data_4WQ # _chem_comp.id 4WQ _chem_comp.name "(2S)-2-amino-7,7-dimethyloctanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C10 H21 N O2" _chem_comp.mon_nstd_parent_comp_id ALA _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-06-12 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 187.279 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4WQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5C0M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4WQ N N N 0 1 N N N Y Y N 51.528 18.187 46.346 -2.661 1.806 -0.218 N 4WQ 1 4WQ CA CA C 0 1 N N S Y N N 51.696 19.615 46.089 -2.572 0.368 -0.505 CA 4WQ 2 4WQ CB CB C 0 1 N N N N N N 50.527 20.069 45.219 -1.301 -0.201 0.129 CB 4WQ 3 4WQ CG CG C 0 1 N N N N N N 50.453 21.565 44.948 -0.074 0.422 -0.539 CG 4WQ 4 4WQ CD CD C 0 1 N N N N N N 49.390 21.847 43.882 1.197 -0.147 0.095 CD 4WQ 5 4WQ CE CE C 0 1 N N N N N N 47.990 21.415 44.316 2.424 0.476 -0.573 CE 4WQ 6 4WQ CZ CZ C 0 1 N N N N N N 46.831 21.933 43.471 3.694 -0.094 0.062 CZ 4WQ 7 4WQ CM3 CM3 C 0 1 N N N N N N 46.974 21.497 42.006 4.922 0.530 -0.606 CM3 4WQ 8 4WQ CM2 CM2 C 0 1 N N N N N N 45.527 21.376 44.041 3.707 0.231 1.557 CM2 4WQ 9 4WQ CM1 CM1 C 0 1 N N N N N N 46.803 23.465 43.513 3.725 -1.611 -0.131 CM1 4WQ 10 4WQ C C C 0 1 N N N Y N Y 51.781 20.332 47.421 -3.776 -0.334 0.066 C 4WQ 11 4WQ O O O 0 1 N N N Y N Y 50.992 20.013 48.289 -4.425 0.192 0.939 O 4WQ 12 4WQ H H1 H 0 1 N N N Y Y N 52.282 17.859 46.916 -2.692 1.974 0.777 H1 4WQ 13 4WQ H2 H2 H 0 1 N Y N Y Y N 50.661 18.033 46.820 -1.897 2.308 -0.645 H2 4WQ 14 4WQ HA H4 H 0 1 N N N Y N N 52.632 19.782 45.536 -2.539 0.215 -1.584 H4 4WQ 15 4WQ H5 H5 H 0 1 N N N N N N 49.595 19.769 45.721 -1.292 0.030 1.194 H5 4WQ 16 4WQ H6 H6 H 0 1 N N N N N N 50.605 19.553 44.251 -1.280 -1.283 -0.008 H6 4WQ 17 4WQ H7 H7 H 0 1 N N N N N N 51.431 21.920 44.591 -0.083 0.190 -1.604 H7 4WQ 18 4WQ H8 H8 H 0 1 N N N N N N 50.188 22.092 45.877 -0.095 1.503 -0.402 H8 4WQ 19 4WQ H9 H9 H 0 1 N N N N N N 49.658 21.302 42.965 1.206 0.084 1.161 H9 4WQ 20 4WQ H10 H10 H 0 1 N N N N N N 49.377 22.927 43.676 1.218 -1.229 -0.042 H10 4WQ 21 4WQ H11 H11 H 0 1 N N N N N N 47.836 21.765 45.347 2.414 0.244 -1.638 H11 4WQ 22 4WQ H12 H12 H 0 1 N N N N N N 47.956 20.316 44.293 2.402 1.557 -0.435 H12 4WQ 23 4WQ H13 H13 H 0 1 N N N N N N 46.996 20.399 41.950 4.912 0.298 -1.671 H13 4WQ 24 4WQ H14 H14 H 0 1 N N N N N N 46.120 21.876 41.426 4.900 1.611 -0.469 H14 4WQ 25 4WQ H15 H15 H 0 1 N N N N N N 47.908 21.904 41.592 5.827 0.124 -0.154 H15 4WQ 26 4WQ H16 H16 H 0 1 N N N N N N 45.423 21.687 45.091 4.613 -0.174 2.009 H16 4WQ 27 4WQ H17 H17 H 0 1 N N N N N N 44.678 21.762 43.458 3.686 1.312 1.694 H17 4WQ 28 4WQ H18 H18 H 0 1 N N N N N N 45.542 20.278 43.984 2.833 -0.213 2.033 H18 4WQ 29 4WQ H19 H19 H 0 1 N N N N N N 46.701 23.802 44.555 2.850 -2.055 0.345 H19 4WQ 30 4WQ H20 H20 H 0 1 N N N N N N 47.738 23.860 43.090 3.715 -1.843 -1.196 H20 4WQ 31 4WQ H21 H21 H 0 1 N N N N N N 45.950 23.832 42.924 4.630 -2.017 0.322 H21 4WQ 32 4WQ OXT OXT O 0 1 N Y N Y N Y ? ? ? -4.129 -1.545 -0.395 OXT 4WQ 33 4WQ HXT H3 H 0 1 N Y N Y N Y ? ? ? -4.909 -1.956 0.002 H3 4WQ 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4WQ CM3 CZ SING N N 1 4WQ CZ CM1 SING N N 2 4WQ CZ CM2 SING N N 3 4WQ CZ CE SING N N 4 4WQ CD CE SING N N 5 4WQ CD CG SING N N 6 4WQ CG CB SING N N 7 4WQ CB CA SING N N 8 4WQ CA N SING N N 9 4WQ CA C SING N N 10 4WQ C O DOUB N N 11 4WQ N H SING N N 12 4WQ N H2 SING N N 13 4WQ CA HA SING N N 14 4WQ CB H5 SING N N 15 4WQ CB H6 SING N N 16 4WQ CG H7 SING N N 17 4WQ CG H8 SING N N 18 4WQ CD H9 SING N N 19 4WQ CD H10 SING N N 20 4WQ CE H11 SING N N 21 4WQ CE H12 SING N N 22 4WQ CM3 H13 SING N N 23 4WQ CM3 H14 SING N N 24 4WQ CM3 H15 SING N N 25 4WQ CM2 H16 SING N N 26 4WQ CM2 H17 SING N N 27 4WQ CM2 H18 SING N N 28 4WQ CM1 H19 SING N N 29 4WQ CM1 H20 SING N N 30 4WQ CM1 H21 SING N N 31 4WQ C OXT SING N N 32 4WQ OXT HXT SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4WQ SMILES ACDLabs 12.01 "NC(C(=O)O)CCCCC(C)(C)C" 4WQ InChI InChI 1.03 "InChI=1S/C10H21NO2/c1-10(2,3)7-5-4-6-8(11)9(12)13/h8H,4-7,11H2,1-3H3,(H,12,13)/t8-/m0/s1" 4WQ InChIKey InChI 1.03 LDROFNYSJLCCKR-QMMMGPOBSA-N 4WQ SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)CCCC[C@H](N)C(O)=O" 4WQ SMILES CACTVS 3.385 "CC(C)(C)CCCC[CH](N)C(O)=O" 4WQ SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(C)(C)CCCC[C@@H](C(=O)O)N" 4WQ SMILES "OpenEye OEToolkits" 1.9.2 "CC(C)(C)CCCCC(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4WQ "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-amino-7,7-dimethyloctanoic acid" 4WQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-azanyl-7,7-dimethyl-octanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4WQ "Create component" 2015-06-12 RCSB 4WQ "Initial release" 2015-07-01 RCSB 4WQ "Modify backbone" 2023-11-03 PDBE #