data_4BW # _chem_comp.id 4BW _chem_comp.name "2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H24 N10 O13 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;3',3' cGAMP; c-GMP-AMP; c[G(3',5')pA(3',5')p] ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-02-25 _chem_comp.pdbx_modified_date 2020-05-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 674.411 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4BW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4YAZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4BW OAC O1 O 0 1 N N N 77.231 -23.289 81.075 9.602 1.177 2.545 OAC 4BW 1 4BW CBC C1 C 0 1 N N N 78.352 -22.749 80.368 9.014 0.561 1.673 CBC 4BW 2 4BW NAT N1 N 0 1 N N N 78.173 -22.094 79.198 9.596 -0.490 1.054 NAT 4BW 3 4BW CBA C2 C 0 1 N N N 79.215 -21.590 78.541 8.927 -1.175 0.084 CBA 4BW 4 4BW NAA N2 N 0 1 N N N 78.962 -20.890 77.272 9.544 -2.238 -0.526 NAA 4BW 5 4BW NAS N3 N 0 1 N N N 80.461 -21.678 78.977 7.709 -0.847 -0.283 NAS 4BW 6 4BW CBG C3 C 0 1 Y N N 80.715 -22.325 80.165 7.069 0.182 0.285 CBG 4BW 7 4BW CBE C4 C 0 1 Y N N 79.663 -22.889 80.904 7.702 0.925 1.286 CBE 4BW 8 4BW NAR N4 N 0 1 Y N N 80.208 -23.450 82.018 6.836 1.890 1.680 NAR 4BW 9 4BW CAL C5 C 0 1 Y N N 81.546 -23.260 81.968 5.737 1.789 0.992 CAL 4BW 10 4BW NBQ N5 N 0 1 Y N N 81.871 -22.582 80.875 5.833 0.745 0.118 NBQ 4BW 11 4BW CBO C6 C 0 1 N N R 83.188 -22.204 80.477 4.802 0.309 -0.827 CBO 4BW 12 4BW CBI C7 C 0 1 N N R 83.337 -20.867 80.402 3.977 -0.829 -0.206 CBI 4BW 13 4BW OAG O2 O 0 1 N N N 84.179 -20.480 79.324 4.202 -2.049 -0.915 OAG 4BW 14 4BW OAX O3 O 0 1 N N N 84.211 -22.689 81.527 3.919 1.395 -1.113 OAX 4BW 15 4BW CBK C8 C 0 1 N N R 84.801 -21.374 82.185 2.571 0.920 -1.163 CBK 4BW 16 4BW CAN C9 C 0 1 N N N 84.762 -21.530 83.693 1.631 1.957 -0.545 CAN 4BW 17 4BW OAV O4 O 0 1 N N N 83.409 -21.420 84.153 0.317 1.405 -0.440 OAV 4BW 18 4BW PBR P1 P 0 1 N N N 83.155 -21.085 85.726 -1.019 2.303 -0.485 PBR 4BW 19 4BW "O3'" O5 O 0 1 N N N 83.326 -19.565 86.112 -2.211 1.459 -1.163 "O3'" 4BW 20 4BW OAH O6 O 0 1 N N N 83.833 -22.001 86.726 -0.743 3.631 -1.351 OAH 4BW 21 4BW OAD O7 O 0 1 N N N 81.674 -21.340 85.869 -1.404 2.683 0.892 OAD 4BW 22 4BW CBM C10 C 0 1 N N S 83.992 -20.405 81.826 2.510 -0.385 -0.354 CBM 4BW 23 4BW OAZ O8 O 0 1 N N N 84.734 -19.160 81.663 1.759 -1.373 -1.061 OAZ 4BW 24 4BW PBS P2 P 0 1 N N N 83.916 -17.783 81.540 0.537 -2.187 -0.400 PBS 4BW 25 4BW OAI O9 O 0 1 N N N 82.915 -17.743 80.395 0.851 -2.483 1.016 OAI 4BW 26 4BW OAE O10 O 0 1 N N N 84.945 -16.744 81.184 0.315 -3.566 -1.200 OAE 4BW 27 4BW "O5'" O11 O 0 1 N N N 83.299 -17.308 82.946 -0.804 -1.300 -0.478 "O5'" 4BW 28 4BW "C5'" C11 C 0 1 N N N 84.084 -17.534 84.147 -2.106 -1.868 -0.640 "C5'" 4BW 29 4BW "C4'" C12 C 0 1 N N R 83.160 -17.453 85.298 -3.042 -0.828 -1.258 "C4'" 4BW 30 4BW "O4'" O12 O 0 1 N N N 81.987 -16.340 84.993 -4.392 -1.296 -1.204 "O4'" 4BW 31 4BW "C3'" C13 C 0 1 N N S 82.527 -18.578 85.363 -2.972 0.480 -0.454 "C3'" 4BW 32 4BW "C2'" C14 C 0 1 N N R 81.170 -18.252 86.004 -4.436 0.936 -0.311 "C2'" 4BW 33 4BW "O2'" O13 O 0 1 N N N 81.280 -18.254 87.329 -4.652 2.148 -1.037 "O2'" 4BW 34 4BW "C1'" C15 C 0 1 N N R 80.887 -16.798 85.494 -5.269 -0.205 -0.916 "C1'" 4BW 35 4BW N9 N6 N 0 1 Y N N 79.825 -16.731 84.517 -6.292 -0.631 0.041 N9 4BW 36 4BW C8 C16 C 0 1 Y N N 79.955 -16.289 83.267 -6.189 -1.664 0.926 C8 4BW 37 4BW N7 N7 N 0 1 Y N N 78.752 -16.346 82.647 -7.281 -1.759 1.627 N7 4BW 38 4BW C5 C17 C 0 1 Y N N 77.822 -16.829 83.518 -8.152 -0.797 1.239 C5 4BW 39 4BW C4 C18 C 0 1 Y N N 78.514 -17.074 84.726 -7.528 -0.061 0.217 C4 4BW 40 4BW N3 N8 N 0 1 Y N N 77.816 -17.574 85.775 -8.179 0.955 -0.338 N3 4BW 41 4BW C2 C19 C 0 1 Y N N 76.522 -17.834 85.717 -9.395 1.269 0.059 C2 4BW 42 4BW N1 N9 N 0 1 Y N N 75.824 -17.619 84.585 -10.024 0.605 1.011 N1 4BW 43 4BW C6 C20 C 0 1 Y N N 76.434 -17.129 83.491 -9.449 -0.422 1.628 C6 4BW 44 4BW N6 N10 N 0 1 N N N 75.669 -16.898 82.276 -10.114 -1.109 2.629 N6 4BW 45 4BW H1 H1 H 0 1 N N N 77.252 -21.988 78.824 10.495 -0.758 1.302 H1 4BW 46 4BW H2 H2 H 0 1 N N N 79.723 -20.494 76.759 9.081 -2.735 -1.218 H2 4BW 47 4BW H3 H3 H 0 1 N N N 78.029 -20.811 76.922 10.443 -2.492 -0.266 H3 4BW 48 4BW H4 H4 H 0 1 N N N 82.248 -23.610 82.710 4.876 2.432 1.099 H4 4BW 49 4BW H5 H5 H 0 1 N N N 83.434 -22.679 79.516 5.270 -0.038 -1.748 H5 4BW 50 4BW H6 H6 H 0 1 N N N 82.362 -20.365 80.314 4.232 -0.951 0.847 H6 4BW 51 4BW H7 H7 H 0 1 N N N 84.257 -19.533 79.307 5.120 -2.353 -0.895 H7 4BW 52 4BW H8 H8 H 0 1 N N N 85.837 -21.230 81.844 2.285 0.729 -2.196 H8 4BW 53 4BW H9 H9 H 0 1 N N N 85.164 -22.516 83.970 1.991 2.229 0.447 H9 4BW 54 4BW H10 H10 H 0 1 N N N 85.372 -20.742 84.158 1.603 2.845 -1.178 H10 4BW 55 4BW H11 H11 H 0 1 N N N 83.175 -22.504 87.192 -0.035 4.190 -1.000 H11 4BW 56 4BW H12 H12 H 0 1 N N N 83.170 -20.261 82.542 2.070 -0.203 0.626 H12 4BW 57 4BW H13 H13 H 0 1 N N N 84.713 -16.339 80.357 -0.407 -4.109 -0.856 H13 4BW 58 4BW H14 H14 H 0 1 N N N 84.552 -18.529 84.109 -2.044 -2.737 -1.295 H14 4BW 59 4BW H15 H15 H 0 1 N N N 84.865 -16.765 84.236 -2.493 -2.173 0.333 H15 4BW 60 4BW H16 H16 H 0 1 N N N 83.691 -17.172 86.219 -2.758 -0.642 -2.293 H16 4BW 61 4BW H17 H17 H 0 1 N N N 82.332 -18.981 84.358 -2.536 0.297 0.528 H17 4BW 62 4BW H18 H18 H 0 1 N N N 80.397 -18.937 85.626 -4.689 1.074 0.740 H18 4BW 63 4BW H19 H19 H 0 1 N N N 80.437 -18.052 87.717 -5.558 2.483 -0.982 H19 4BW 64 4BW H20 H20 H 0 1 N N N 80.587 -16.206 86.371 -5.746 0.136 -1.835 H20 4BW 65 4BW H21 H21 H 0 1 N N N 80.874 -15.940 82.819 -5.328 -2.308 1.029 H21 4BW 66 4BW H22 H22 H 0 1 N N N 76.017 -18.224 86.588 -9.897 2.102 -0.413 H22 4BW 67 4BW H23 H23 H 0 1 N N N 74.715 -17.155 82.428 -9.685 -1.859 3.070 H23 4BW 68 4BW H24 H24 H 0 1 N N N 75.718 -15.930 82.030 -11.009 -0.841 2.889 H24 4BW 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4BW NAA CBA SING N N 1 4BW CBA NAS DOUB N N 2 4BW CBA NAT SING N N 3 4BW NAS CBG SING N N 4 4BW NAT CBC SING N N 5 4BW OAG CBI SING N N 6 4BW CBG NBQ SING Y N 7 4BW CBG CBE DOUB Y N 8 4BW CBC CBE SING N N 9 4BW CBC OAC DOUB N N 10 4BW OAI PBS DOUB N N 11 4BW CBI CBO SING N N 12 4BW CBI CBM SING N N 13 4BW CBO NBQ SING N N 14 4BW CBO OAX SING N N 15 4BW NBQ CAL SING Y N 16 4BW CBE NAR SING Y N 17 4BW OAE PBS SING N N 18 4BW OAX CBK SING N N 19 4BW PBS OAZ SING N N 20 4BW PBS "O5'" SING N N 21 4BW OAZ CBM SING N N 22 4BW CBM CBK SING N N 23 4BW CAL NAR DOUB Y N 24 4BW CBK CAN SING N N 25 4BW N6 C6 SING N N 26 4BW N7 C8 DOUB Y N 27 4BW N7 C5 SING Y N 28 4BW "O5'" "C5'" SING N N 29 4BW C8 N9 SING Y N 30 4BW C6 C5 DOUB Y N 31 4BW C6 N1 SING Y N 32 4BW C5 C4 SING Y N 33 4BW CAN OAV SING N N 34 4BW "C5'" "C4'" SING N N 35 4BW OAV PBR SING N N 36 4BW N9 C4 SING Y N 37 4BW N9 "C1'" SING N N 38 4BW N1 C2 DOUB Y N 39 4BW C4 N3 DOUB Y N 40 4BW "O4'" "C4'" SING N N 41 4BW "O4'" "C1'" SING N N 42 4BW "C4'" "C3'" SING N N 43 4BW "C3'" "C2'" SING N N 44 4BW "C3'" "O3'" SING N N 45 4BW "C1'" "C2'" SING N N 46 4BW C2 N3 SING Y N 47 4BW PBR OAD DOUB N N 48 4BW PBR "O3'" SING N N 49 4BW PBR OAH SING N N 50 4BW "C2'" "O2'" SING N N 51 4BW NAT H1 SING N N 52 4BW NAA H2 SING N N 53 4BW NAA H3 SING N N 54 4BW CAL H4 SING N N 55 4BW CBO H5 SING N N 56 4BW CBI H6 SING N N 57 4BW OAG H7 SING N N 58 4BW CBK H8 SING N N 59 4BW CAN H9 SING N N 60 4BW CAN H10 SING N N 61 4BW OAH H11 SING N N 62 4BW CBM H12 SING N N 63 4BW OAE H13 SING N N 64 4BW "C5'" H14 SING N N 65 4BW "C5'" H15 SING N N 66 4BW "C4'" H16 SING N N 67 4BW "C3'" H17 SING N N 68 4BW "C2'" H18 SING N N 69 4BW "O2'" H19 SING N N 70 4BW "C1'" H20 SING N N 71 4BW C8 H21 SING N N 72 4BW C2 H22 SING N N 73 4BW N6 H23 SING N N 74 4BW N6 H24 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4BW SMILES ACDLabs 12.01 "O=C7NC(=Nc1c7ncn1C6OC5COP(=O)(O)OC4C(OC(n2c3ncnc(N)c3nc2)C4O)COP(=O)(OC5C6O)O)N" 4BW InChI InChI 1.03 "InChI=1S/C20H24N10O13P2/c21-14-8-15(24-3-23-14)29(4-25-8)18-10(31)12-6(40-18)1-38-45(36,37)43-13-7(2-39-44(34,35)42-12)41-19(11(13)32)30-5-26-9-16(30)27-20(22)28-17(9)33/h3-7,10-13,18-19,31-32H,1-2H2,(H,34,35)(H,36,37)(H2,21,23,24)(H3,22,27,28,33)/t6-,7-,10-,11-,12-,13-,18-,19-/m1/s1" 4BW InChIKey InChI 1.03 RFCBNSCSPXMEBK-INFSMZHSSA-N 4BW SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P](O)(=O)O[C@H]4[C@H]3O)n6cnc7c(N)ncnc67" 4BW SMILES CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]4[CH]3O)n6cnc7c(N)ncnc67" 4BW SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(O[C@@H]5[C@@H](COP(=O)(O4)O)O[C@H]([C@@H]5O)n6cnc7c6N=C(NC7=O)N)O)O)N" 4BW SMILES "OpenEye OEToolkits" 1.9.2 "c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(COP(=O)(O4)O)OC(C5O)n6cnc7c6N=C(NC7=O)N)O)O)N" # _pdbx_chem_comp_identifier.comp_id 4BW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4BW "Create component" 2015-02-25 RCSB 4BW "Initial release" 2015-04-15 RCSB 4BW "Modify synonyms" 2015-07-16 RCSB 4BW "Modify synonyms" 2020-05-26 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 4BW ;3',3' cGAMP ; ? ? 2 4BW c-GMP-AMP ? ? 3 4BW "c[G(3',5')pA(3',5')p]" ? ? #