data_53W # _chem_comp.id 53W _chem_comp.name "5-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[2-(4-methoxyphenyl)ethyl]-1-[2-(morpholin-4-yl)ethyl]-1H-benzimidazole" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H32 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-07-22 _chem_comp.pdbx_modified_date 2016-04-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 460.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 53W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5CFW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 53W C1 C1 C 0 1 Y N N 13.369 -12.753 -7.731 6.720 -0.227 -1.229 C1 53W 1 53W C2 C2 C 0 1 Y N N 14.348 -12.583 -6.701 5.895 -0.638 -0.145 C2 53W 2 53W C4 C3 C 0 1 N N N 15.663 -14.405 -5.365 6.367 -2.141 1.887 C4 53W 3 53W C8 C4 C 0 1 Y N N 15.472 -9.000 -4.776 1.825 0.388 0.592 C8 53W 4 53W C9 C5 C 0 1 Y N N 15.549 -9.067 -6.161 2.170 -0.948 0.323 C9 53W 5 53W C12 C6 C 0 1 N N N 15.946 -7.262 -3.058 -0.370 1.566 1.088 C12 53W 6 53W C13 C7 C 0 1 N N N 17.136 -7.974 -2.409 -0.855 2.200 -0.217 C13 53W 7 53W C10 C8 C 0 1 Y N N 15.210 -10.249 -6.816 3.504 -1.280 0.082 C10 53W 8 53W C11 C9 C 0 1 Y N N 15.974 -7.033 -5.637 0.021 -0.885 0.640 C11 53W 9 53W C14 C10 C 0 1 N N N 17.530 -6.089 -0.855 -2.930 2.978 0.760 C14 53W 10 53W C16 C11 C 0 1 N N N 19.971 -7.110 -1.801 -2.786 5.388 -0.760 C16 53W 11 53W C21 C12 C 0 1 Y N N 19.219 -6.472 -7.329 -4.517 -0.765 -0.180 C21 53W 12 53W C22 C13 C 0 1 Y N N 20.486 -6.945 -7.036 -5.833 -1.168 -0.061 C22 53W 13 53W C23 C14 C 0 1 Y N N 21.102 -6.578 -5.854 -6.166 -2.504 -0.230 C23 53W 14 53W C24 C15 C 0 1 Y N N 20.465 -5.701 -4.989 -5.176 -3.432 -0.518 C24 53W 15 53W C25 C16 C 0 1 Y N N 19.213 -5.205 -5.316 -3.861 -3.024 -0.636 C25 53W 16 53W C26 C17 C 0 1 N N N 23.067 -6.918 -4.503 -7.729 -4.294 -0.299 C26 53W 17 53W O2 O1 O 0 1 N N N 22.331 -7.172 -5.700 -7.460 -2.903 -0.113 O2 53W 18 53W C20 C18 C 0 1 Y N N 18.561 -5.605 -6.475 -3.532 -1.692 -0.467 C20 53W 19 53W C19 C19 C 0 1 N N N 17.164 -5.120 -6.792 -2.097 -1.250 -0.597 C19 53W 20 53W C18 C20 C 0 1 N N N 16.147 -5.556 -5.735 -1.414 -1.327 0.770 C18 53W 21 53W N2 N1 N 0 1 Y N N 15.775 -7.692 -4.450 0.457 0.396 0.785 N2 53W 22 53W N3 N2 N 0 1 N N N 17.658 -7.528 -1.104 -1.684 3.374 0.087 N3 53W 23 53W C17 C21 C 0 1 N N N 19.059 -7.936 -0.927 -1.972 4.146 -1.130 C17 53W 24 53W O1 O2 O 0 1 N N N 19.808 -5.714 -1.572 -3.979 4.986 -0.079 O1 53W 25 53W C15 C22 C 0 1 N N N 18.450 -5.326 -1.765 -3.735 4.232 1.112 C15 53W 26 53W C7 C23 C 0 1 Y N N 15.061 -10.076 -4.009 2.806 1.370 0.613 C7 53W 27 53W C6 C24 C 0 1 Y N N 14.726 -11.242 -4.664 4.120 1.036 0.376 C6 53W 28 53W N1 N3 N 0 1 Y N N 15.876 -7.823 -6.686 1.020 -1.670 0.364 N1 53W 29 53W C5 C25 C 0 1 Y N N 14.785 -11.337 -6.052 4.475 -0.290 0.111 C5 53W 30 53W C3 C26 C 0 1 Y N N 14.760 -13.840 -6.395 6.718 -1.429 0.606 C3 53W 31 53W O O3 O 0 1 Y N N 14.113 -14.725 -7.178 7.901 -1.445 -0.025 O 53W 32 53W N N4 N 0 1 Y N N 13.224 -14.010 -8.028 7.882 -0.778 -1.033 N 53W 33 53W C C27 C 0 1 N N N 12.548 -11.709 -8.414 6.325 0.664 -2.378 C 53W 34 53W H4 H1 H 0 1 N N N 15.645 -15.503 -5.424 5.984 -3.135 1.656 H4 53W 35 53W H5 H2 H 0 1 N N N 16.688 -14.045 -5.539 7.258 -2.231 2.509 H5 53W 36 53W H3 H3 H 0 1 N N N 15.326 -14.086 -4.368 5.606 -1.573 2.421 H3 53W 37 53W H9 H4 H 0 1 N N N 16.120 -6.176 -3.035 0.219 2.292 1.648 H9 53W 38 53W H10 H5 H 0 1 N N N 15.032 -7.499 -2.493 -1.230 1.259 1.684 H10 53W 39 53W H11 H6 H 0 1 N N N 16.844 -9.028 -2.287 0.005 2.508 -0.813 H11 53W 40 53W H12 H7 H 0 1 N N N 17.971 -7.905 -3.122 -1.444 1.474 -0.777 H12 53W 41 53W H8 H8 H 0 1 N N N 15.275 -10.322 -7.892 3.780 -2.304 -0.126 H8 53W 42 53W H14 H9 H 0 1 N N N 17.793 -5.876 0.191 -3.517 2.344 0.095 H14 53W 43 53W H13 H10 H 0 1 N N N 16.492 -5.778 -1.043 -2.693 2.430 1.671 H13 53W 44 53W H17 H11 H 0 1 N N N 19.744 -7.326 -2.855 -2.193 6.030 -0.108 H17 53W 45 53W H18 H12 H 0 1 N N N 21.014 -7.386 -1.587 -3.050 5.934 -1.666 H18 53W 46 53W H25 H13 H 0 1 N N N 18.735 -6.786 -8.242 -4.258 0.276 -0.054 H25 53W 47 53W H26 H14 H 0 1 N N N 20.993 -7.600 -7.729 -6.602 -0.443 0.163 H26 53W 48 53W H27 H15 H 0 1 N N N 20.942 -5.406 -4.066 -5.432 -4.473 -0.649 H27 53W 49 53W H28 H16 H 0 1 N N N 18.736 -4.494 -4.657 -3.090 -3.747 -0.860 H28 53W 50 53W H30 H17 H 0 1 N N N 24.022 -7.464 -4.536 -8.797 -4.476 -0.179 H30 53W 51 53W H29 H18 H 0 1 N N N 23.264 -5.839 -4.416 -7.420 -4.593 -1.301 H29 53W 52 53W H31 H19 H 0 1 N N N 22.482 -7.255 -3.635 -7.176 -4.873 0.440 H31 53W 53 53W H23 H20 H 0 1 N N N 17.173 -4.021 -6.843 -1.578 -1.902 -1.300 H23 53W 54 53W H24 H21 H 0 1 N N N 16.860 -5.529 -7.767 -2.065 -0.223 -0.962 H24 53W 55 53W H22 H22 H 0 1 N N N 16.482 -5.181 -4.757 -1.446 -2.353 1.135 H22 53W 56 53W H21 H23 H 0 1 N N N 15.174 -5.109 -5.986 -1.933 -0.675 1.473 H21 53W 57 53W H20 H25 H 0 1 N N N 19.163 -8.997 -1.198 -2.543 3.530 -1.825 H20 53W 58 53W H19 H26 H 0 1 N N N 19.345 -7.797 0.126 -1.036 4.450 -1.598 H19 53W 59 53W H15 H27 H 0 1 N N N 18.351 -4.251 -1.555 -4.685 3.941 1.560 H15 53W 60 53W H16 H28 H 0 1 N N N 18.166 -5.523 -2.809 -3.170 4.840 1.818 H16 53W 61 53W H7 H29 H 0 1 N N N 15.005 -10.005 -2.933 2.538 2.397 0.815 H7 53W 62 53W H6 H30 H 0 1 N N N 14.411 -12.100 -4.088 4.881 1.803 0.393 H6 53W 63 53W H H31 H 0 1 N N N 11.873 -12.188 -9.139 6.524 1.703 -2.118 H 53W 64 53W H1 H32 H 0 1 N N N 11.954 -11.163 -7.666 6.901 0.393 -3.263 H1 53W 65 53W H2 H33 H 0 1 N N N 13.212 -11.007 -8.940 5.262 0.539 -2.586 H2 53W 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 53W C C1 SING N N 1 53W N C1 DOUB Y N 2 53W N O SING Y N 3 53W C1 C2 SING Y N 4 53W C21 C22 DOUB Y N 5 53W C21 C20 SING Y N 6 53W O C3 SING Y N 7 53W C22 C23 SING Y N 8 53W C10 C9 DOUB Y N 9 53W C10 C5 SING Y N 10 53W C19 C20 SING N N 11 53W C19 C18 SING N N 12 53W C2 C3 DOUB Y N 13 53W C2 C5 SING N N 14 53W N1 C9 SING Y N 15 53W N1 C11 DOUB Y N 16 53W C20 C25 DOUB Y N 17 53W C3 C4 SING N N 18 53W C9 C8 SING Y N 19 53W C5 C6 DOUB Y N 20 53W C23 O2 SING N N 21 53W C23 C24 DOUB Y N 22 53W C18 C11 SING N N 23 53W O2 C26 SING N N 24 53W C11 N2 SING Y N 25 53W C25 C24 SING Y N 26 53W C8 N2 SING Y N 27 53W C8 C7 DOUB Y N 28 53W C6 C7 SING Y N 29 53W N2 C12 SING N N 30 53W C12 C13 SING N N 31 53W C13 N3 SING N N 32 53W C16 O1 SING N N 33 53W C16 C17 SING N N 34 53W C15 O1 SING N N 35 53W C15 C14 SING N N 36 53W N3 C17 SING N N 37 53W N3 C14 SING N N 38 53W C4 H4 SING N N 39 53W C4 H5 SING N N 40 53W C4 H3 SING N N 41 53W C12 H9 SING N N 42 53W C12 H10 SING N N 43 53W C13 H11 SING N N 44 53W C13 H12 SING N N 45 53W C10 H8 SING N N 46 53W C14 H14 SING N N 47 53W C14 H13 SING N N 48 53W C16 H17 SING N N 49 53W C16 H18 SING N N 50 53W C21 H25 SING N N 51 53W C22 H26 SING N N 52 53W C24 H27 SING N N 53 53W C25 H28 SING N N 54 53W C26 H30 SING N N 55 53W C26 H29 SING N N 56 53W C26 H31 SING N N 57 53W C19 H23 SING N N 58 53W C19 H24 SING N N 59 53W C18 H22 SING N N 60 53W C18 H21 SING N N 61 53W C17 H20 SING N N 62 53W C17 H19 SING N N 63 53W C15 H15 SING N N 64 53W C15 H16 SING N N 65 53W C7 H7 SING N N 66 53W C6 H6 SING N N 67 53W C H SING N N 68 53W C H1 SING N N 69 53W C H2 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 53W SMILES ACDLabs 12.01 "c1(c(c(C)on1)c5cc4c(n(CCN2CCOCC2)c(CCc3ccc(OC)cc3)n4)cc5)C" 53W InChI InChI 1.03 "InChI=1S/C27H32N4O3/c1-19-27(20(2)34-29-19)22-7-10-25-24(18-22)28-26(11-6-21-4-8-23(32-3)9-5-21)31(25)13-12-30-14-16-33-17-15-30/h4-5,7-10,18H,6,11-17H2,1-3H3" 53W InChIKey InChI 1.03 RQFUKBAHMUVXDA-UHFFFAOYSA-N 53W SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CCc2nc3cc(ccc3n2CCN4CCOCC4)c5c(C)onc5C)cc1" 53W SMILES CACTVS 3.385 "COc1ccc(CCc2nc3cc(ccc3n2CCN4CCOCC4)c5c(C)onc5C)cc1" 53W SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1c(c(on1)C)c2ccc3c(c2)nc(n3CCN4CCOCC4)CCc5ccc(cc5)OC" 53W SMILES "OpenEye OEToolkits" 1.9.2 "Cc1c(c(on1)C)c2ccc3c(c2)nc(n3CCN4CCOCC4)CCc5ccc(cc5)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 53W "SYSTEMATIC NAME" ACDLabs 12.01 "5-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[2-(4-methoxyphenyl)ethyl]-1-[2-(morpholin-4-yl)ethyl]-1H-benzimidazole" 53W "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "4-[2-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[2-(4-methoxyphenyl)ethyl]benzimidazol-1-yl]ethyl]morpholine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 53W "Create component" 2015-07-22 RCSB 53W "Initial release" 2016-04-20 RCSB #