data_3YQ # _chem_comp.id 3YQ _chem_comp.name "{[(3-methylpyridin-2-yl)amino]methanediyl}bis(phosphonic acid)" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H12 N2 O6 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-12-11 _chem_comp.pdbx_modified_date 2015-04-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 282.128 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3YQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4RXE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3YQ O5 O5 O 0 1 N N N 24.950 -15.242 8.107 -2.115 -2.294 -0.324 O5 3YQ 1 3YQ P1 P1 P 0 1 N N N 25.968 -14.138 7.994 -0.883 -1.508 0.351 P1 3YQ 2 3YQ O6 O6 O 0 1 N N N 25.483 -12.710 7.932 -1.209 -1.230 1.903 O6 3YQ 3 3YQ O2 O2 O 0 1 N N N 27.295 -14.428 7.466 0.344 -2.328 0.243 O2 3YQ 4 3YQ C6 C6 C 0 1 N N N 26.537 -13.985 9.770 -0.630 0.079 -0.510 C6 3YQ 5 3YQ P2 P2 P 0 1 N N N 25.150 -13.722 10.970 -2.141 1.090 -0.378 P2 3YQ 6 3YQ O3 O3 O 0 1 N N N 24.543 -12.507 10.451 -1.936 2.378 -1.077 O3 3YQ 7 3YQ O1 O1 O 0 1 N N N 25.805 -13.495 12.256 -3.374 0.304 -1.053 O1 3YQ 8 3YQ O4 O4 O 0 1 N N N 24.273 -14.979 10.738 -2.467 1.368 1.174 O4 3YQ 9 3YQ N1 N1 N 0 1 N N N 27.152 -15.205 10.089 0.491 0.795 0.104 N1 3YQ 10 3YQ C1 C1 C 0 1 Y N N 28.071 -15.319 11.066 1.796 0.383 -0.141 C1 3YQ 11 3YQ N2 N2 N 0 1 Y N N 28.228 -14.370 12.014 2.019 -0.654 -0.934 N2 3YQ 12 3YQ C5 C5 C 0 1 Y N N 29.141 -14.505 13.051 3.242 -1.077 -1.192 C5 3YQ 13 3YQ C4 C4 C 0 1 Y N N 29.905 -15.642 13.095 4.340 -0.449 -0.640 C4 3YQ 14 3YQ C3 C3 C 0 1 Y N N 29.763 -16.609 12.127 4.149 0.642 0.198 C3 3YQ 15 3YQ C2 C2 C 0 1 Y N N 28.844 -16.487 11.099 2.856 1.066 0.445 C2 3YQ 16 3YQ C7 C7 C 0 1 N N N 28.756 -17.555 10.133 2.599 2.249 1.343 C7 3YQ 17 3YQ H1 H1 H 0 1 N N N 25.329 -16.056 7.795 -2.954 -1.814 -0.290 H1 3YQ 18 3YQ H2 H2 H 0 1 N N N 26.151 -12.165 7.533 -1.355 -2.032 2.423 H2 3YQ 19 3YQ H3 H3 H 0 1 N N N 27.208 -13.116 9.833 -0.409 -0.108 -1.561 H3 3YQ 20 3YQ H4 H4 H 0 1 N N N 25.705 -12.584 12.506 -4.212 0.784 -1.019 H4 3YQ 21 3YQ H5 H5 H 0 1 N N N 23.475 -14.730 10.287 -2.614 0.566 1.695 H5 3YQ 22 3YQ H6 H6 H 0 1 N N N 26.413 -15.834 10.329 0.323 1.556 0.681 H6 3YQ 23 3YQ H7 H7 H 0 1 N N N 29.246 -13.736 13.802 3.386 -1.926 -1.844 H7 3YQ 24 3YQ H8 H8 H 0 1 N N N 30.621 -15.779 13.892 5.337 -0.803 -0.856 H8 3YQ 25 3YQ H9 H9 H 0 1 N N N 30.387 -17.489 12.170 4.992 1.150 0.643 H9 3YQ 26 3YQ H10 H10 H 0 1 N N N 29.454 -17.360 9.305 2.492 1.908 2.372 H10 3YQ 27 3YQ H11 H11 H 0 1 N N N 29.017 -18.508 10.616 3.436 2.945 1.276 H11 3YQ 28 3YQ H12 H12 H 0 1 N N N 27.730 -17.612 9.742 1.684 2.751 1.029 H12 3YQ 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3YQ O2 P1 DOUB N N 1 3YQ O6 P1 SING N N 2 3YQ P1 O5 SING N N 3 3YQ P1 C6 SING N N 4 3YQ C6 N1 SING N N 5 3YQ C6 P2 SING N N 6 3YQ N1 C1 SING N N 7 3YQ C7 C2 SING N N 8 3YQ O3 P2 DOUB N N 9 3YQ O4 P2 SING N N 10 3YQ P2 O1 SING N N 11 3YQ C1 C2 DOUB Y N 12 3YQ C1 N2 SING Y N 13 3YQ C2 C3 SING Y N 14 3YQ N2 C5 DOUB Y N 15 3YQ C3 C4 DOUB Y N 16 3YQ C5 C4 SING Y N 17 3YQ O5 H1 SING N N 18 3YQ O6 H2 SING N N 19 3YQ C6 H3 SING N N 20 3YQ O1 H4 SING N N 21 3YQ O4 H5 SING N N 22 3YQ N1 H6 SING N N 23 3YQ C5 H7 SING N N 24 3YQ C4 H8 SING N N 25 3YQ C3 H9 SING N N 26 3YQ C7 H10 SING N N 27 3YQ C7 H11 SING N N 28 3YQ C7 H12 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3YQ SMILES ACDLabs 12.01 "O=P(O)(O)C(Nc1ncccc1C)P(=O)(O)O" 3YQ InChI InChI 1.03 "InChI=1S/C7H12N2O6P2/c1-5-3-2-4-8-6(5)9-7(16(10,11)12)17(13,14)15/h2-4,7H,1H3,(H,8,9)(H2,10,11,12)(H2,13,14,15)" 3YQ InChIKey InChI 1.03 NAIJOBGUXRHQJW-UHFFFAOYSA-N 3YQ SMILES_CANONICAL CACTVS 3.385 "Cc1cccnc1NC([P](O)(O)=O)[P](O)(O)=O" 3YQ SMILES CACTVS 3.385 "Cc1cccnc1NC([P](O)(O)=O)[P](O)(O)=O" 3YQ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1cccnc1NC(P(=O)(O)O)P(=O)(O)O" 3YQ SMILES "OpenEye OEToolkits" 1.7.6 "Cc1cccnc1NC(P(=O)(O)O)P(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3YQ "SYSTEMATIC NAME" ACDLabs 12.01 "{[(3-methylpyridin-2-yl)amino]methanediyl}bis(phosphonic acid)" 3YQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[[(3-methylpyridin-2-yl)amino]-phosphono-methyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3YQ "Create component" 2014-12-11 RCSB 3YQ "Initial release" 2015-04-15 RCSB #