data_472 # _chem_comp.id 472 _chem_comp.name "(5S)-2-amino-3-methyl-5-pyridin-4-yl-5-(3-pyridin-3-ylphenyl)-3,5-dihydro-4H-imidazol-4-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H17 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-08-17 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 343.382 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 472 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3IN3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 472 C1 C1 C 0 1 N N N 15.972 -4.325 17.675 3.005 2.375 2.453 C1 472 1 472 N1 N1 N 0 1 N N N 15.402 -5.495 17.042 2.598 1.613 1.270 N1 472 2 472 O1 O1 O 0 1 N N N 14.344 -6.344 18.889 0.846 0.416 2.155 O1 472 3 472 C2 C2 C 0 1 N N N 14.642 -6.405 17.705 1.579 0.728 1.240 C2 472 4 472 N2 N2 N 0 1 N N N 14.910 -6.979 15.430 2.651 0.924 -0.845 N2 472 5 472 C3 C3 C 0 1 N N S 14.219 -7.483 16.671 1.550 0.207 -0.183 C3 472 6 472 N3 N3 N 0 1 N N N 16.324 -5.243 14.880 4.260 2.531 -0.232 N3 472 7 472 C4 C4 C 0 1 N N N 15.510 -5.879 15.754 3.194 1.706 0.037 C4 472 8 472 N4 N4 N 0 1 Y N N 15.707 -11.517 17.418 2.253 -3.974 -0.236 N4 472 9 472 C5 C5 C 0 1 Y N N 14.743 -8.899 16.968 1.799 -1.279 -0.202 C5 472 10 472 N5 N5 N 0 1 Y N N 9.980 -3.048 13.952 -4.576 -0.646 1.744 N5 472 11 472 C6 C6 C 0 1 Y N N 15.012 -9.776 15.902 2.759 -1.827 -1.040 C6 472 12 472 C7 C7 C 0 1 Y N N 15.485 -11.051 16.170 2.960 -3.194 -1.030 C7 472 13 472 C8 C8 C 0 1 Y N N 15.448 -10.670 18.434 1.333 -3.488 0.574 C8 472 14 472 C9 C9 C 0 1 Y N N 14.972 -9.373 18.266 1.076 -2.131 0.618 C9 472 15 472 C10 C10 C 0 1 Y N N 12.679 -7.441 16.563 0.235 0.532 -0.844 C10 472 16 472 C11 C11 C 0 1 Y N N 11.860 -8.539 16.883 0.219 1.124 -2.094 C11 472 17 472 C12 C12 C 0 1 Y N N 10.471 -8.445 16.769 -0.984 1.426 -2.706 C12 472 18 472 C13 C13 C 0 1 Y N N 9.869 -7.260 16.337 -2.176 1.137 -2.072 C13 472 19 472 C14 C14 C 0 1 Y N N 10.653 -6.145 16.010 -2.165 0.541 -0.813 C14 472 20 472 C15 C15 C 0 1 Y N N 12.048 -6.261 16.132 -0.950 0.234 -0.203 C15 472 21 472 C16 C16 C 0 1 Y N N 10.061 -4.876 15.563 -3.443 0.229 -0.126 C16 472 22 472 C17 C17 C 0 1 Y N N 9.030 -4.253 16.282 -4.666 0.528 -0.731 C17 472 23 472 C18 C18 C 0 1 Y N N 8.483 -3.049 15.841 -5.830 0.216 -0.049 C18 472 24 472 C19 C19 C 0 1 Y N N 8.986 -2.486 14.679 -5.746 -0.375 1.198 C19 472 25 472 C20 C20 C 0 1 Y N N 10.491 -4.221 14.410 -3.442 -0.368 1.133 C20 472 26 472 H1 H1 H 0 1 N N N 15.691 -4.309 18.738 3.754 1.810 3.008 H1 472 27 472 H1A H1A H 0 1 N N N 17.068 -4.357 17.586 3.428 3.330 2.142 H1A 472 28 472 H1B H1B H 0 1 N N N 15.590 -3.419 17.182 2.138 2.551 3.089 H1B 472 29 472 HN3 HN3 H 0 1 N N N 16.470 -5.622 13.966 4.647 2.549 -1.121 HN3 472 30 472 HN3A HN3A H 0 0 N N N 16.779 -4.394 15.148 4.626 3.095 0.468 HN3A 472 31 472 H6 H6 H 0 1 N N N 14.851 -9.458 14.882 3.341 -1.193 -1.692 H6 472 32 472 H7 H7 H 0 1 N N N 15.687 -11.707 15.336 3.705 -3.629 -1.679 H7 472 33 472 H8 H8 H 0 1 N N N 15.621 -11.020 19.441 0.773 -4.158 1.210 H8 472 34 472 H9 H9 H 0 1 N N N 14.782 -8.743 19.122 0.321 -1.738 1.284 H9 472 35 472 H11 H11 H 0 1 N N N 12.309 -9.462 17.219 1.148 1.352 -2.594 H11 472 36 472 H12 H12 H 0 1 N N N 9.856 -9.297 17.017 -0.992 1.888 -3.682 H12 472 37 472 H13 H13 H 0 1 N N N 8.794 -7.203 16.255 -3.115 1.374 -2.550 H13 472 38 472 H15 H15 H 0 1 N N N 12.661 -5.407 15.884 -0.936 -0.228 0.773 H15 472 39 472 H17 H17 H 0 1 N N N 8.656 -4.711 17.186 -4.703 0.991 -1.706 H17 472 40 472 H18 H18 H 0 1 N N N 7.688 -2.567 16.391 -6.793 0.433 -0.486 H18 472 41 472 H19 H19 H 0 1 N N N 8.564 -1.553 14.336 -6.651 -0.620 1.732 H19 472 42 472 H20 H20 H 0 1 N N N 11.287 -4.678 13.840 -2.504 -0.605 1.613 H20 472 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 472 N1 C1 SING N N 1 472 C1 H1 SING N N 2 472 C1 H1A SING N N 3 472 C1 H1B SING N N 4 472 C4 N1 SING N N 5 472 N1 C2 SING N N 6 472 C2 O1 DOUB N N 7 472 C3 C2 SING N N 8 472 N2 C4 DOUB N N 9 472 N2 C3 SING N N 10 472 C10 C3 SING N N 11 472 C3 C5 SING N N 12 472 N3 C4 SING N N 13 472 N3 HN3 SING N N 14 472 N3 HN3A SING N N 15 472 C7 N4 DOUB Y N 16 472 N4 C8 SING Y N 17 472 C6 C5 DOUB Y N 18 472 C5 C9 SING Y N 19 472 N5 C20 DOUB Y N 20 472 N5 C19 SING Y N 21 472 C6 C7 SING Y N 22 472 C6 H6 SING N N 23 472 C7 H7 SING N N 24 472 C9 C8 DOUB Y N 25 472 C8 H8 SING N N 26 472 C9 H9 SING N N 27 472 C15 C10 DOUB Y N 28 472 C10 C11 SING Y N 29 472 C12 C11 DOUB Y N 30 472 C11 H11 SING N N 31 472 C13 C12 SING Y N 32 472 C12 H12 SING N N 33 472 C14 C13 DOUB Y N 34 472 C13 H13 SING N N 35 472 C16 C14 SING Y N 36 472 C14 C15 SING Y N 37 472 C15 H15 SING N N 38 472 C20 C16 SING Y N 39 472 C16 C17 DOUB Y N 40 472 C18 C17 SING Y N 41 472 C17 H17 SING N N 42 472 C19 C18 DOUB Y N 43 472 C18 H18 SING N N 44 472 C19 H19 SING N N 45 472 C20 H20 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 472 SMILES ACDLabs 11.02 "O=C2N(C(=NC2(c1ccncc1)c4cccc(c3cccnc3)c4)N)C" 472 SMILES_CANONICAL CACTVS 3.352 "CN1C(=N[C@](c2ccncc2)(c3cccc(c3)c4cccnc4)C1=O)N" 472 SMILES CACTVS 3.352 "CN1C(=N[C](c2ccncc2)(c3cccc(c3)c4cccnc4)C1=O)N" 472 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CN1C(=O)[C@@](N=C1N)(c2ccncc2)c3cccc(c3)c4cccnc4" 472 SMILES "OpenEye OEToolkits" 1.7.0 "CN1C(=O)C(N=C1N)(c2ccncc2)c3cccc(c3)c4cccnc4" 472 InChI InChI 1.03 "InChI=1S/C20H17N5O/c1-25-18(26)20(24-19(25)21,16-7-10-22-11-8-16)17-6-2-4-14(12-17)15-5-3-9-23-13-15/h2-13H,1H3,(H2,21,24)/t20-/m1/s1" 472 InChIKey InChI 1.03 AIKOTXHNUIYVMD-HXUWFJFHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 472 "SYSTEMATIC NAME" ACDLabs 11.02 "(5S)-2-amino-3-methyl-5-(pyridin-4-yl)-5-[3-(pyridin-3-yl)phenyl]-3,5-dihydro-4H-imidazol-4-one" 472 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(5S)-2-azanyl-3-methyl-5-pyridin-4-yl-5-(3-pyridin-3-ylphenyl)imidazol-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 472 "Create component" 2009-08-17 RCSB 472 "Modify aromatic_flag" 2011-06-04 RCSB 472 "Modify descriptor" 2011-06-04 RCSB #