data_4YH # _chem_comp.id 4YH _chem_comp.name "(2S)-2-(3,4-dimethoxyphenyl)-5-{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino}-2-(propan-2-yl)pentanenitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H38 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-06-24 _chem_comp.pdbx_modified_date 2015-09-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 454.602 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4YH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5C6O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4YH C30 C1 C 0 1 N N N 9.639 -19.958 -26.083 -4.937 3.770 0.724 C30 4YH 1 4YH O19 O1 O 0 1 N N N 8.916 -19.543 -24.856 -5.940 3.079 -0.022 O19 4YH 2 4YH C6 C2 C 0 1 Y N N 9.453 -18.416 -24.296 -5.760 1.744 -0.210 C6 4YH 3 4YH C5 C3 C 0 1 Y N N 9.151 -17.140 -24.787 -4.645 1.113 0.317 C5 4YH 4 4YH C9 C4 C 0 1 Y N N 10.309 -18.567 -23.196 -6.698 1.008 -0.928 C9 4YH 5 4YH O23 O2 O 0 1 N N N 10.611 -19.824 -22.721 -7.797 1.622 -1.443 O23 4YH 6 4YH C32 C5 C 0 1 N N N 9.378 -20.654 -22.139 -8.717 0.803 -2.168 C32 4YH 7 4YH C13 C6 C 0 1 Y N N 10.870 -17.430 -22.614 -6.510 -0.352 -1.116 C13 4YH 8 4YH C11 C7 C 0 1 Y N N 10.555 -16.164 -23.124 -5.392 -0.974 -0.592 C11 4YH 9 4YH C2 C8 C 0 1 Y N N 9.697 -15.977 -24.223 -4.463 -0.244 0.125 C2 4YH 10 4YH C1 C9 C 0 1 N N S 9.341 -14.694 -24.777 -3.250 -0.929 0.699 C1 4YH 11 4YH C15 C10 C 0 1 N N N 8.651 -13.757 -23.712 -3.309 -2.424 0.381 C15 4YH 12 4YH C29 C11 C 0 1 N N N 8.439 -12.300 -24.176 -4.585 -3.022 0.978 C29 4YH 13 4YH C28 C12 C 0 1 N N N 9.319 -13.800 -22.319 -3.314 -2.623 -1.136 C28 4YH 14 4YH C3 C13 C 0 1 N N N 8.315 -14.982 -25.766 -3.224 -0.738 2.159 C3 4YH 15 4YH N4 N1 N 0 1 N N N 7.455 -15.194 -26.572 -3.203 -0.591 3.285 N4 4YH 16 4YH C22 C14 C 0 1 N N N 10.504 -14.113 -25.657 -1.985 -0.326 0.084 C22 4YH 17 4YH C26 C15 C 0 1 N N N 11.276 -12.871 -25.158 -0.753 -1.022 0.667 C26 4YH 18 4YH C25 C16 C 0 1 N N N 11.043 -11.657 -26.072 0.511 -0.419 0.051 C25 4YH 19 4YH N8 N2 N 0 1 N N N 11.933 -11.548 -27.248 1.694 -1.087 0.611 N8 4YH 20 4YH C27 C17 C 0 1 N N N 13.027 -12.539 -27.304 1.745 -2.497 0.204 C27 4YH 21 4YH C16 C18 C 0 1 N N N 11.093 -11.595 -28.456 2.926 -0.384 0.228 C16 4YH 22 4YH C21 C19 C 0 1 N N N 10.491 -10.215 -28.786 4.104 -0.950 1.022 C21 4YH 23 4YH C17 C20 C 0 1 Y N N 9.126 -10.298 -29.017 5.368 -0.229 0.629 C17 4YH 24 4YH C12 C21 C 0 1 Y N N 8.637 -10.928 -30.168 6.137 -0.704 -0.417 C12 4YH 25 4YH C18 C22 C 0 1 Y N N 8.257 -9.733 -28.086 5.753 0.910 1.312 C18 4YH 26 4YH C14 C23 C 0 1 Y N N 6.888 -9.805 -28.306 6.911 1.575 0.955 C14 4YH 27 4YH C10 C24 C 0 1 Y N N 6.393 -10.437 -29.449 7.689 1.101 -0.089 C10 4YH 28 4YH O24 O3 O 0 1 N N N 5.052 -10.512 -29.651 8.828 1.755 -0.441 O24 4YH 29 4YH C33 C25 C 0 1 N N N 4.416 -11.004 -28.453 9.164 2.924 0.309 C33 4YH 30 4YH C7 C26 C 0 1 Y N N 7.262 -11.007 -30.397 7.298 -0.042 -0.780 C7 4YH 31 4YH O20 O4 O 0 1 N N N 6.729 -11.621 -31.510 8.056 -0.509 -1.809 O20 4YH 32 4YH C31 C27 C 0 1 N N N 7.630 -11.737 -32.648 7.594 -1.687 -2.472 C31 4YH 33 4YH H1 H1 H 0 1 N N N 9.172 -20.865 -26.495 -5.202 4.825 0.800 H1 4YH 34 4YH H2 H2 H 0 1 N N N 9.591 -19.150 -26.828 -4.867 3.341 1.724 H2 4YH 35 4YH H3 H3 H 0 1 N N N 10.690 -20.167 -25.836 -3.976 3.673 0.219 H3 4YH 36 4YH H4 H4 H 0 1 N N N 8.477 -17.048 -25.626 -3.918 1.681 0.878 H4 4YH 37 4YH H5 H5 H 0 1 N N N 9.729 -21.636 -21.789 -8.208 0.351 -3.019 H5 4YH 38 4YH H6 H6 H 0 1 N N N 8.930 -20.104 -21.298 -9.099 0.019 -1.514 H6 4YH 39 4YH H7 H7 H 0 1 N N N 8.625 -20.794 -22.928 -9.546 1.416 -2.523 H7 4YH 40 4YH H8 H8 H 0 1 N N N 11.543 -17.525 -21.775 -7.236 -0.925 -1.673 H8 4YH 41 4YH H9 H9 H 0 1 N N N 10.989 -15.294 -22.653 -5.246 -2.034 -0.740 H9 4YH 42 4YH H10 H10 H 0 1 N N N 7.643 -14.173 -23.570 -2.440 -2.922 0.810 H10 4YH 43 4YH H11 H11 H 0 1 N N N 7.955 -11.726 -23.373 -5.415 -2.330 0.829 H11 4YH 44 4YH H12 H12 H 0 1 N N N 9.412 -11.846 -24.416 -4.808 -3.968 0.485 H12 4YH 45 4YH H13 H13 H 0 1 N N N 7.799 -12.290 -25.071 -4.442 -3.193 2.045 H13 4YH 46 4YH H14 H14 H 0 1 N N N 8.785 -13.125 -21.635 -2.294 -2.556 -1.514 H14 4YH 47 4YH H15 H15 H 0 1 N N N 9.280 -14.826 -21.925 -3.726 -3.604 -1.372 H15 4YH 48 4YH H16 H16 H 0 1 N N N 10.368 -13.480 -22.405 -3.926 -1.851 -1.602 H16 4YH 49 4YH H17 H17 H 0 1 N N N 10.069 -13.851 -26.633 -2.005 -0.468 -0.997 H17 4YH 50 4YH H18 H18 H 0 1 N N N 11.241 -14.919 -25.789 -1.942 0.739 0.310 H18 4YH 51 4YH H19 H19 H 0 1 N N N 12.351 -13.103 -25.139 -0.734 -0.881 1.747 H19 4YH 52 4YH H20 H20 H 0 1 N N N 10.936 -12.623 -24.142 -0.796 -2.087 0.440 H20 4YH 53 4YH H21 H21 H 0 1 N N N 11.175 -10.749 -25.465 0.492 -0.561 -1.030 H21 4YH 54 4YH H22 H22 H 0 1 N N N 10.007 -11.706 -26.438 0.554 0.646 0.278 H22 4YH 55 4YH H24 H24 H 0 1 N N N 13.630 -12.473 -26.386 1.790 -2.560 -0.884 H24 4YH 56 4YH H25 H25 H 0 1 N N N 12.602 -13.550 -27.391 2.630 -2.967 0.632 H25 4YH 57 4YH H26 H26 H 0 1 N N N 13.664 -12.333 -28.177 0.852 -3.011 0.561 H26 4YH 58 4YH H27 H27 H 0 1 N N N 10.274 -12.311 -28.293 3.107 -0.522 -0.838 H27 4YH 59 4YH H28 H28 H 0 1 N N N 11.708 -11.928 -29.305 2.819 0.679 0.443 H28 4YH 60 4YH H29 H29 H 0 1 N N N 10.982 -9.817 -29.686 3.924 -0.812 2.088 H29 4YH 61 4YH H30 H30 H 0 1 N N N 10.670 -9.535 -27.940 4.211 -2.013 0.807 H30 4YH 62 4YH H31 H31 H 0 1 N N N 9.326 -11.355 -30.882 5.832 -1.592 -0.951 H31 4YH 63 4YH H32 H32 H 0 1 N N N 8.644 -9.245 -27.204 5.148 1.280 2.126 H32 4YH 64 4YH H33 H33 H 0 1 N N N 6.204 -9.371 -27.591 7.210 2.465 1.490 H33 4YH 65 4YH H34 H34 H 0 1 N N N 3.329 -11.066 -28.613 8.364 3.658 0.215 H34 4YH 66 4YH H35 H35 H 0 1 N N N 4.809 -12.003 -28.213 9.291 2.658 1.359 H35 4YH 67 4YH H36 H36 H 0 1 N N N 4.625 -10.318 -27.619 10.093 3.346 -0.073 H36 4YH 68 4YH H37 H37 H 0 1 N N N 7.110 -12.238 -33.478 7.535 -2.507 -1.756 H37 4YH 69 4YH H38 H38 H 0 1 N N N 7.948 -10.734 -32.967 6.607 -1.503 -2.895 H38 4YH 70 4YH H39 H39 H 0 1 N N N 8.512 -12.327 -32.358 8.288 -1.951 -3.270 H39 4YH 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4YH C31 O20 SING N N 1 4YH O20 C7 SING N N 2 4YH C7 C12 DOUB Y N 3 4YH C7 C10 SING Y N 4 4YH C12 C17 SING Y N 5 4YH O24 C10 SING N N 6 4YH O24 C33 SING N N 7 4YH C10 C14 DOUB Y N 8 4YH C17 C21 SING N N 9 4YH C17 C18 DOUB Y N 10 4YH C21 C16 SING N N 11 4YH C16 N8 SING N N 12 4YH C14 C18 SING Y N 13 4YH C27 N8 SING N N 14 4YH N8 C25 SING N N 15 4YH N4 C3 TRIP N N 16 4YH C30 O19 SING N N 17 4YH C25 C26 SING N N 18 4YH C3 C1 SING N N 19 4YH C22 C26 SING N N 20 4YH C22 C1 SING N N 21 4YH O19 C6 SING N N 22 4YH C5 C6 DOUB Y N 23 4YH C5 C2 SING Y N 24 4YH C1 C2 SING N N 25 4YH C1 C15 SING N N 26 4YH C6 C9 SING Y N 27 4YH C2 C11 DOUB Y N 28 4YH C29 C15 SING N N 29 4YH C15 C28 SING N N 30 4YH C9 O23 SING N N 31 4YH C9 C13 DOUB Y N 32 4YH C11 C13 SING Y N 33 4YH O23 C32 SING N N 34 4YH C30 H1 SING N N 35 4YH C30 H2 SING N N 36 4YH C30 H3 SING N N 37 4YH C5 H4 SING N N 38 4YH C32 H5 SING N N 39 4YH C32 H6 SING N N 40 4YH C32 H7 SING N N 41 4YH C13 H8 SING N N 42 4YH C11 H9 SING N N 43 4YH C15 H10 SING N N 44 4YH C29 H11 SING N N 45 4YH C29 H12 SING N N 46 4YH C29 H13 SING N N 47 4YH C28 H14 SING N N 48 4YH C28 H15 SING N N 49 4YH C28 H16 SING N N 50 4YH C22 H17 SING N N 51 4YH C22 H18 SING N N 52 4YH C26 H19 SING N N 53 4YH C26 H20 SING N N 54 4YH C25 H21 SING N N 55 4YH C25 H22 SING N N 56 4YH C27 H24 SING N N 57 4YH C27 H25 SING N N 58 4YH C27 H26 SING N N 59 4YH C16 H27 SING N N 60 4YH C16 H28 SING N N 61 4YH C21 H29 SING N N 62 4YH C21 H30 SING N N 63 4YH C12 H31 SING N N 64 4YH C18 H32 SING N N 65 4YH C14 H33 SING N N 66 4YH C33 H34 SING N N 67 4YH C33 H35 SING N N 68 4YH C33 H36 SING N N 69 4YH C31 H37 SING N N 70 4YH C31 H38 SING N N 71 4YH C31 H39 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4YH SMILES ACDLabs 12.01 "COc1c(OC)ccc(c1)C(C(C)C)(C#N)CCCN(C)CCc2ccc(OC)c(c2)OC" 4YH InChI InChI 1.03 "InChI=1S/C27H38N2O4/c1-20(2)27(19-28,22-10-12-24(31-5)26(18-22)33-7)14-8-15-29(3)16-13-21-9-11-23(30-4)25(17-21)32-6/h9-12,17-18,20H,8,13-16H2,1-7H3/t27-/m0/s1" 4YH InChIKey InChI 1.03 SGTNSNPWRIOYBX-MHZLTWQESA-N 4YH SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CCN(C)CCC[C@](C#N)(C(C)C)c2ccc(OC)c(OC)c2)cc1OC" 4YH SMILES CACTVS 3.385 "COc1ccc(CCN(C)CCC[C](C#N)(C(C)C)c2ccc(OC)c(OC)c2)cc1OC" 4YH SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(C)[C@](CCCN(C)CCc1ccc(c(c1)OC)OC)(C#N)c2ccc(c(c2)OC)OC" 4YH SMILES "OpenEye OEToolkits" 1.9.2 "CC(C)C(CCCN(C)CCc1ccc(c(c1)OC)OC)(C#N)c2ccc(c(c2)OC)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4YH "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-(3,4-dimethoxyphenyl)-5-{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino}-2-(propan-2-yl)pentanenitrile" 4YH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-(3,4-dimethoxyphenyl)-5-[2-(3,4-dimethoxyphenyl)ethyl-methyl-amino]-2-propan-2-yl-pentanenitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4YH "Create component" 2015-06-24 RCSB 4YH "Initial release" 2015-09-23 RCSB #