data_46I # _chem_comp.id 46I _chem_comp.name "beta-D-glucopyranosyl 1,3,4,6-tetrakisphosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H16 O18 P4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(2S,3R,4R,5R,6R)-3-oxidanyl-2,5-diphosphonooxy-6-(phosphonooxymethyl)oxan-4-yl] dihydrogen phosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-12 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 500.075 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 46I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PPG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 46I C1 C1 C 0 1 N N S N N N 10.930 29.329 83.894 0.764 1.940 -0.112 C1 46I 1 46I C2 C2 C 0 1 N N R N N N 10.860 29.493 85.407 -0.674 2.013 -0.630 C2 46I 2 46I C3 C3 C 0 1 N N R N N N 12.259 29.353 85.979 -1.501 0.901 0.024 C3 46I 3 46I C4 C4 C 0 1 N N R N N N 12.762 27.993 85.584 -0.844 -0.451 -0.272 C4 46I 4 46I C5 C5 C 0 1 N N R N N N 12.872 27.973 84.074 0.601 -0.428 0.231 C5 46I 5 46I C6 C6 C 0 1 N N N N N N 13.443 26.696 83.538 1.282 -1.754 -0.114 C6 46I 6 46I O2 O1 O 0 1 N N N N N N 10.296 30.756 85.733 -1.237 3.284 -0.300 O2 46I 7 46I O5 O2 O 0 1 N N N N N N 11.547 28.099 83.534 1.305 0.647 -0.393 O5 46I 8 46I O6 O3 O 0 1 N N N N N N 13.449 26.868 82.112 2.592 -1.779 0.457 O6 46I 9 46I O01 O4 O 0 1 N N N N N N 9.700 29.312 83.333 1.555 2.938 -0.760 O01 46I 10 46I O04 O5 O 0 1 N N N N N N 10.110 28.997 80.957 3.777 2.604 0.390 O04 46I 11 46I O03 O6 O 0 1 N N N N N N 7.753 29.550 81.653 3.549 4.613 -1.121 O03 46I 12 46I O02 O7 O 0 1 N N N N N N 9.564 31.287 81.889 2.329 4.504 1.205 O02 46I 13 46I P1 P1 P 0 1 N N N N N N 9.224 29.815 81.873 2.823 3.642 -0.062 P1 46I 14 46I O11 O8 O 0 1 N N N N N N 14.187 25.855 87.638 -3.095 -3.611 0.658 O11 46I 15 46I O12 O9 O 0 1 N N N N N N 15.040 28.113 88.440 -1.136 -3.612 -1.095 O12 46I 16 46I O08 O10 O 0 1 N N N N N N 12.260 29.444 87.412 -2.827 0.915 -0.508 O08 46I 17 46I P4 P2 P 0 1 N N N N N N 14.983 27.098 87.315 -2.266 -2.710 -0.387 P4 46I 18 46I O05 O11 O 0 1 N N N N N N 12.233 30.043 89.899 -4.296 -0.087 1.429 O05 46I 19 46I O06 O12 O 0 1 N N N N N N 11.410 31.580 88.048 -3.993 2.405 1.163 O06 46I 20 46I O10 O13 O 0 1 N N N N N N 16.336 26.819 86.689 -3.186 -2.176 -1.416 O10 46I 21 46I O09 O14 O 0 1 N N N N N N 14.036 27.779 86.195 -1.566 -1.488 0.394 O09 46I 22 46I O07 O15 O 0 1 N N N N N N 13.882 31.107 88.305 -5.437 1.229 -0.541 O07 46I 23 46I P3 P3 P 0 1 N N N N N N 12.472 30.601 88.518 -4.135 1.143 0.402 P3 46I 24 46I P6 P4 P 0 1 N N N N N N 14.869 27.240 81.419 3.596 -3.027 0.293 P6 46I 25 46I O16 O16 O 0 1 N N N N N N 15.892 26.209 81.858 4.000 -3.191 -1.257 O16 46I 26 46I O17 O17 O 0 1 N N N N N N 15.214 28.625 81.917 4.922 -2.768 1.169 O17 46I 27 46I O18 O18 O 0 1 N N N N N N 14.577 27.183 79.930 2.928 -4.262 0.761 O18 46I 28 46I H1 H1 H 0 1 N N N N N N 11.522 30.163 83.490 0.773 2.111 0.964 H1 46I 29 46I H2 H2 H 0 1 N N N N N N 10.233 28.687 85.816 -0.679 1.882 -1.712 H2 46I 30 46I H3 H3 H 0 1 N N N N N N 12.909 30.126 85.544 -1.539 1.061 1.102 H3 46I 31 46I H4 H4 H 0 1 N N N N N N 12.043 27.226 85.908 -0.854 -0.632 -1.347 H4 46I 32 46I H5 H5 H 0 1 N N N N N N 13.497 28.817 83.747 0.607 -0.287 1.312 H5 46I 33 46I H6 H6 H 0 1 N N N N N N 12.813 25.840 83.823 0.695 -2.580 0.287 H6 46I 34 46I H7 H7 H 0 1 N N N N N N 14.465 26.540 83.914 1.356 -1.853 -1.197 H7 46I 35 46I H8 H8 H 0 1 N N N N N N 10.672 31.071 86.547 -0.760 4.035 -0.678 H8 46I 36 46I H9 H9 H 0 1 N N N N N N 7.647 28.904 80.965 4.324 5.071 -0.768 H9 46I 37 46I H10 H10 H 0 1 N N N N N N 10.296 31.450 81.305 1.700 5.204 0.983 H10 46I 38 46I H11 H11 H 0 1 N N N N N N 14.684 25.086 87.386 -3.544 -4.367 0.256 H11 46I 39 46I H12 H12 H 0 1 N N N N N N 15.936 28.404 88.559 -0.496 -3.996 -0.480 H12 46I 40 46I H13 H13 H 0 1 N N N N N N 11.432 30.409 90.255 -4.394 -0.947 0.999 H13 46I 41 46I H14 H14 H 0 1 N N N N N N 13.853 31.968 87.905 -6.264 1.366 -0.058 H14 46I 42 46I H15 H15 H 0 1 N N N N N N 16.173 25.701 81.106 4.443 -2.417 -1.632 H15 46I 43 46I H16 H16 H 0 1 N N N N N N 15.188 29.238 81.192 5.573 -3.481 1.117 H16 46I 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 46I O18 P6 DOUB N N 1 46I O04 P1 DOUB N N 2 46I P6 O16 SING N N 3 46I P6 O17 SING N N 4 46I P6 O6 SING N N 5 46I O03 P1 SING N N 6 46I P1 O02 SING N N 7 46I P1 O01 SING N N 8 46I O6 C6 SING N N 9 46I O01 C1 SING N N 10 46I O5 C1 SING N N 11 46I O5 C5 SING N N 12 46I C6 C5 SING N N 13 46I C1 C2 SING N N 14 46I C5 C4 SING N N 15 46I C2 O2 SING N N 16 46I C2 C3 SING N N 17 46I C4 C3 SING N N 18 46I C4 O09 SING N N 19 46I C3 O08 SING N N 20 46I O09 P4 SING N N 21 46I O10 P4 DOUB N N 22 46I P4 O11 SING N N 23 46I P4 O12 SING N N 24 46I O08 P3 SING N N 25 46I O06 P3 DOUB N N 26 46I O07 P3 SING N N 27 46I P3 O05 SING N N 28 46I C1 H1 SING N N 29 46I C2 H2 SING N N 30 46I C3 H3 SING N N 31 46I C4 H4 SING N N 32 46I C5 H5 SING N N 33 46I C6 H6 SING N N 34 46I C6 H7 SING N N 35 46I O2 H8 SING N N 36 46I O03 H9 SING N N 37 46I O02 H10 SING N N 38 46I O11 H11 SING N N 39 46I O12 H12 SING N N 40 46I O05 H13 SING N N 41 46I O07 H14 SING N N 42 46I O16 H15 SING N N 43 46I O17 H16 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 46I InChI InChI 1.06 "InChI=1S/C6H16O18P4/c7-3-5(23-27(14,15)16)4(22-26(11,12)13)2(1-20-25(8,9)10)21-6(3)24-28(17,18)19/h2-7H,1H2,(H2,8,9,10)(H2,11,12,13)(H2,14,15,16)(H2,17,18,19)/t2-,3-,4-,5-,6+/m1/s1" 46I InChIKey InChI 1.06 HWPKOYDCMYQLFR-UKFBFLRUSA-N 46I SMILES_CANONICAL CACTVS 3.385 "O[C@H]1[C@@H](O[C@H](CO[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O)O[P](O)(O)=O" 46I SMILES CACTVS 3.385 "O[CH]1[CH](O[CH](CO[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O)O[P](O)(O)=O" 46I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O" 46I SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id 46I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},3~{R},4~{R},5~{R},6~{R})-3-oxidanyl-2,5-diphosphonooxy-6-(phosphonooxymethyl)oxan-4-yl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 46I "Create component" 2023-07-12 PDBE 46I "Initial release" 2024-02-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 46I _pdbx_chem_comp_synonyms.name "[(2S,3R,4R,5R,6R)-3-oxidanyl-2,5-diphosphonooxy-6-(phosphonooxymethyl)oxan-4-yl] dihydrogen phosphate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #