data_4L4 # _chem_comp.id 4L4 _chem_comp.name "Hygromycin A" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H29 N O12" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-04-06 _chem_comp.pdbx_modified_date 2015-05-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 511.476 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4L4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4Z3R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4L4 CAA C1 C 0 1 N N N 81.836 -55.619 -5.354 8.719 -3.135 -0.644 CAA 4L4 1 4L4 CAU C2 C 0 1 N N N 81.541 -56.343 -6.671 7.450 -2.408 -0.282 CAU 4L4 2 4L4 OAC O1 O 0 1 N N N 80.502 -56.151 -7.299 6.557 -2.997 0.280 OAC 4L4 3 4L4 CBG C3 C 0 1 N N S 82.608 -57.345 -7.129 7.294 -0.948 -0.619 CBG 4L4 4 4L4 OAT O2 O 0 1 N N N 83.931 -56.814 -6.891 5.917 -0.538 -0.478 OAT 4L4 5 4L4 CBB C4 C 0 1 N N S 82.537 -58.569 -6.251 8.042 -0.066 0.413 CBB 4L4 6 4L4 OAG O3 O 0 1 N N N 81.575 -59.507 -6.766 9.413 0.096 0.047 OAG 4L4 7 4L4 CBA C5 C 0 1 N N S 83.935 -59.071 -6.427 7.278 1.276 0.307 CBA 4L4 8 4L4 OAF O4 O 0 1 N N N 84.216 -60.086 -5.451 7.094 1.851 1.602 OAF 4L4 9 4L4 CBF C6 C 0 1 N N S 84.657 -57.776 -6.089 5.920 0.890 -0.310 CBF 4L4 10 4L4 OAS O5 O 0 1 N N N 84.496 -57.468 -4.694 4.860 1.278 0.566 OAS 4L4 11 4L4 CAZ C7 C 0 1 Y N N 85.046 -56.243 -4.378 3.591 1.086 0.122 CAZ 4L4 12 4L4 CAY C8 C 0 1 Y N N 84.888 -55.805 -3.070 2.511 1.443 0.928 CAY 4L4 13 4L4 CAN C9 C 0 1 Y N N 85.411 -54.581 -2.680 1.219 1.249 0.479 CAN 4L4 14 4L4 OAE O6 O 0 1 N N N 84.205 -56.611 -2.209 2.729 1.982 2.157 OAE 4L4 15 4L4 CAM C10 C 0 1 Y N N 85.739 -55.444 -5.282 3.373 0.540 -1.136 CAM 4L4 16 4L4 CAL C11 C 0 1 Y N N 86.266 -54.217 -4.886 2.088 0.343 -1.593 CAL 4L4 17 4L4 CAX C12 C 0 1 Y N N 86.085 -53.765 -3.583 0.999 0.694 -0.787 CAX 4L4 18 4L4 CAK C13 C 0 1 N N N 86.584 -52.567 -3.041 -0.373 0.486 -1.272 CAK 4L4 19 4L4 CAV C14 C 0 1 N N N 86.859 -51.278 -3.838 -1.341 0.099 -0.413 CAV 4L4 20 4L4 CAB C15 C 0 1 N N N 86.605 -51.120 -5.338 -0.987 -0.273 1.003 CAB 4L4 21 4L4 CAW C16 C 0 1 N N N 87.380 -50.094 -3.029 -2.733 0.042 -0.858 CAW 4L4 22 4L4 OAD O7 O 0 1 N N N 87.651 -49.006 -3.537 -3.019 0.343 -2.002 OAD 4L4 23 4L4 NAP N1 N 0 1 N N N 87.515 -50.386 -1.736 -3.699 -0.344 -0.001 NAP 4L4 24 4L4 CBH C17 C 0 1 N N R 87.984 -49.487 -0.690 -5.094 -0.401 -0.446 CBH 4L4 25 4L4 CBE C18 C 0 1 N N S 86.902 -48.471 -0.407 -5.865 -1.400 0.412 CBE 4L4 26 4L4 OAJ O8 O 0 1 N N N 86.733 -47.614 -1.542 -5.237 -2.680 0.322 OAJ 4L4 27 4L4 CBJ C19 C 0 1 N N R 87.312 -47.629 0.772 -7.317 -1.517 -0.060 CBJ 4L4 28 4L4 OAR O9 O 0 1 N N N 86.201 -46.827 1.187 -8.047 -2.148 1.026 OAR 4L4 29 4L4 CAO C20 C 0 1 N N N 85.577 -47.619 2.213 -8.552 -1.092 1.857 CAO 4L4 30 4L4 OAQ O10 O 0 1 N N N 86.135 -48.920 2.043 -8.185 0.174 1.273 OAQ 4L4 31 4L4 CBI C21 C 0 1 N N S 87.468 -48.485 1.997 -7.987 -0.132 -0.117 CBI 4L4 32 4L4 CBD C22 C 0 1 N N S 88.431 -49.633 1.787 -7.165 0.905 -0.841 CBD 4L4 33 4L4 OAI O11 O 0 1 N N N 88.263 -50.564 2.867 -7.790 2.182 -0.694 OAI 4L4 34 4L4 CBC C23 C 0 1 N N R 88.153 -50.385 0.516 -5.742 0.979 -0.289 CBC 4L4 35 4L4 OAH O12 O 0 1 N N N 89.265 -51.258 0.277 -4.991 1.951 -1.020 OAH 4L4 36 4L4 H1 H1 H 0 1 N N N 80.999 -54.950 -5.107 8.621 -3.563 -1.641 H1 4L4 37 4L4 H2 H2 H 0 1 N N N 81.963 -56.359 -4.550 9.555 -2.434 -0.631 H2 4L4 38 4L4 H3 H3 H 0 1 N N N 82.758 -55.029 -5.459 8.901 -3.931 0.077 H3 4L4 39 4L4 H4 H4 H 0 1 N N N 82.458 -57.611 -8.186 7.653 -0.749 -1.629 H4 4L4 40 4L4 H5 H5 H 0 1 N N N 82.336 -58.297 -5.204 7.956 -0.484 1.416 H5 4L4 41 4L4 H6 H6 H 0 1 N N N 81.543 -60.271 -6.202 9.923 0.640 0.663 H6 4L4 42 4L4 H7 H7 H 0 1 N N N 84.135 -59.394 -7.459 7.811 1.967 -0.346 H7 4L4 43 4L4 H8 H8 H 0 1 N N N 85.105 -60.401 -5.568 6.620 2.694 1.594 H8 4L4 44 4L4 H9 H9 H 0 1 N N N 85.717 -57.834 -6.379 5.800 1.377 -1.278 H9 4L4 45 4L4 H10 H10 H 0 1 N N N 85.293 -54.256 -1.657 0.382 1.525 1.102 H10 4L4 46 4L4 H11 H11 H 0 1 N N N 84.167 -56.201 -1.353 2.794 2.947 2.158 H11 4L4 47 4L4 H12 H12 H 0 1 N N N 85.870 -55.778 -6.301 4.213 0.269 -1.758 H12 4L4 48 4L4 H13 H13 H 0 1 N N N 86.817 -53.615 -5.593 1.922 -0.081 -2.572 H13 4L4 49 4L4 H14 H14 H 0 1 N N N 86.791 -52.549 -1.981 -0.608 0.642 -2.314 H14 4L4 50 4L4 H15 H15 H 0 1 N N N 86.886 -50.104 -5.653 -0.989 0.622 1.626 H15 4L4 51 4L4 H16 H16 H 0 1 N N N 87.208 -51.855 -5.891 -1.719 -0.984 1.386 H16 4L4 52 4L4 H17 H17 H 0 1 N N N 85.538 -51.287 -5.549 0.004 -0.726 1.023 H17 4L4 53 4L4 H18 H18 H 0 1 N N N 87.270 -51.314 -1.456 -3.471 -0.583 0.911 H18 4L4 54 4L4 H19 H19 H 0 1 N N N 88.932 -48.997 -0.959 -5.132 -0.709 -1.491 H19 4L4 55 4L4 H20 H20 H 0 1 N N N 85.962 -48.993 -0.175 -5.852 -1.066 1.449 H20 4L4 56 4L4 H21 H21 H 0 1 N N N 87.049 -48.055 -2.322 -5.672 -3.369 0.842 H21 4L4 57 4L4 H22 H22 H 0 1 N N N 88.217 -47.040 0.562 -7.402 -2.069 -0.996 H22 4L4 58 4L4 H23 H23 H 0 1 N N N 85.814 -47.221 3.211 -9.638 -1.165 1.921 H23 4L4 59 4L4 H24 H24 H 0 1 N N N 84.486 -47.642 2.077 -8.120 -1.173 2.855 H24 4L4 60 4L4 H25 H25 H 0 1 N N N 87.753 -47.883 2.872 -8.956 -0.221 -0.608 H25 4L4 61 4L4 H26 H26 H 0 1 N N N 89.461 -49.247 1.768 -7.121 0.650 -1.900 H26 4L4 62 4L4 H27 H27 H 0 1 N N N 88.431 -50.125 3.693 -7.319 2.903 -1.133 H27 4L4 63 4L4 H28 H28 H 0 1 N N N 87.235 -50.977 0.647 -5.771 1.254 0.766 H28 4L4 64 4L4 H29 H29 H 0 1 N N N 89.386 -51.830 1.026 -5.347 2.848 -0.962 H29 4L4 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4L4 OAC CAU DOUB N N 1 4L4 CBG OAT SING N N 2 4L4 CBG CAU SING N N 3 4L4 CBG CBB SING N N 4 4L4 OAT CBF SING N N 5 4L4 OAG CBB SING N N 6 4L4 CAU CAA SING N N 7 4L4 CBA CBB SING N N 8 4L4 CBA CBF SING N N 9 4L4 CBA OAF SING N N 10 4L4 CBF OAS SING N N 11 4L4 CAB CAV SING N N 12 4L4 CAM CAL DOUB Y N 13 4L4 CAM CAZ SING Y N 14 4L4 CAL CAX SING Y N 15 4L4 OAS CAZ SING N N 16 4L4 CAZ CAY DOUB Y N 17 4L4 CAV CAK DOUB N E 18 4L4 CAV CAW SING N N 19 4L4 CAX CAK SING N N 20 4L4 CAX CAN DOUB Y N 21 4L4 OAD CAW DOUB N N 22 4L4 CAY CAN SING Y N 23 4L4 CAY OAE SING N N 24 4L4 CAW NAP SING N N 25 4L4 NAP CBH SING N N 26 4L4 OAJ CBE SING N N 27 4L4 CBH CBE SING N N 28 4L4 CBH CBC SING N N 29 4L4 CBE CBJ SING N N 30 4L4 OAH CBC SING N N 31 4L4 CBC CBD SING N N 32 4L4 CBJ OAR SING N N 33 4L4 CBJ CBI SING N N 34 4L4 OAR CAO SING N N 35 4L4 CBD CBI SING N N 36 4L4 CBD OAI SING N N 37 4L4 CBI OAQ SING N N 38 4L4 OAQ CAO SING N N 39 4L4 CAA H1 SING N N 40 4L4 CAA H2 SING N N 41 4L4 CAA H3 SING N N 42 4L4 CBG H4 SING N N 43 4L4 CBB H5 SING N N 44 4L4 OAG H6 SING N N 45 4L4 CBA H7 SING N N 46 4L4 OAF H8 SING N N 47 4L4 CBF H9 SING N N 48 4L4 CAN H10 SING N N 49 4L4 OAE H11 SING N N 50 4L4 CAM H12 SING N N 51 4L4 CAL H13 SING N N 52 4L4 CAK H14 SING N N 53 4L4 CAB H15 SING N N 54 4L4 CAB H16 SING N N 55 4L4 CAB H17 SING N N 56 4L4 NAP H18 SING N N 57 4L4 CBH H19 SING N N 58 4L4 CBE H20 SING N N 59 4L4 OAJ H21 SING N N 60 4L4 CBJ H22 SING N N 61 4L4 CAO H23 SING N N 62 4L4 CAO H24 SING N N 63 4L4 CBI H25 SING N N 64 4L4 CBD H26 SING N N 65 4L4 OAI H27 SING N N 66 4L4 CBC H28 SING N N 67 4L4 OAH H29 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4L4 SMILES ACDLabs 12.01 "CC(=O)C1OC(C(C1O)O)Oc2c(cc(cc2)[C@H]=C(C(NC4C(C3OCOC3C(O)C4O)O)=O)C)O" 4L4 InChI InChI 1.03 "InChI=1S/C23H29NO12/c1-8(22(32)24-13-14(27)16(29)21-20(15(13)28)33-7-34-21)5-10-3-4-12(11(26)6-10)35-23-18(31)17(30)19(36-23)9(2)25/h3-6,13-21,23,26-31H,7H2,1-2H3,(H,24,32)/b8-5+/t13-,14-,15+,16+,17+,18+,19-,20-,21+,23-/m1/s1" 4L4 InChIKey InChI 1.03 YQYJSBFKSSDGFO-YYVVTDTASA-N 4L4 SMILES_CANONICAL CACTVS 3.385 "CC(=O)[C@H]1O[C@@H](Oc2ccc(\C=C(/C)C(=O)N[C@@H]3[C@@H](O)[C@H](O)[C@@H]4OCO[C@@H]4[C@H]3O)cc2O)[C@@H](O)[C@@H]1O" 4L4 SMILES CACTVS 3.385 "CC(=O)[CH]1O[CH](Oc2ccc(C=C(C)C(=O)N[CH]3[CH](O)[CH](O)[CH]4OCO[CH]4[CH]3O)cc2O)[CH](O)[CH]1O" 4L4 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C/C(=C\c1ccc(c(c1)O)O[C@H]2[C@H]([C@@H]([C@H](O2)C(=O)C)O)O)/C(=O)N[C@@H]3[C@H]([C@@H]([C@H]4[C@@H]([C@H]3O)OCO4)O)O" 4L4 SMILES "OpenEye OEToolkits" 1.9.2 "CC(=Cc1ccc(c(c1)O)OC2C(C(C(O2)C(=O)C)O)O)C(=O)NC3C(C(C4C(C3O)OCO4)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4L4 "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-3-{4-[(6-deoxy-beta-D-arabino-hexofuranosyl-5-ulose)oxy]-3-hydroxyphenyl}-2-methyl-N-[(3aR,4S,5R,6R,7S,7aS)-4,6,7-trihydroxyhexahydro-1,3-benzodioxol-5-yl]prop-2-enamide" 4L4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(E)-N-[(3aR,4S,5R,6R,7S,7aS)-4,6,7-tris(oxidanyl)-3a,4,5,6,7,7a-hexahydro-1,3-benzodioxol-5-yl]-3-[4-[(2S,3S,4S,5S)-5-ethanoyl-3,4-bis(oxidanyl)oxolan-2-yl]oxy-3-oxidanyl-phenyl]-2-methyl-prop-2-enamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4L4 "Create component" 2015-04-06 RCSB 4L4 "Initial release" 2015-06-03 RCSB #