data_4KY # _chem_comp.id 4KY _chem_comp.name "(4R)-1-acetyl-4-(oct-7-en-1-yloxy)-L-proline" _chem_comp.type "peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C15 H25 N O4" _chem_comp.mon_nstd_parent_comp_id PRO _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-04-01 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 283.363 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4KY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code UNDEFINED _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4KY C13 C9 C 0 1 N N N N N N 1.942 3.716 -11.891 -8.272 0.461 0.081 C13 4KY 1 4KY C14 C10 C 0 1 N N N N N N 0.626 4.475 -11.924 -6.949 0.321 0.789 C14 4KY 2 4KY C15 C11 C 0 1 N N N N N N -0.231 4.300 -10.677 -5.837 0.124 -0.244 C15 4KY 3 4KY C16 C12 C 0 1 N N N N N N -0.827 2.912 -10.491 -4.493 -0.018 0.475 C16 4KY 4 4KY C17 C13 C 0 1 N N N N N N -1.745 2.799 -9.274 -3.381 -0.215 -0.558 C17 4KY 5 4KY C18 C14 C 0 1 N N N N N N -2.542 1.497 -9.161 -2.038 -0.357 0.160 C18 4KY 6 4KY C19 C15 C 0 1 N N N N N N -3.528 1.225 -10.274 -0.926 -0.554 -0.872 C19 4KY 7 4KY C C27 C 0 1 N N N Y N Y -4.789 3.514 -14.719 4.793 -0.967 0.398 C 4KY 8 4KY O O6 O 0 1 N N N Y N Y -5.634 2.656 -14.978 5.509 -0.352 -0.356 O 4KY 9 4KY CA C42 C 0 1 N N S Y N N -4.811 4.280 -13.397 3.315 -0.674 0.439 CA 4KY 10 4KY CB C43 C 0 1 N N N N N N -3.932 3.550 -12.376 2.549 -1.721 -0.398 CB 4KY 11 4KY CG C44 C 0 1 N N R N N N -4.928 2.629 -11.684 1.440 -0.877 -1.079 CG 4KY 12 4KY CD C45 C 0 1 N N N N N N -6.168 3.503 -11.521 2.180 0.460 -1.335 CD 4KY 13 4KY N N8 N 0 1 N N N Y Y N -6.117 4.348 -12.724 3.049 0.642 -0.159 N 4KY 14 4KY C43 C46 C 0 1 N N N N N N -7.159 5.065 -13.177 3.521 1.821 0.295 C43 4KY 15 4KY O6 O7 O 0 1 N N N N N N -8.185 5.193 -12.482 4.231 1.852 1.277 O6 4KY 16 4KY C44 C47 C 0 1 N N N N N N -6.980 5.774 -14.465 3.166 3.099 -0.419 C44 4KY 17 4KY O5 O8 O 0 1 N N N N N N -4.450 2.314 -10.373 0.329 -0.687 -0.201 O5 4KY 18 4KY C12 C48 C 0 1 N N N N N N 2.744 3.884 -13.174 -9.268 -0.331 0.393 C12 4KY 19 4KY H24 H12 H 0 1 N N N N N N 2.272 3.123 -11.051 -8.400 1.217 -0.679 H24 4KY 20 4KY H26 H14 H 0 1 N N N N N N 0.849 5.546 -12.041 -6.750 1.222 1.369 H26 4KY 21 4KY H27 H15 H 0 1 N N N N N N 0.048 4.124 -12.791 -6.982 -0.540 1.455 H27 4KY 22 4KY H29 H16 H 0 1 N N N N N N 0.395 4.522 -9.800 -6.036 -0.777 -0.824 H29 4KY 23 4KY H28 H17 H 0 1 N N N N N N -1.059 5.022 -10.729 -5.803 0.986 -0.911 H28 4KY 24 4KY H31 H18 H 0 1 N N N N N N -1.409 2.660 -11.390 -4.295 0.883 1.055 H31 4KY 25 4KY H30 H19 H 0 1 N N N N N N -0.003 2.193 -10.373 -4.527 -0.879 1.141 H30 4KY 26 4KY H32 H20 H 0 1 N N N N N N -1.123 2.894 -8.372 -3.580 -1.116 -1.138 H32 4KY 27 4KY H33 H21 H 0 1 N N N N N N -2.462 3.632 -9.314 -3.348 0.646 -1.225 H33 4KY 28 4KY H34 H22 H 0 1 N N N N N N -1.824 0.664 -9.136 -1.839 0.544 0.741 H34 4KY 29 4KY H35 H23 H 0 1 N N N N N N -3.102 1.526 -8.215 -2.072 -1.219 0.827 H35 4KY 30 4KY H36 H24 H 0 1 N N N N N N -2.986 1.116 -11.225 -1.125 -1.455 -1.452 H36 4KY 31 4KY H37 H25 H 0 1 N N N N N N -4.078 0.298 -10.057 -0.892 0.307 -1.539 H37 4KY 32 4KY HA H66 H 0 1 N N N Y N N -4.415 5.294 -13.557 2.963 -0.692 1.470 HA 4KY 33 4KY HB3 H67 H 0 1 N N N N N N -3.138 2.974 -12.874 3.204 -2.172 -1.144 HB3 4KY 34 4KY HB2 H68 H 0 1 N N N N N N -3.481 4.256 -11.663 2.112 -2.484 0.245 HB2 4KY 35 4KY HG2 H69 H 0 1 N N N N N N -5.141 1.736 -12.290 1.122 -1.333 -2.016 HG2 4KY 36 4KY HD3 H70 H 0 1 N N N N N N -7.084 2.895 -11.500 2.779 0.394 -2.243 HD3 4KY 37 4KY HD2 H71 H 0 1 N N N N N N -6.110 4.110 -10.605 1.466 1.281 -1.410 HD2 4KY 38 4KY H73 H72 H 0 1 N N N N N N -7.867 6.391 -14.671 2.250 3.510 0.005 H73 4KY 39 4KY H71 H73 H 0 1 N N N N N N -6.091 6.419 -14.408 3.976 3.819 -0.301 H71 4KY 40 4KY H72 H74 H 0 1 N N N N N N -6.849 5.039 -15.273 3.015 2.894 -1.479 H72 4KY 41 4KY H22 H75 H 0 1 N N N N N N 3.701 3.395 -13.280 -9.141 -1.084 1.156 H22 4KY 42 4KY H23 H76 H 0 1 N N N N N N 2.356 4.492 -13.978 -10.216 -0.231 -0.115 H23 4KY 43 4KY OXT OXT O 0 1 N Y N Y N Y -3.803 3.850 -15.556 5.313 -1.911 1.198 OXT 4KY 44 4KY HXT HXT H 0 1 N Y N Y N Y -3.870 3.331 -16.349 6.266 -2.062 1.135 HXT 4KY 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4KY C13 C12 DOUB N N 1 4KY C13 C14 SING N N 2 4KY C14 C15 SING N N 3 4KY C15 C16 SING N N 4 4KY C16 C17 SING N N 5 4KY C17 C18 SING N N 6 4KY C18 C19 SING N N 7 4KY C19 O5 SING N N 8 4KY C O DOUB N N 9 4KY C CA SING N N 10 4KY CA N SING N N 11 4KY CA CB SING N N 12 4KY CB CG SING N N 13 4KY CG CD SING N N 14 4KY CG O5 SING N N 15 4KY CD N SING N N 16 4KY N C43 SING N N 17 4KY C43 C44 SING N N 18 4KY C43 O6 DOUB N N 19 4KY C13 H24 SING N N 20 4KY C14 H26 SING N N 21 4KY C14 H27 SING N N 22 4KY C15 H29 SING N N 23 4KY C15 H28 SING N N 24 4KY C16 H31 SING N N 25 4KY C16 H30 SING N N 26 4KY C17 H32 SING N N 27 4KY C17 H33 SING N N 28 4KY C18 H34 SING N N 29 4KY C18 H35 SING N N 30 4KY C19 H36 SING N N 31 4KY C19 H37 SING N N 32 4KY CA HA SING N N 33 4KY CB HB3 SING N N 34 4KY CB HB2 SING N N 35 4KY CG HG2 SING N N 36 4KY CD HD3 SING N N 37 4KY CD HD2 SING N N 38 4KY C44 H73 SING N N 39 4KY C44 H71 SING N N 40 4KY C44 H72 SING N N 41 4KY C12 H22 SING N N 42 4KY C12 H23 SING N N 43 4KY C OXT SING N N 44 4KY OXT HXT SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4KY SMILES ACDLabs 12.01 "C(=C)\CCCCCCOC1CC(C(=O)O)N(C1)C(C)=O" 4KY InChI InChI 1.03 "InChI=1S/C15H25NO4/c1-3-4-5-6-7-8-9-20-13-10-14(15(18)19)16(11-13)12(2)17/h3,13-14H,1,4-11H2,2H3,(H,18,19)/t13-,14+/m1/s1" 4KY InChIKey InChI 1.03 AGAQQODVIZZKQQ-KGLIPLIRSA-N 4KY SMILES_CANONICAL CACTVS 3.385 "CC(=O)N1C[C@@H](C[C@H]1C(O)=O)OCCCCCCC=C" 4KY SMILES CACTVS 3.385 "CC(=O)N1C[CH](C[CH]1C(O)=O)OCCCCCCC=C" 4KY SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(=O)N1C[C@@H](C[C@H]1C(=O)O)OCCCCCCC=C" 4KY SMILES "OpenEye OEToolkits" 1.9.2 "CC(=O)N1CC(CC1C(=O)O)OCCCCCCC=C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4KY "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-1-acetyl-4-(oct-7-en-1-yloxy)-L-proline" 4KY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S,4R)-1-ethanoyl-4-oct-7-enoxy-pyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4KY "Create component" 2015-04-01 ? 4KY "Initial release" 2015-07-29 RCSB 4KY "Modify backbone" 2023-11-03 PDBE 4KY "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 4KY _pdbx_chem_comp_pcm.modified_residue_id PRO _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position N-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #