5'-O-[(S)-hydroxy(methyl)phosphoryl]adenosine RNA linking ATOMN C11 H16 N5 O6 P A 0 2015-02-09 2019-05-07 N REL 345.248 A 45A N Corina N 4Y27 EBI P1 P 0 1 N N N 13.785 -10.798 -3.209 4.807 -0.994 -0.100 P 45A 1 O1 O 0 1 N N N 10.925 -13.718 -1.935 0.596 0.236 -0.519 O4' 45A 2 C1 C 0 1 N N R 10.802 -13.342 -3.277 1.566 1.280 -0.331 C4' 45A 3 C2 C 0 1 N N S 9.649 -12.382 -3.292 0.912 2.361 0.552 C3' 45A 4 C3 C 0 1 N N R 8.769 -13.052 -2.273 -0.526 1.838 0.788 C2' 45A 5 O2 O 0 1 N N N 9.040 -12.196 -4.538 0.882 3.615 -0.132 O3' 45A 6 C4 C 0 1 Y N N 9.264 -10.791 2.784 -5.014 -1.444 0.073 C6 45A 7 C5 C 0 1 N N R 9.748 -13.430 -1.225 -0.707 0.844 -0.387 C1' 45A 8 C6 C 0 1 Y N N 9.272 -12.324 0.922 -3.065 -0.073 -0.292 C4 45A 9 N1 N 0 1 Y N N 8.244 -13.042 1.419 -3.862 0.842 -0.834 N3 45A 10 C7 C 0 1 Y N N 7.849 -12.494 2.590 -5.159 0.632 -0.926 C2 45A 11 N2 N 0 1 Y N N 8.255 -11.437 3.274 -5.731 -0.473 -0.484 N1 45A 12 C8 C 0 1 N N N 14.318 -10.764 -4.865 5.403 -1.959 -1.527 C31 45A 13 O3 O 0 1 N N N 13.665 -9.504 -2.542 5.845 -0.019 0.304 OP2 45A 14 O4 O 0 1 N N N 12.408 -11.531 -3.163 3.462 -0.208 -0.507 O5' 45A 15 C9 C 0 1 N N N 12.100 -12.748 -3.834 2.808 0.717 0.363 C5' 45A 16 O5 O 0 1 N N N 8.089 -14.101 -2.857 -1.475 2.903 0.707 O2' 45A 17 N3 N 0 1 Y N N 9.996 -12.445 -0.196 -1.716 -0.166 -0.058 N9 45A 18 C10 C 0 1 Y N N 9.817 -11.170 1.572 -3.625 -1.269 0.189 C5 45A 19 N4 N 0 1 Y N N 10.887 -10.632 0.726 -2.608 -2.015 0.683 N7 45A 20 C11 C 0 1 Y N N 10.870 -11.505 -0.308 -1.487 -1.370 0.539 C8 45A 21 N5 N 0 1 N N N 9.824 -9.664 3.427 -5.623 -2.598 0.534 N6 45A 22 O6 O 0 1 N Y N 14.843 -11.782 -2.527 4.497 -1.988 1.129 O1 45A 23 H1 H 0 1 N N N 10.536 -14.217 -3.888 1.843 1.707 -1.296 H4' 45A 24 H2 H 0 1 N N N 9.987 -11.417 -2.887 1.445 2.454 1.498 H3' 45A 25 H3 H 0 1 N N N 8.067 -12.311 -1.864 -0.600 1.325 1.747 H2' 45A 26 H4 H 0 1 N N N 8.325 -11.576 -4.452 0.481 4.332 0.378 H1 45A 27 H5 H 0 1 N N N 9.388 -14.351 -0.743 -0.978 1.374 -1.300 H1' 45A 28 H6 H 0 1 N N N 7.038 -13.027 3.063 -5.778 1.396 -1.372 H2 45A 29 H7 H 0 0 N N N 15.289 -10.252 -4.928 5.612 -1.286 -2.358 H32 45A 30 H8 H 0 0 N N N 14.422 -11.794 -5.238 6.313 -2.491 -1.251 H33 45A 31 H9 H 0 0 N N N 13.579 -10.225 -5.477 4.638 -2.677 -1.824 H31 45A 32 H10 H 0 0 N N N 12.921 -13.464 -3.684 3.490 1.533 0.605 H5'1 45A 33 H11 H 0 0 N N N 11.978 -12.550 -4.909 2.511 0.207 1.280 H5'2 45A 34 H12 H 0 0 N N N 7.535 -14.520 -2.209 -1.345 3.597 1.367 HO2' 45A 35 H13 H 0 1 N N N 11.533 -11.421 -1.156 -0.518 -1.735 0.847 H8 45A 36 H14 H 0 1 N N N 9.323 -9.479 4.272 -6.584 -2.705 0.452 H61 45A 37 H15 H 0 1 N N N 10.784 -9.845 3.641 -5.089 -3.299 0.938 H62 45A 38 H16 H 0 1 N N N 15.235 -11.354 -1.775 5.265 -2.495 1.427 H3 45A 39 sing N N 1 sing N N 2 sing N N 3 sing N N 4 sing N N 5 sing N N 6 sing N N 7 sing N N 8 doub N N 9 sing N N 10 sing N N 11 sing N N 12 sing N N 13 sing Y N 14 doub Y N 15 sing Y N 16 sing Y N 17 doub Y N 18 sing Y N 19 sing Y N 20 doub Y N 21 doub Y N 22 sing Y N 23 sing N N 24 sing N N 25 sing N N 26 sing N N 27 sing N N 28 sing N N 29 sing N N 30 sing N N 31 sing N N 32 sing N N 33 sing N N 34 sing N N 35 sing N N 36 sing N N 37 sing N N 38 sing N N 39 sing N N 40 sing N N 41 O=P(O)(OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O)C InChI=1S/C11H16N5O6P/c1-23(19,20)21-2-5-7(17)8(18)11(22-5)16-4-15-6-9(12)13-3-14-10(6)16/h3-5,7-8,11,17-18H,2H2,1H3,(H,19,20)(H2,12,13,14)/t5-,7-,8-,11-/m1/s1 PXSSQXBLDTZHLF-IOSLPCCCSA-N C[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23 C[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23 CP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O CP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O 5'-O-[(S)-hydroxy(methyl)phosphoryl]adenosine [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-methyl-phosphinic acid EBI RCSB EBI