data_3Y5 # _chem_comp.id 3Y5 _chem_comp.name "1-{(1S)-1-[4-(3-amino-1H-indazol-6-yl)-5-chloro-1H-imidazol-2-yl]-2-phenylethyl}-3-[5-chloro-2-(1H-tetrazol-1-yl)benzyl]urea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H23 Cl2 N11 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-12-09 _chem_comp.pdbx_modified_date 2015-02-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 588.451 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3Y5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4X6N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3Y5 N14 N1 N 0 1 Y N N 42.244 -21.017 29.696 -3.036 0.388 0.259 N14 3Y5 1 3Y5 C13 C1 C 0 1 Y N N 43.534 -20.976 29.217 -3.842 -0.616 -0.144 C13 3Y5 2 3Y5 C18 C2 C 0 1 Y N N 45.610 -22.435 31.994 -7.372 -1.250 -1.235 C18 3Y5 3 3Y5 C17 C3 C 0 1 Y N N 45.894 -20.601 29.888 -6.023 0.106 0.801 C17 3Y5 4 3Y5 C16 C4 C 0 1 Y N N 44.654 -21.182 30.154 -5.324 -0.587 -0.178 C16 3Y5 5 3Y5 C19 C5 C 0 1 Y N N 44.517 -22.076 31.224 -6.011 -1.263 -1.194 C19 3Y5 6 3Y5 C20 C6 C 0 1 N N N 39.275 -18.613 29.259 1.788 0.394 0.774 C20 3Y5 7 3Y5 C23 C7 C 0 1 N N N 37.592 -17.352 27.917 4.170 0.022 1.129 C23 3Y5 8 3Y5 C24 C8 C 0 1 Y N N 36.918 -15.994 27.902 5.264 -0.852 0.571 C24 3Y5 9 3Y5 C12 C9 C 0 1 Y N N 43.524 -20.760 27.881 -3.052 -1.660 -0.514 C12 3Y5 10 3Y5 C27 C10 C 0 1 Y N N 35.693 -13.472 27.953 7.276 -2.456 -0.454 C27 3Y5 11 3Y5 C1 C11 C 0 1 Y N N 40.796 -24.152 27.417 1.705 2.998 -0.473 C1 3Y5 12 3Y5 C2 C12 C 0 1 Y N N 40.007 -23.381 28.261 0.488 3.056 0.179 C2 3Y5 13 3Y5 C3 C13 C 0 1 Y N N 39.824 -23.815 29.568 0.312 3.929 1.237 C3 3Y5 14 3Y5 C4 C14 C 0 1 Y N N 40.459 -24.954 30.036 1.353 4.742 1.642 C4 3Y5 15 3Y5 C5 C15 C 0 1 Y N N 41.258 -25.696 29.196 2.570 4.683 0.990 C5 3Y5 16 3Y5 C6 C16 C 0 1 Y N N 41.419 -25.299 27.881 2.747 3.810 -0.067 C6 3Y5 17 3Y5 C7 C17 C 0 1 N N N 39.486 -22.034 27.809 -0.648 2.170 -0.263 C7 3Y5 18 3Y5 C8 C18 C 0 1 N N S 39.983 -20.873 28.689 -0.590 0.847 0.504 C8 3Y5 19 3Y5 N9 N2 N 0 1 N N N 39.364 -19.604 28.314 0.631 0.124 0.139 N9 3Y5 20 3Y5 C10 C19 C 0 1 Y N N 41.479 -20.821 28.644 -1.793 0.010 0.153 C10 3Y5 21 3Y5 N11 N3 N 0 1 Y N N 42.203 -20.655 27.507 -1.759 -1.260 -0.325 N11 3Y5 22 3Y5 CL CL1 CL 0 0 N N N 44.781 -20.606 26.750 -3.584 -3.201 -1.111 CL 3Y5 23 3Y5 N21 N4 N 0 1 N N N 38.681 -17.451 28.886 2.912 -0.271 0.439 N21 3Y5 24 3Y5 O22 O1 O 0 1 N N N 39.778 -18.745 30.379 1.820 1.237 1.650 O22 3Y5 25 3Y5 C25 C20 C 0 1 Y N N 37.405 -14.950 27.096 5.886 -0.509 -0.622 C25 3Y5 26 3Y5 C26 C21 C 0 1 Y N N 36.790 -13.695 27.133 6.894 -1.315 -1.134 C26 3Y5 27 3Y5 C28 C22 C 0 1 Y N N 35.213 -14.511 28.725 6.659 -2.792 0.737 C28 3Y5 28 3Y5 C29 C23 C 0 1 Y N N 35.814 -15.753 28.715 5.654 -1.990 1.249 C29 3Y5 29 3Y5 CL2 CL2 CL 0 0 N N N 33.781 -14.270 29.702 7.146 -4.222 1.592 CL2 3Y5 30 3Y5 N31 N5 N 0 1 Y N N 38.555 -15.118 26.259 5.496 0.649 -1.311 N31 3Y5 31 3Y5 C32 C24 C 0 1 Y N N 38.717 -15.086 24.926 5.991 1.116 -2.477 C32 3Y5 32 3Y5 N33 N6 N 0 1 Y N N 39.956 -15.366 24.626 5.342 2.215 -2.762 N33 3Y5 33 3Y5 N34 N7 N 0 1 Y N N 40.582 -15.573 25.813 4.471 2.474 -1.855 N34 3Y5 34 3Y5 N35 N8 N 0 1 Y N N 39.760 -15.417 26.804 4.500 1.570 -0.937 N35 3Y5 35 3Y5 C36 C25 C 0 1 Y N N 46.873 -21.922 31.699 -8.094 -0.552 -0.261 C36 3Y5 36 3Y5 C37 C26 C 0 1 Y N N 46.996 -21.006 30.635 -7.413 0.131 0.766 C37 3Y5 37 3Y5 N38 N9 N 0 1 Y N N 48.320 -20.721 30.515 -8.370 0.708 1.561 N38 3Y5 38 3Y5 N39 N10 N 0 1 Y N N 49.068 -21.384 31.447 -9.636 0.405 1.051 N39 3Y5 39 3Y5 C40 C27 C 0 1 Y N N 48.243 -22.121 32.192 -9.522 -0.336 -0.020 C40 3Y5 40 3Y5 N41 N11 N 0 1 N N N 48.677 -22.855 33.221 -10.574 -0.832 -0.795 N41 3Y5 41 3Y5 H53 H2 H 0 1 N N N 45.484 -23.114 32.825 -7.894 -1.774 -2.022 H53 3Y5 42 3Y5 H52 H3 H 0 1 N N N 45.997 -19.851 29.117 -5.490 0.626 1.583 H52 3Y5 43 3Y5 H54 H4 H 0 1 N N N 43.546 -22.491 31.451 -5.457 -1.799 -1.951 H54 3Y5 44 3Y5 H56 H5 H 0 1 N N N 36.837 -18.113 28.163 4.055 -0.177 2.195 H56 3Y5 45 3Y5 H57 H6 H 0 1 N N N 37.999 -17.550 26.914 4.431 1.070 0.981 H57 3Y5 46 3Y5 H59 H7 H 0 1 N N N 35.222 -12.501 27.987 8.060 -3.083 -0.852 H59 3Y5 47 3Y5 H42 H8 H 0 1 N N N 40.925 -23.854 26.387 1.844 2.313 -1.297 H42 3Y5 48 3Y5 H43 H9 H 0 1 N N N 39.177 -23.257 30.229 -0.640 3.975 1.746 H43 3Y5 49 3Y5 H44 H10 H 0 1 N N N 40.327 -25.261 31.063 1.216 5.424 2.468 H44 3Y5 50 3Y5 H45 H11 H 0 1 N N N 41.756 -26.582 29.561 3.384 5.319 1.307 H45 3Y5 51 3Y5 H46 H12 H 0 1 N N N 42.033 -25.885 27.213 3.697 3.765 -0.577 H46 3Y5 52 3Y5 H48 H13 H 0 1 N N N 39.818 -21.858 26.775 -1.597 2.666 -0.060 H48 3Y5 53 3Y5 H47 H14 H 0 1 N N N 38.387 -22.054 27.842 -0.561 1.974 -1.332 H47 3Y5 54 3Y5 H49 H15 H 0 1 N N N 39.689 -21.103 29.724 -0.587 1.048 1.575 H49 3Y5 55 3Y5 H50 H16 H 0 1 N N N 39.013 -19.461 27.389 0.606 -0.549 -0.559 H50 3Y5 56 3Y5 H51 H17 H 0 1 N N N 41.849 -20.490 26.586 -0.963 -1.787 -0.500 H51 3Y5 57 3Y5 H55 H18 H 0 1 N N N 39.011 -16.604 29.303 2.887 -0.944 -0.259 H55 3Y5 58 3Y5 H58 H19 H 0 1 N N N 37.172 -12.893 26.519 7.379 -1.051 -2.062 H58 3Y5 59 3Y5 H60 H20 H 0 1 N N N 35.426 -16.543 29.341 5.174 -2.254 2.180 H60 3Y5 60 3Y5 H61 H21 H 0 1 N N N 37.940 -14.862 24.211 6.777 0.666 -3.065 H61 3Y5 61 3Y5 H62 H22 H 0 1 N N N 48.700 -20.102 29.828 -8.195 1.241 2.353 H62 3Y5 62 3Y5 H63 H23 H 0 1 N N N 49.667 -22.749 33.313 -10.386 -1.376 -1.576 H63 3Y5 63 3Y5 H64 H24 H 0 1 N N N 48.230 -22.548 34.061 -11.491 -0.632 -0.552 H64 3Y5 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3Y5 N33 C32 DOUB Y N 1 3Y5 N33 N34 SING Y N 2 3Y5 C32 N31 SING Y N 3 3Y5 N34 N35 DOUB Y N 4 3Y5 N31 N35 SING Y N 5 3Y5 N31 C25 SING N N 6 3Y5 CL C12 SING N N 7 3Y5 C25 C26 DOUB Y N 8 3Y5 C25 C24 SING Y N 9 3Y5 C26 C27 SING Y N 10 3Y5 C1 C6 DOUB Y N 11 3Y5 C1 C2 SING Y N 12 3Y5 N11 C12 SING Y N 13 3Y5 N11 C10 SING Y N 14 3Y5 C7 C2 SING N N 15 3Y5 C7 C8 SING N N 16 3Y5 C12 C13 DOUB Y N 17 3Y5 C6 C5 SING Y N 18 3Y5 C24 C23 SING N N 19 3Y5 C24 C29 DOUB Y N 20 3Y5 C23 N21 SING N N 21 3Y5 C27 C28 DOUB Y N 22 3Y5 C2 C3 DOUB Y N 23 3Y5 N9 C8 SING N N 24 3Y5 N9 C20 SING N N 25 3Y5 C10 C8 SING N N 26 3Y5 C10 N14 DOUB Y N 27 3Y5 C29 C28 SING Y N 28 3Y5 C28 CL2 SING N N 29 3Y5 N21 C20 SING N N 30 3Y5 C5 C4 DOUB Y N 31 3Y5 C13 N14 SING Y N 32 3Y5 C13 C16 SING N N 33 3Y5 C20 O22 DOUB N N 34 3Y5 C3 C4 SING Y N 35 3Y5 C17 C16 DOUB Y N 36 3Y5 C17 C37 SING Y N 37 3Y5 C16 C19 SING Y N 38 3Y5 N38 C37 SING Y N 39 3Y5 N38 N39 SING Y N 40 3Y5 C37 C36 DOUB Y N 41 3Y5 C19 C18 DOUB Y N 42 3Y5 N39 C40 DOUB Y N 43 3Y5 C36 C18 SING Y N 44 3Y5 C36 C40 SING Y N 45 3Y5 C40 N41 SING N N 46 3Y5 C18 H53 SING N N 47 3Y5 C17 H52 SING N N 48 3Y5 C19 H54 SING N N 49 3Y5 C23 H56 SING N N 50 3Y5 C23 H57 SING N N 51 3Y5 C27 H59 SING N N 52 3Y5 C1 H42 SING N N 53 3Y5 C3 H43 SING N N 54 3Y5 C4 H44 SING N N 55 3Y5 C5 H45 SING N N 56 3Y5 C6 H46 SING N N 57 3Y5 C7 H48 SING N N 58 3Y5 C7 H47 SING N N 59 3Y5 C8 H49 SING N N 60 3Y5 N9 H50 SING N N 61 3Y5 N11 H51 SING N N 62 3Y5 N21 H55 SING N N 63 3Y5 C26 H58 SING N N 64 3Y5 C29 H60 SING N N 65 3Y5 C32 H61 SING N N 66 3Y5 N38 H62 SING N N 67 3Y5 N41 H63 SING N N 68 3Y5 N41 H64 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3Y5 SMILES ACDLabs 12.01 "Clc2cc(c(n1nnnc1)cc2)CNC(=O)NC(c5nc(c3ccc4c(c3)nnc4N)c(Cl)n5)Cc6ccccc6" 3Y5 InChI InChI 1.03 "InChI=1S/C27H23Cl2N11O/c28-18-7-9-22(40-14-32-38-39-40)17(11-18)13-31-27(41)33-21(10-15-4-2-1-3-5-15)26-34-23(24(29)35-26)16-6-8-19-20(12-16)36-37-25(19)30/h1-9,11-12,14,21H,10,13H2,(H,34,35)(H3,30,36,37)(H2,31,33,41)/t21-/m0/s1" 3Y5 InChIKey InChI 1.03 LCVIWSIVTGTOCS-NRFANRHFSA-N 3Y5 SMILES_CANONICAL CACTVS 3.385 "Nc1n[nH]c2cc(ccc12)c3nc([nH]c3Cl)[C@H](Cc4ccccc4)NC(=O)NCc5cc(Cl)ccc5n6cnnn6" 3Y5 SMILES CACTVS 3.385 "Nc1n[nH]c2cc(ccc12)c3nc([nH]c3Cl)[CH](Cc4ccccc4)NC(=O)NCc5cc(Cl)ccc5n6cnnn6" 3Y5 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)C[C@@H](c2[nH]c(c(n2)c3ccc4c(c3)[nH]nc4N)Cl)NC(=O)NCc5cc(ccc5n6cnnn6)Cl" 3Y5 SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)CC(c2[nH]c(c(n2)c3ccc4c(c3)[nH]nc4N)Cl)NC(=O)NCc5cc(ccc5n6cnnn6)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3Y5 "SYSTEMATIC NAME" ACDLabs 12.01 "1-{(1S)-1-[4-(3-amino-1H-indazol-6-yl)-5-chloro-1H-imidazol-2-yl]-2-phenylethyl}-3-[5-chloro-2-(1H-tetrazol-1-yl)benzyl]urea" 3Y5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-[(1S)-1-[4-(3-azanyl-1H-indazol-6-yl)-5-chloranyl-1H-imidazol-2-yl]-2-phenyl-ethyl]-3-[[5-chloranyl-2-(1,2,3,4-tetrazol-1-yl)phenyl]methyl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3Y5 "Create component" 2014-12-09 RCSB 3Y5 "Initial release" 2015-02-18 RCSB #