data_46Z # _chem_comp.id 46Z _chem_comp.name "(2R,3R,4S,5S)-4-fluoro-3,5-dihydroxytetrahydrofuran-2-yl 2-phenylethyl hydrogen (S)-phosphate" _chem_comp.type "D-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C12 H16 F O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Inhibitor CZ-46 based on arabinosyl-2-fluoro-2-deoxynicotinamide mononucleotide, bound form" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-05-12 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 322.223 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 46Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3ROQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 46Z _pdbx_chem_comp_synonyms.name "Inhibitor CZ-46 based on arabinosyl-2-fluoro-2-deoxynicotinamide mononucleotide, bound form" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 46Z O1 O1 O 0 1 N Y N -401.012 -929.541 -0.959 -5.365 2.044 0.634 O1 46Z 1 46Z P P P 0 1 N N N -398.037 -933.544 1.994 -0.170 -0.075 0.553 P 46Z 2 46Z C1 C1 C 0 1 N N S -399.578 -929.341 -0.280 -4.678 1.250 -0.336 C1 46Z 3 46Z C2 C2 C 0 1 N N S -398.234 -929.246 -1.021 -5.162 -0.213 -0.252 C2 46Z 4 46Z F2 F2 F 0 1 N N N -397.343 -928.322 -0.510 -6.083 -0.492 -1.268 F2 46Z 5 46Z C3 C3 C 0 1 N N R -397.641 -930.629 -0.878 -3.846 -1.009 -0.465 C3 46Z 6 46Z O3 O3 O 0 1 N N N -397.743 -931.151 -2.212 -3.903 -2.282 0.181 O3 46Z 7 46Z C4 C4 C 0 1 N N R -398.506 -931.384 0.182 -2.822 -0.076 0.230 C4 46Z 8 46Z O4 O4 O 0 1 N N N -399.407 -930.375 0.713 -3.272 1.257 -0.062 O4 46Z 9 46Z O5 O5 O 0 1 N N N -397.821 -931.972 1.398 -1.515 -0.287 -0.307 O5 46Z 10 46Z CAE CAE C 0 1 Y N N -400.196 -936.544 7.575 7.429 0.343 0.211 CAE 46Z 11 46Z CAF CAF C 0 1 Y N N -399.244 -937.219 6.808 6.859 -0.910 0.342 CAF 46Z 12 46Z CAG CAG C 0 1 Y N N -400.196 -935.147 7.630 6.702 1.379 -0.345 CAG 46Z 13 46Z CAH CAH C 0 1 Y N N -398.287 -936.494 6.091 5.562 -1.127 -0.086 CAH 46Z 14 46Z CAI CAI C 0 1 Y N N -399.238 -934.422 6.913 5.408 1.160 -0.777 CAI 46Z 15 46Z CAJ CAJ C 0 1 N N N -397.727 -933.088 4.598 2.453 -0.049 0.041 CAJ 46Z 16 46Z CAK CAK C 0 1 N N N -397.208 -934.317 5.345 3.422 -0.328 -1.109 CAK 46Z 17 46Z CAP CAP C 0 1 Y N N -398.281 -935.090 6.138 4.836 -0.091 -0.643 CAP 46Z 18 46Z OP1 OP1 O 0 1 N N N -398.983 -934.379 1.239 -0.157 1.292 1.120 OP1 46Z 19 46Z OP2 OP2 O 0 1 N N N -396.571 -934.188 2.070 -0.122 -1.153 1.748 OP2 46Z 20 46Z OP3 OP3 O 0 1 N N N -398.573 -933.490 3.536 1.112 -0.273 -0.401 OP3 46Z 21 46Z HO1 HO1 H 0 1 N Y N -401.681 -929.568 -0.285 -5.101 2.975 0.638 HO1 46Z 22 46Z H1 H1 H 0 1 N N N -399.666 -928.396 0.276 -4.862 1.645 -1.335 H1 46Z 23 46Z H2 H2 H 0 1 N N N -398.433 -929.051 -2.085 -5.589 -0.425 0.728 H2 46Z 24 46Z H3 H3 H 0 1 N N N -396.596 -930.571 -0.539 -3.621 -1.119 -1.526 H3 46Z 25 46Z HO3 HO3 H 0 1 N N N -397.392 -932.033 -2.235 -4.604 -2.860 -0.150 HO3 46Z 26 46Z H4 H4 H 0 1 N N N -399.079 -932.172 -0.328 -2.823 -0.248 1.306 H4 46Z 27 46Z HAE HAE H 0 1 N N N -400.936 -937.104 8.128 8.441 0.513 0.548 HAE 46Z 28 46Z HAF HAF H 0 1 N N N -399.247 -938.298 6.769 7.427 -1.719 0.776 HAF 46Z 29 46Z HAG HAG H 0 1 N N N -400.934 -934.629 8.225 7.146 2.358 -0.442 HAG 46Z 30 46Z HAH HAH H 0 1 N N N -397.550 -937.016 5.499 5.117 -2.105 0.016 HAH 46Z 31 46Z HAI HAI H 0 1 N N N -399.236 -933.343 6.957 4.840 1.969 -1.213 HAI 46Z 32 46Z HAJ HAJ H 0 1 N N N -396.876 -932.522 4.192 2.677 -0.715 0.875 HAJ 46Z 33 46Z HAJA HAJA H 0 0 N N N -398.293 -932.451 5.293 2.560 0.987 0.364 HAJA 46Z 34 46Z HAK HAK H 0 1 N N N -396.765 -935.004 4.609 3.315 -1.363 -1.432 HAK 46Z 35 46Z HAKA HAKA H 0 0 N N N -396.432 -933.986 6.051 3.198 0.338 -1.942 HAKA 46Z 36 46Z HOP2 HOP2 H 0 0 N N N -396.564 -935.016 1.605 -0.128 -2.072 1.449 HOP2 46Z 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 46Z O1 C1 SING N N 1 46Z O1 HO1 SING N N 2 46Z OP1 P DOUB N N 3 46Z O5 P SING N N 4 46Z P OP2 SING N N 5 46Z P OP3 SING N N 6 46Z C2 C1 SING N N 7 46Z C1 O4 SING N N 8 46Z C1 H1 SING N N 9 46Z C2 C3 SING N N 10 46Z C2 F2 SING N N 11 46Z C2 H2 SING N N 12 46Z O3 C3 SING N N 13 46Z C3 C4 SING N N 14 46Z C3 H3 SING N N 15 46Z O3 HO3 SING N N 16 46Z C4 O4 SING N N 17 46Z C4 O5 SING N N 18 46Z C4 H4 SING N N 19 46Z CAF CAE DOUB Y N 20 46Z CAE CAG SING Y N 21 46Z CAE HAE SING N N 22 46Z CAH CAF SING Y N 23 46Z CAF HAF SING N N 24 46Z CAI CAG DOUB Y N 25 46Z CAG HAG SING N N 26 46Z CAH CAP DOUB Y N 27 46Z CAH HAH SING N N 28 46Z CAP CAI SING Y N 29 46Z CAI HAI SING N N 30 46Z OP3 CAJ SING N N 31 46Z CAJ CAK SING N N 32 46Z CAJ HAJ SING N N 33 46Z CAJ HAJA SING N N 34 46Z CAK CAP SING N N 35 46Z CAK HAK SING N N 36 46Z CAK HAKA SING N N 37 46Z OP2 HOP2 SING N N 38 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 46Z SMILES ACDLabs 12.01 "O=P(O)(OC1OC(O)C(F)C1O)OCCc2ccccc2" 46Z InChI InChI 1.03 "InChI=1S/C12H16FO7P/c13-9-10(14)12(19-11(9)15)20-21(16,17)18-7-6-8-4-2-1-3-5-8/h1-5,9-12,14-15H,6-7H2,(H,16,17)/t9-,10-,11-,12+/m0/s1" 46Z InChIKey InChI 1.03 SMTSAPKONQAWEG-FIQHERPVSA-N 46Z SMILES_CANONICAL CACTVS 3.370 "O[C@H]1O[C@H](O[P](O)(=O)OCCc2ccccc2)[C@@H](O)[C@@H]1F" 46Z SMILES CACTVS 3.370 "O[CH]1O[CH](O[P](O)(=O)OCCc2ccccc2)[CH](O)[CH]1F" 46Z SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CCO[P@](=O)(O)O[C@@H]2[C@H]([C@@H]([C@H](O2)O)F)O" 46Z SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CCOP(=O)(O)OC2C(C(C(O2)O)F)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 46Z "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,3R,4S,5S)-4-fluoro-3,5-dihydroxytetrahydrofuran-2-yl 2-phenylethyl hydrogen (S)-phosphate" 46Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4S,5S)-4-fluoranyl-3,5-bis(oxidanyl)oxolan-2-yl] 2-phenylethyl hydrogen phosphate" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 46Z "CARBOHYDRATE ISOMER" D PDB ? 46Z "CARBOHYDRATE RING" furanose PDB ? 46Z "CARBOHYDRATE ANOMER" alpha PDB ? 46Z "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 46Z "Create component" 2011-05-12 PDBJ 46Z "Modify aromatic_flag" 2011-06-04 RCSB 46Z "Modify descriptor" 2011-06-04 RCSB 46Z "Other modification" 2013-01-08 RCSB 46Z "Other modification" 2020-07-03 RCSB 46Z "Modify linking type" 2020-07-17 RCSB ##