 H15 3V9 44 3V9 H16 H16 H 0 1 N N N 16.197 8.680 8.288 0.475 0.229 -0.531 H16 3V9 45 3V9 H17 H17 H 0 1 N N N 14.626 9.472 7.924 1.036 1.917 -0.573 H17 3V9 46 3V9 H18 H18 H 0 1 N N N 16.381 6.432 8.133 3.162 0.279 -0.332 H18 3V9 47 3V9 H19 H19 H 0 1 N N N 13.824 4.981 7.898 4.278 0.909 2.185 H19 3V9 48 3V9 H20 H20 H 0 1 N N N 15.115 4.575 6.716 3.717 -0.780 2.227 H20 3V9 49 3V9 H21 H21 H 0 1 N N N 16.042 5.375 10.233 6.084 1.582 0.711 H21 3V9 50 3V9 H22 H22 H 0 1 N N N 17.045 1.921 13.355 8.685 0.181 -2.646 H22 3V9 51 3V9 H23 H23 H 0 1 N N N 18.547 2.113 12.388 10.162 0.155 -1.632 H23 3V9 52 3V9 H24 H24 H 0 1 N N N 15.873 0.654 8.933 6.759 -3.174 -0.401 H24 3V9 53 3V9 H25 H25 H 0 1 N N N 14.971 2.355 7.394 4.744 -2.465 0.822 H25 3V9 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3V9 O2 P DOUB N N 1 3V9 O3 P SING N N 2 3V9 P O1 SING N N 3 3V9 P O01 SING N N 4 3V9 O24 C05 SING N N 5 3V9 O01 C02 SING N N 6 3V9 C05 C06 SING N N 7 3V9 C05 C03 SING N N 8 3V9 O23 C06 DOUB N N 9 3V9 C06 N07 SING N N 10 3V9 N07 C08 SING N N 11 3V9 C08 C09 SING N N 12 3V9 C02 C03 SING N N 13 3V9 C03 C04 SING N N 14 3V9 C03 C25 SING N N 15 3V9 O22 C10 DOUB N N 16 3V9 C10 C09 SING N N 17 3V9 C10 N11 SING N N 18 3V9 C12 N11 SING N N 19 3V9 C12 C13 SING N N 20 3V9 C14 C13 SING Y N 21 3V9 C14 C15 DOUB Y N 22 3V9 C13 C21 DOUB Y N 23 3V9 C15 C16 SING Y N 24 3V9 C21 C17 SING Y N 25 3V9 C16 C17 DOUB Y N 26 3V9 C16 O20 SING N N 27 3V9 C17 O18 SING N N 28 3V9 O20 C19 SING N N 29 3V9 O18 C19 SING N N 30 3V9 O1 H1 SING N N 31 3V9 O3 H2 SING N N 32 3V9 C02 H3 SING N N 33 3V9 C02 H4 SING N N 34 3V9 C04 H5 SING N N 35 3V9 C04 H6 SING N N 36 3V9 C04 H7 SING N N 37 3V9 C25 H8 SING N N 38 3V9 C25 H9 SING N N 39 3V9 C25 H10 SING N N 40 3V9 C05 H11 SING N N 41 3V9 O24 H12 SING N N 42 3V9 N07 H13 SING N N 43 3V9 C08 H14 SING N N 44 3V9 C08 H15 SING N N 45 3V9 C09 H16 SING N N 46 3V9 C09 H17 SING N N 47 3V9 N11 H18 SING N N 48 3V9 C12 H19 SING N N 49 3V9 C12 H20 SING N N 50 3V9 C21 H21 SING N N 51 3V9 C19 H22 SING N N 52 3V9 C19 H23 SING N N 53 3V9 C15 H24 SING N N 54 3V9 C14 H25 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3V9 SMILES ACDLabs 12.01 "O=P(O)(O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCc1ccc2OCOc2c1" 3V9 InChI InChI 1.03 "InChI=1S/C17H25N2O9P/c1-17(2,9-28-29(23,24)25)15(21)16(22)18-6-5-14(20)19-8-11-3-4-12-13(7-11)27-10-26-12/h3-4,7,15,21H,5-6,8-10H2,1-2H3,(H,18,22)(H,19,20)(H2,23,24,25)/t15-/m0/s1" 3V9 InChIKey InChI 1.03 BHYGBZMPSWVNBD-HNNXBMFYSA-N 3V9 SMILES_CANONICAL CACTVS 3.385 "CC(C)(CO[P](O)(O)=O)[C@@H](O)C(=O)NCCC(=O)NCc1ccc2OCOc2c1" 3V9 SMILES CACTVS 3.385 "CC(C)(CO[P](O)(O)=O)[CH](O)C(=O)NCCC(=O)NCc1ccc2OCOc2c1" 3V9 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(C)(COP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCc1ccc2c(c1)OCO2)O" 3V9 SMILES "OpenEye OEToolkits" 1.9.2 "CC(C)(COP(=O)(O)O)C(C(=O)NCCC(=O)NCc1ccc2c(c1)OCO2)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3V9 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(1,3-benzodioxol-5-ylmethyl)-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide" 3V9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(3R)-4-[[3-(1,3-benzodioxol-5-ylmethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3V9 "Create component" 2014-11-12 RCSB 3V9 "Initial release" 2016-08-10 RCSB #