data_4JK # _chem_comp.id 4JK _chem_comp.name "(S)-2-AMINO-5-(2-HYDROXYACETIMIDAMIDO)PENTANOIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H15 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-02-02 _chem_comp.pdbx_modified_date 2015-04-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 189.212 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4JK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5AGN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4JK CH CH C 0 1 N N N 11.044 0.225 60.234 4.657 -0.596 0.410 CH 4JK 1 4JK CZ CZ C 0 1 N N N 11.601 -0.540 59.048 3.410 0.121 -0.039 CZ 4JK 2 4JK NH NH N 0 1 N N N 11.018 -1.659 58.597 3.503 1.208 -0.733 NH 4JK 3 4JK NE NE N 0 1 N N N 12.674 -0.017 58.476 2.177 -0.380 0.289 NE 4JK 4 4JK CD CD C 0 1 N N N 13.540 0.715 59.090 0.964 0.317 -0.147 CD 4JK 5 4JK CG CG C 0 1 N N N 14.842 1.029 58.353 -0.267 -0.444 0.347 CG 4JK 6 4JK CB CB C 0 1 N N N 15.775 -0.176 58.530 -1.534 0.283 -0.108 CB 4JK 7 4JK CA CA C 0 1 N N S 16.874 -0.230 57.469 -2.765 -0.479 0.386 CA 4JK 8 4JK C C C 0 1 N N N 17.700 -1.477 57.751 -4.009 0.301 0.044 C 4JK 9 4JK OA2 OA2 O 0 1 N N N 17.786 -2.353 56.866 -4.668 -0.007 -0.920 OA2 4JK 10 4JK OA1 OA1 O 0 1 N N N 18.255 -1.642 58.869 -4.383 1.337 0.811 OA1 4JK 11 4JK N N N 0 1 N N N 16.364 -0.224 56.097 -2.819 -1.796 -0.262 N 4JK 12 4JK OH OH O 0 1 N N N 10.055 -0.578 60.840 5.807 0.115 -0.052 OH 4JK 13 4JK HH1C HH1C H 0 0 N N N 11.848 0.435 60.954 4.675 -0.647 1.498 HH1C 4JK 14 4JK HH2C HH2C H 0 0 N N N 10.600 1.172 59.893 4.665 -1.605 -0.002 HH2C 4JK 15 4JK HH HH H 0 1 N N N 9.689 -0.120 61.588 6.648 -0.290 0.201 HH 4JK 16 4JK HA HA H 0 1 N N N 11.489 -2.031 57.797 2.700 1.669 -1.022 HA 4JK 17 4JK HD1 HD1 H 0 1 N N N 13.054 1.673 59.326 0.957 1.326 0.264 HD1 4JK 18 4JK HD2 HD2 H 0 1 N N N 13.806 0.199 60.024 0.947 0.369 -1.236 HD2 4JK 19 4JK HNE HNE H 0 1 N N N 12.823 -0.202 57.504 2.107 -1.195 0.810 HNE 4JK 20 4JK HG1C HG1C H 0 0 N N N 14.639 1.193 57.284 -0.260 -1.454 -0.065 HG1C 4JK 21 4JK HG2C HG2C H 0 0 N N N 15.307 1.930 58.780 -0.249 -0.496 1.436 HG2C 4JK 22 4JK HB1C HB1C H 0 0 N N N 16.246 -0.114 59.522 -1.541 1.292 0.303 HB1C 4JK 23 4JK HB2C HB2C H 0 0 N N N 15.177 -1.097 58.465 -1.551 0.335 -1.197 HB2C 4JK 24 4JK HB HB H 0 1 N N N 17.523 0.647 57.609 -2.703 -0.608 1.467 HB 4JK 25 4JK HN1 HN1 H 0 1 N N N 17.130 -0.261 55.456 -2.877 -1.703 -1.265 HN1 4JK 26 4JK HN2 HN2 H 0 1 N N N 15.774 -1.019 55.957 -2.027 -2.362 0.004 HN2 4JK 27 4JK HA1 HA1 H 0 1 N N N 18.699 -2.482 58.882 -5.188 1.807 0.552 HA1 4JK 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4JK CH CZ SING N N 1 4JK CH OH SING N N 2 4JK CZ NH DOUB N N 3 4JK CZ NE SING N N 4 4JK NE CD SING N N 5 4JK CD CG SING N N 6 4JK CG CB SING N N 7 4JK CB CA SING N N 8 4JK CA C SING N N 9 4JK CA N SING N N 10 4JK C OA2 DOUB N N 11 4JK C OA1 SING N N 12 4JK CH HH1C SING N N 13 4JK CH HH2C SING N N 14 4JK OH HH SING N N 15 4JK NH HA SING N N 16 4JK CD HD1 SING N N 17 4JK CD HD2 SING N N 18 4JK CG HG1C SING N N 19 4JK CG HG2C SING N N 20 4JK CB HB1C SING N N 21 4JK CB HB2C SING N N 22 4JK CA HB SING N N 23 4JK N HN1 SING N N 24 4JK N HN2 SING N N 25 4JK OA1 HA1 SING N N 26 4JK NE HNE SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4JK SMILES ACDLabs 12.01 "O=C(O)C(N)CCCNC(=[N@H])CO" 4JK InChI InChI 1.03 "InChI=1S/C7H15N3O3/c8-5(7(12)13)2-1-3-10-6(9)4-11/h5,11H,1-4,8H2,(H2,9,10)(H,12,13)/t5-/m0/s1" 4JK InChIKey InChI 1.03 TXBVSXZGQDGYCU-YFKPBYRVSA-N 4JK SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCCNC(=N)CO)C(O)=O" 4JK SMILES CACTVS 3.385 "N[CH](CCCNC(=N)CO)C(O)=O" 4JK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(\CO)/NCCC[C@@H](C(=O)O)N" 4JK SMILES "OpenEye OEToolkits" 1.7.6 "C(CC(C(=O)O)N)CNC(=N)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4JK "SYSTEMATIC NAME" ACDLabs 12.01 "N~5~-[(1E)-2-hydroxyethanimidoyl]-L-ornithine" 4JK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-azanyl-5-(2-oxidanylethanimidoylamino)pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4JK "Create component" 2015-02-02 EBI 4JK "Initial release" 2015-04-29 RCSB #