data_3XB # _chem_comp.id 3XB _chem_comp.name "6-{[(3R,4R)-4-(2-{[2,2-difluoro-2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H27 F3 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-06-25 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 408.460 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3XB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NLU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3XB C1 C1 C 0 1 N N N -2.075 4.017 64.465 -0.212 -2.779 -1.402 C1 3XB 1 3XB O1 O1 O 0 1 N N N -1.126 3.328 63.664 -1.091 -1.958 -0.629 O1 3XB 2 3XB C2 C2 C 0 1 N N N -1.637 5.457 64.419 1.046 -1.984 -1.758 C2 3XB 3 3XB N2 N2 N 0 1 N N N -0.189 5.545 64.468 1.789 -1.667 -0.531 N2 3XB 4 3XB C3 C3 C 0 1 N N N 0.439 6.758 64.989 3.006 -0.902 -0.835 C3 3XB 5 3XB C4 C4 C 0 1 N N N -0.548 7.444 65.924 3.751 -0.592 0.465 C4 3XB 6 3XB F5 F5 F 0 1 N N N -0.896 6.542 66.823 2.925 0.161 1.308 F5 3XB 7 3XB F6 F6 F 0 1 N N N -1.661 7.714 65.260 4.098 -1.789 1.101 F6 3XB 8 3XB "N1'" "N1'" N 0 1 N N N -0.592 3.547 60.472 -3.440 -3.089 1.813 "N1'" 3XB 9 3XB C11 C11 C 0 1 Y N N -0.036 8.658 66.660 4.999 0.192 0.154 C11 3XB 10 3XB C12 C12 C 0 1 Y N N 0.550 8.498 67.896 4.957 1.574 0.119 C12 3XB 11 3XB C13 C13 C 0 1 Y N N 0.981 9.590 68.595 6.104 2.294 -0.167 C13 3XB 12 3XB F13 F13 F 0 1 N N N 1.534 9.396 69.785 6.063 3.644 -0.201 F13 3XB 13 3XB C14 C14 C 0 1 Y N N 0.832 10.864 68.095 7.293 1.630 -0.419 C14 3XB 14 3XB C15 C15 C 0 1 Y N N 0.230 11.049 66.871 7.332 0.249 -0.384 C15 3XB 15 3XB C16 C16 C 0 1 Y N N -0.208 9.943 66.172 6.188 -0.469 -0.092 C16 3XB 16 3XB N1A N1A N 0 1 Y N N 2.416 0.347 62.805 -5.118 0.635 -0.985 N1A 3XB 17 3XB "C2'" "C2'" C 0 1 N N N -1.773 3.772 61.291 -2.132 -3.286 1.135 "C2'" 3XB 18 3XB C2A C2A C 0 1 Y N N 1.076 0.194 62.738 -4.044 0.821 -0.240 C2A 3XB 19 3XB "C3'" "C3'" C 0 1 N N R -1.650 2.768 62.450 -2.303 -2.609 -0.242 "C3'" 3XB 20 3XB C3A C3A C 0 1 Y N N 0.499 -0.953 62.206 -3.952 1.904 0.611 C3A 3XB 21 3XB "C4'" "C4'" C 0 1 N N R -0.602 1.763 62.018 -3.428 -1.572 -0.043 "C4'" 3XB 22 3XB C4A C4A C 0 1 Y N N 1.327 -1.974 61.741 -5.006 2.806 0.681 C4A 3XB 23 3XB "C5'" "C5'" C 0 1 N N N 0.219 2.421 60.905 -3.842 -1.709 1.438 "C5'" 3XB 24 3XB C5A C5A C 0 1 Y N N 2.723 -1.809 61.826 -6.118 2.585 -0.111 C5A 3XB 25 3XB C6A C6A C 0 1 Y N N 3.251 -0.622 62.371 -6.143 1.473 -0.947 C6A 3XB 26 3XB N6A N6A N 0 1 N N N 4.582 -0.403 62.482 -7.254 1.239 -1.748 N6A 3XB 27 3XB C7A C7A C 0 1 N N N 0.223 1.313 63.220 -2.905 -0.161 -0.320 C7A 3XB 28 3XB C8A C8A C 0 1 N N N 0.697 -3.229 61.171 -4.939 3.999 1.599 C8A 3XB 29 3XB H1 H1 H 0 1 N N N -3.092 3.899 64.064 0.066 -3.659 -0.823 H1 3XB 30 3XB H1A H1A H 0 1 N N N -2.075 3.635 65.497 -0.716 -3.090 -2.317 H1A 3XB 31 3XB H2 H2 H 0 1 N N N -1.996 5.914 63.485 1.676 -2.578 -2.421 H2 3XB 32 3XB H2A H2A H 0 1 N N N -2.061 5.992 65.282 0.761 -1.059 -2.260 H2A 3XB 33 3XB HN2 HN2 H 0 1 N N N 0.118 4.796 65.055 1.206 -1.172 0.127 HN2 3XB 34 3XB H3 H3 H 0 1 N N N 1.356 6.498 65.539 3.649 -1.489 -1.491 H3 3XB 35 3XB H3A H3A H 0 1 N N N 0.697 7.432 64.158 2.735 0.030 -1.330 H3A 3XB 36 3XB "HN1'" "HN1'" H 0 0 N N N -0.026 4.370 60.513 -3.345 -3.179 2.813 "HN1'" 3XB 37 3XB H12 H12 H 0 1 N N N 0.669 7.509 68.313 4.029 2.091 0.315 H12 3XB 38 3XB H14 H14 H 0 1 N N N 1.186 11.714 68.660 8.188 2.191 -0.643 H14 3XB 39 3XB H15 H15 H 0 1 N N N 0.103 12.042 66.465 8.259 -0.269 -0.580 H15 3XB 40 3XB H16 H16 H 0 1 N N N -0.698 10.083 65.220 6.221 -1.548 -0.061 H16 3XB 41 3XB "H2'" "H2'" H 0 1 N N N -1.801 4.806 61.666 -1.335 -2.802 1.700 "H2'" 3XB 42 3XB "H2'A" "H2'A" H 0 0 N N N -2.693 3.597 60.713 -1.923 -4.348 1.013 "H2'A" 3XB 43 3XB "H3'" "H3'" H 0 1 N N N -2.658 2.376 62.649 -2.593 -3.345 -0.992 "H3'" 3XB 44 3XB H3AA H3AA H 0 0 N N N -0.575 -1.052 62.154 -3.070 2.048 1.217 H3AA 3XB 45 3XB "H4'" "H4'" H 0 1 N N N -1.047 0.840 61.618 -4.271 -1.798 -0.696 "H4'" 3XB 46 3XB "H5'" "H5'" H 0 1 N N N 0.399 1.720 60.077 -4.920 -1.585 1.544 "H5'" 3XB 47 3XB "H5'A" "H5'A" H 0 0 N N N 1.198 2.757 61.279 -3.312 -0.979 2.050 "H5'A" 3XB 48 3XB H5A H5A H 0 1 N N N 3.385 -2.587 61.476 -6.955 3.267 -0.082 H5A 3XB 49 3XB HN6A HN6A H 0 0 N N N 4.739 0.495 62.892 -8.007 1.849 -1.724 HN6A 3XB 50 3XB HN6B HN6B H 0 0 N N N 4.989 -1.110 63.061 -7.276 0.464 -2.332 HN6B 3XB 51 3XB H7A H7A H 0 1 N N N -0.433 0.976 64.036 -2.464 -0.126 -1.316 H7A 3XB 52 3XB H7AA H7AA H 0 0 N N N 0.844 2.140 63.595 -2.149 0.098 0.421 H7AA 3XB 53 3XB H8A H8A H 0 1 N N N 0.547 -3.105 60.088 -4.497 4.842 1.068 H8A 3XB 54 3XB H8AA H8AA H 0 0 N N N 1.360 -4.087 61.354 -5.945 4.263 1.926 H8AA 3XB 55 3XB H8AB H8AB H 0 0 N N N -0.274 -3.405 61.657 -4.327 3.755 2.467 H8AB 3XB 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3XB O1 C1 SING N N 1 3XB C2 C1 SING N N 2 3XB C1 H1 SING N N 3 3XB C1 H1A SING N N 4 3XB "C3'" O1 SING N N 5 3XB C2 N2 SING N N 6 3XB C2 H2 SING N N 7 3XB C2 H2A SING N N 8 3XB N2 C3 SING N N 9 3XB N2 HN2 SING N N 10 3XB C3 C4 SING N N 11 3XB C3 H3 SING N N 12 3XB C3 H3A SING N N 13 3XB F6 C4 SING N N 14 3XB C4 C11 SING N N 15 3XB C4 F5 SING N N 16 3XB "N1'" "C5'" SING N N 17 3XB "N1'" "C2'" SING N N 18 3XB "N1'" "HN1'" SING N N 19 3XB C16 C11 DOUB Y N 20 3XB C11 C12 SING Y N 21 3XB C12 C13 DOUB Y N 22 3XB C12 H12 SING N N 23 3XB C14 C13 SING Y N 24 3XB C13 F13 SING N N 25 3XB C15 C14 DOUB Y N 26 3XB C14 H14 SING N N 27 3XB C16 C15 SING Y N 28 3XB C15 H15 SING N N 29 3XB C16 H16 SING N N 30 3XB C6A N1A DOUB Y N 31 3XB C2A N1A SING Y N 32 3XB "C2'" "C3'" SING N N 33 3XB "C2'" "H2'" SING N N 34 3XB "C2'" "H2'A" SING N N 35 3XB C3A C2A DOUB Y N 36 3XB C2A C7A SING N N 37 3XB "C4'" "C3'" SING N N 38 3XB "C3'" "H3'" SING N N 39 3XB C4A C3A SING Y N 40 3XB C3A H3AA SING N N 41 3XB "C5'" "C4'" SING N N 42 3XB "C4'" C7A SING N N 43 3XB "C4'" "H4'" SING N N 44 3XB C8A C4A SING N N 45 3XB C4A C5A DOUB Y N 46 3XB "C5'" "H5'" SING N N 47 3XB "C5'" "H5'A" SING N N 48 3XB C5A C6A SING Y N 49 3XB C5A H5A SING N N 50 3XB C6A N6A SING N N 51 3XB N6A HN6A SING N N 52 3XB N6A HN6B SING N N 53 3XB C7A H7A SING N N 54 3XB C7A H7AA SING N N 55 3XB C8A H8A SING N N 56 3XB C8A H8AA SING N N 57 3XB C8A H8AB SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3XB SMILES ACDLabs 12.01 "Fc1cccc(c1)C(F)(F)CNCCOC2C(CNC2)Cc3nc(N)cc(c3)C" 3XB SMILES_CANONICAL CACTVS 3.370 "Cc1cc(N)nc(C[C@@H]2CNC[C@@H]2OCCNCC(F)(F)c3cccc(F)c3)c1" 3XB SMILES CACTVS 3.370 "Cc1cc(N)nc(C[CH]2CNC[CH]2OCCNCC(F)(F)c3cccc(F)c3)c1" 3XB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "Cc1cc(nc(c1)N)C[C@@H]2CNC[C@@H]2OCCNCC(c3cccc(c3)F)(F)F" 3XB SMILES "OpenEye OEToolkits" 1.7.0 "Cc1cc(nc(c1)N)CC2CNCC2OCCNCC(c3cccc(c3)F)(F)F" 3XB InChI InChI 1.03 "InChI=1S/C21H27F3N4O/c1-14-7-18(28-20(25)8-14)9-15-11-27-12-19(15)29-6-5-26-13-21(23,24)16-3-2-4-17(22)10-16/h2-4,7-8,10,15,19,26-27H,5-6,9,11-13H2,1H3,(H2,25,28)/t15-,19+/m1/s1" 3XB InChIKey InChI 1.03 IRAITVAESBBILD-BEFAXECRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3XB "SYSTEMATIC NAME" ACDLabs 12.01 "6-{[(3R,4R)-4-(2-{[2,2-difluoro-2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine" 3XB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "6-[[(3R,4R)-4-[2-[[2,2-difluoro-2-(3-fluorophenyl)ethyl]amino]ethoxy]pyrrolidin-3-yl]methyl]-4-methyl-pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3XB "Create component" 2010-06-25 RCSB 3XB "Modify aromatic_flag" 2011-06-04 RCSB 3XB "Modify descriptor" 2011-06-04 RCSB #