data_42P # _chem_comp.id 42P _chem_comp.name "(1R,2S,3R,5R)-3-({5-(1,3-benzothiazol-2-yl)-6-chloro-2-[(3-methoxypropyl)amino]pyrimidin-4-yl}amino)-5-(hydroxymethyl)cyclopentane-1,2-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H26 Cl N5 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-01-22 _chem_comp.pdbx_modified_date 2015-05-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.980 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 42P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4XS2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 42P C01 C1 C 0 1 Y N N 30.360 8.675 -8.439 -0.034 -0.148 0.179 C01 42P 1 42P N02 N1 N 0 1 Y N N 29.817 7.989 -7.353 -1.283 -0.596 0.218 N02 42P 2 42P C03 C2 C 0 1 Y N N 30.173 6.707 -7.184 -2.307 0.243 0.159 C03 42P 3 42P N04 N2 N 0 1 Y N N 30.955 5.965 -7.991 -2.137 1.554 0.059 N04 42P 4 42P C05 C3 C 0 1 Y N N 31.484 6.605 -9.079 -0.926 2.084 0.014 C05 42P 5 42P C06 C4 C 0 1 Y N N 31.182 7.980 -9.444 0.188 1.240 0.073 C06 42P 6 42P N07 N3 N 0 1 N N N 29.968 9.999 -8.519 1.031 -1.026 0.247 N07 42P 7 42P N08 N4 N 0 1 N N N 29.618 6.120 -6.071 -3.592 -0.265 0.202 N08 42P 8 42P CL9 CL1 CL 0 0 N N N 32.422 5.469 -9.956 -0.722 3.803 -0.118 CL09 42P 9 42P C10 C5 C 0 1 Y N N 31.785 8.716 -10.559 1.557 1.788 0.026 C10 42P 10 42P C11 C6 C 0 1 N N R 28.946 10.719 -7.722 0.786 -2.466 0.363 C11 42P 11 42P C12 C7 C 0 1 N N S 29.467 11.033 -6.279 0.602 -3.106 -1.036 C12 42P 12 42P C13 C8 C 0 1 N N R 30.274 12.376 -6.485 0.967 -4.590 -0.823 C13 42P 13 42P C14 C9 C 0 1 N N R 29.403 13.192 -7.528 1.880 -4.645 0.414 C14 42P 14 42P C15 C10 C 0 1 N N N 28.526 12.124 -8.273 2.039 -3.193 0.910 C15 42P 15 42P O16 O1 O 0 1 N N N 28.385 11.317 -5.353 -0.754 -2.981 -1.469 O16 42P 16 42P O17 O2 O 0 1 N N N 30.398 13.119 -5.244 -0.217 -5.357 -0.592 O17 42P 17 42P C18 C11 C 0 1 N N N 30.281 14.109 -8.443 3.245 -5.222 0.032 C18 42P 18 42P O19 O3 O 0 1 N N N 30.395 15.427 -7.879 4.043 -5.377 1.207 O19 42P 19 42P C20 C12 C 0 1 N N N 28.507 6.624 -5.252 -4.740 0.642 0.138 C20 42P 20 42P C21 C13 C 0 1 N N N 28.166 5.576 -4.190 -6.035 -0.170 0.204 C21 42P 21 42P C22 C14 C 0 1 N N N 26.919 6.008 -3.391 -7.235 0.778 0.138 C22 42P 22 42P O23 O4 O 0 1 N N N 26.640 4.984 -2.412 -8.445 0.020 0.199 O23 42P 23 42P C24 C15 C 0 1 N N N 25.506 5.282 -1.595 -9.632 0.814 0.144 C24 42P 24 42P S25 S1 S 0 1 Y N N 33.203 8.138 -11.406 1.951 3.496 -0.104 S25 42P 25 42P C26 C16 C 0 1 Y N N 33.278 9.669 -12.310 3.671 3.115 -0.082 C26 42P 26 42P C27 C17 C 0 1 Y N N 32.179 10.491 -11.917 3.815 1.727 0.023 C27 42P 27 42P N28 N5 N 0 1 Y N N 31.406 9.925 -10.912 2.636 1.081 0.081 N28 42P 28 42P C29 C18 C 0 1 Y N N 34.192 10.129 -13.309 4.794 3.936 -0.153 C29 42P 29 42P C30 C19 C 0 1 Y N N 33.947 11.394 -13.940 6.057 3.387 -0.121 C30 42P 30 42P C31 C20 C 0 1 Y N N 32.916 12.229 -13.524 6.214 2.013 -0.018 C31 42P 31 42P C32 C21 C 0 1 Y N N 32.017 11.805 -12.567 5.120 1.189 0.059 C32 42P 32 42P H1 H1 H 0 1 N N N 30.810 10.517 -8.370 1.940 -0.689 0.217 H1 42P 33 42P H2 H2 H 0 1 N N N 29.317 5.218 -6.381 -3.733 -1.222 0.275 H2 42P 34 42P H3 H3 H 0 1 N N N 28.043 10.096 -7.637 -0.082 -2.659 0.993 H3 42P 35 42P H4 H4 H 0 1 N N N 30.131 10.233 -5.920 1.276 -2.645 -1.758 H4 42P 36 42P H5 H5 H 0 1 N N N 31.259 12.153 -6.921 1.495 -4.973 -1.696 H5 42P 37 42P H6 H6 H 0 1 N N N 28.724 13.841 -6.956 1.421 -5.257 1.190 H6 42P 38 42P H7 H7 H 0 1 N N N 28.709 12.175 -9.356 2.947 -2.748 0.503 H7 42P 39 42P H8 H8 H 0 1 N N N 27.460 12.305 -8.072 2.053 -3.162 1.999 H8 42P 40 42P H9 H9 H 0 1 N N N 28.744 11.501 -4.493 -0.926 -3.365 -2.339 H9 42P 41 42P H10 H10 H 0 1 N N N 30.921 12.621 -4.627 -0.844 -5.344 -1.328 H10 42P 42 42P H11 H11 H 0 1 N N N 29.815 14.180 -9.437 3.109 -6.192 -0.445 H11 42P 43 42P H12 H12 H 0 1 N N N 31.285 13.669 -8.539 3.745 -4.544 -0.660 H12 42P 44 42P H13 H13 H 0 1 N N N 30.930 15.969 -8.446 4.924 -5.738 1.040 H13 42P 45 42P H14 H14 H 0 1 N N N 28.804 7.564 -4.763 -4.703 1.336 0.978 H14 42P 46 42P H15 H15 H 0 1 N N N 27.629 6.804 -5.890 -4.709 1.202 -0.797 H15 42P 47 42P H16 H16 H 0 1 N N N 27.966 4.613 -4.682 -6.073 -0.863 -0.636 H16 42P 48 42P H17 H17 H 0 1 N N N 29.017 5.466 -3.502 -6.066 -0.729 1.139 H17 42P 49 42P H18 H18 H 0 1 N N N 27.113 6.965 -2.885 -7.197 1.471 0.978 H18 42P 50 42P H19 H19 H 0 1 N N N 26.061 6.119 -4.070 -7.204 1.337 -0.797 H19 42P 51 42P H20 H20 H 0 1 N N N 25.348 4.466 -0.874 -9.644 1.508 0.984 H20 42P 52 42P H21 H21 H 0 1 N N N 25.682 6.222 -1.052 -9.651 1.374 -0.791 H21 42P 53 42P H22 H22 H 0 1 N N N 24.614 5.387 -2.230 -10.506 0.164 0.197 H22 42P 54 42P H23 H23 H 0 1 N N N 35.051 9.535 -13.584 4.674 5.006 -0.233 H23 42P 55 42P H24 H24 H 0 1 N N N 34.579 11.705 -14.758 6.925 4.027 -0.181 H24 42P 56 42P H25 H25 H 0 1 N N N 32.818 13.215 -13.953 7.206 1.588 0.007 H25 42P 57 42P H26 H26 H 0 1 N N N 31.188 12.440 -12.292 5.258 0.120 0.140 H26 42P 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 42P C30 C31 DOUB Y N 1 42P C30 C29 SING Y N 2 42P C31 C32 SING Y N 3 42P C29 C26 DOUB Y N 4 42P C32 C27 DOUB Y N 5 42P C26 C27 SING Y N 6 42P C26 S25 SING Y N 7 42P C27 N28 SING Y N 8 42P S25 C10 SING Y N 9 42P N28 C10 DOUB Y N 10 42P C10 C06 SING N N 11 42P CL9 C05 SING N N 12 42P C06 C05 DOUB Y N 13 42P C06 C01 SING Y N 14 42P C05 N04 SING Y N 15 42P N07 C01 SING N N 16 42P N07 C11 SING N N 17 42P C18 O19 SING N N 18 42P C18 C14 SING N N 19 42P C01 N02 DOUB Y N 20 42P C15 C11 SING N N 21 42P C15 C14 SING N N 22 42P N04 C03 DOUB Y N 23 42P C11 C12 SING N N 24 42P C14 C13 SING N N 25 42P N02 C03 SING Y N 26 42P C03 N08 SING N N 27 42P C13 C12 SING N N 28 42P C13 O17 SING N N 29 42P C12 O16 SING N N 30 42P N08 C20 SING N N 31 42P C20 C21 SING N N 32 42P C21 C22 SING N N 33 42P C22 O23 SING N N 34 42P O23 C24 SING N N 35 42P N07 H1 SING N N 36 42P N08 H2 SING N N 37 42P C11 H3 SING N N 38 42P C12 H4 SING N N 39 42P C13 H5 SING N N 40 42P C14 H6 SING N N 41 42P C15 H7 SING N N 42 42P C15 H8 SING N N 43 42P O16 H9 SING N N 44 42P O17 H10 SING N N 45 42P C18 H11 SING N N 46 42P C18 H12 SING N N 47 42P O19 H13 SING N N 48 42P C20 H14 SING N N 49 42P C20 H15 SING N N 50 42P C21 H16 SING N N 51 42P C21 H17 SING N N 52 42P C22 H18 SING N N 53 42P C22 H19 SING N N 54 42P C24 H20 SING N N 55 42P C24 H21 SING N N 56 42P C24 H22 SING N N 57 42P C29 H23 SING N N 58 42P C30 H24 SING N N 59 42P C31 H25 SING N N 60 42P C32 H26 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 42P SMILES ACDLabs 12.01 "Clc4nc(nc(NC1CC(CO)C(O)C1O)c4c2nc3ccccc3s2)NCCCOC" 42P InChI InChI 1.03 "InChI=1S/C21H26ClN5O4S/c1-31-8-4-7-23-21-26-18(22)15(20-25-12-5-2-3-6-14(12)32-20)19(27-21)24-13-9-11(10-28)16(29)17(13)30/h2-3,5-6,11,13,16-17,28-30H,4,7-10H2,1H3,(H2,23,24,26,27)/t11-,13-,16-,17+/m1/s1" 42P InChIKey InChI 1.03 JCZKEQVPLPZLFI-ZPUIDXCVSA-N 42P SMILES_CANONICAL CACTVS 3.385 "COCCCNc1nc(Cl)c(c(N[C@@H]2C[C@H](CO)[C@@H](O)[C@H]2O)n1)c3sc4ccccc4n3" 42P SMILES CACTVS 3.385 "COCCCNc1nc(Cl)c(c(N[CH]2C[CH](CO)[CH](O)[CH]2O)n1)c3sc4ccccc4n3" 42P SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COCCCNc1nc(c(c(n1)Cl)c2nc3ccccc3s2)N[C@@H]4C[C@@H]([C@H]([C@H]4O)O)CO" 42P SMILES "OpenEye OEToolkits" 1.9.2 "COCCCNc1nc(c(c(n1)Cl)c2nc3ccccc3s2)NC4CC(C(C4O)O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 42P "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,3R,5R)-3-({5-(1,3-benzothiazol-2-yl)-6-chloro-2-[(3-methoxypropyl)amino]pyrimidin-4-yl}amino)-5-(hydroxymethyl)cyclopentane-1,2-diol" 42P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(1R,2S,3R,5R)-3-[[5-(1,3-benzothiazol-2-yl)-6-chloranyl-2-(3-methoxypropylamino)pyrimidin-4-yl]amino]-5-(hydroxymethyl)cyclopentane-1,2-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 42P "Create component" 2015-01-22 RCSB 42P "Initial release" 2015-05-13 RCSB #