data_55J # _chem_comp.id 55J _chem_comp.name "1-methyl-5-({2-[5-(trifluoromethyl)-1H-imidazol-2-yl]pyridin-4-yl}oxy)-N-[4-(trifluoromethyl)phenyl]-1H-benzimidazol-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H16 F6 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-07-28 _chem_comp.pdbx_modified_date 2015-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 518.414 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 55J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5CT7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 55J C1 C1 C 0 1 Y N N -19.280 9.437 -8.935 -0.833 -2.512 0.186 C1 55J 1 55J C2 C2 C 0 1 Y N N -19.907 8.738 -9.971 -0.817 -3.356 1.309 C2 55J 2 55J C3 C3 C 0 1 Y N N -19.674 9.025 -11.312 0.162 -4.330 1.432 C3 55J 3 55J O1 O1 O 0 1 N N N -17.140 11.635 -10.927 2.064 -3.785 -1.624 O1 55J 4 55J C11 C4 C 0 1 Y N N -16.323 13.774 -11.466 2.975 -1.687 -0.933 C11 55J 5 55J C12 C5 C 0 1 Y N N -15.402 16.035 -11.922 3.938 0.495 -0.239 C12 55J 6 55J C13 C6 C 0 1 Y N N -20.608 8.032 -7.992 -2.511 -1.935 1.454 C13 55J 7 55J C14 C7 C 0 1 N N N -21.705 6.935 -10.000 -2.287 -3.558 3.377 C14 55J 8 55J C15 C8 C 0 1 Y N N -21.726 7.565 -5.815 -4.252 -0.308 1.117 C15 55J 9 55J C16 C9 C 0 1 Y N N -22.276 6.551 -5.042 -4.984 0.717 1.702 C16 55J 10 55J C17 C10 C 0 1 Y N N -22.736 6.821 -3.765 -5.595 1.668 0.907 C17 55J 11 55J C18 C11 C 0 1 Y N N -22.658 8.099 -3.232 -5.478 1.599 -0.469 C18 55J 12 55J C19 C12 C 0 1 Y N N -22.104 9.109 -4.010 -4.750 0.580 -1.054 C19 55J 13 55J C20 C13 C 0 1 Y N N -21.644 8.851 -5.289 -4.137 -0.374 -0.266 C20 55J 14 55J C21 C14 C 0 1 Y N N -14.330 17.919 -12.342 3.459 1.853 1.373 C21 55J 15 55J C22 C15 C 0 1 Y N N -13.477 16.865 -12.271 4.494 2.400 0.701 C22 55J 16 55J C23 C16 C 0 1 N N N -23.233 8.390 -1.889 -6.147 2.638 -1.332 C23 55J 17 55J C24 C17 C 0 1 N N N -12.012 16.855 -12.450 5.177 3.706 1.016 C24 55J 18 55J C4 C18 C 0 1 Y N N -18.785 10.044 -11.609 1.121 -4.470 0.451 C4 55J 19 55J C5 C19 C 0 1 Y N N -18.134 10.729 -10.581 1.113 -3.638 -0.664 C5 55J 20 55J C6 C20 C 0 1 Y N N -18.367 10.449 -9.236 0.140 -2.667 -0.805 C6 55J 21 55J C7 C21 C 0 1 Y N N -17.408 12.990 -11.106 2.959 -2.779 -1.794 C7 55J 22 55J C8 C22 C 0 1 Y N N -18.652 13.572 -10.922 3.886 -2.816 -2.835 C8 55J 23 55J C9 C23 C 0 1 Y N N -18.754 14.936 -11.121 4.783 -1.776 -2.979 C9 55J 24 55J N1 N1 N 0 1 Y N N -17.724 15.725 -11.474 4.775 -0.753 -2.148 N1 55J 25 55J C10 C24 C 0 1 Y N N -16.526 15.138 -11.628 3.907 -0.674 -1.145 C10 55J 26 55J N2 N2 N 0 1 Y N N -19.744 8.984 -7.695 -1.888 -1.669 0.333 N2 55J 27 55J N3 N3 N 0 1 Y N N -20.762 7.840 -9.345 -1.891 -2.968 2.096 N3 55J 28 55J N4 N4 N 0 1 N N N -21.290 7.244 -7.119 -3.628 -1.269 1.918 N4 55J 29 55J N5 N5 N 0 1 Y N N -15.576 17.424 -12.129 3.140 0.696 0.786 N5 55J 30 55J N6 N6 N 0 1 Y N N -14.125 15.686 -12.008 4.805 1.545 -0.320 N6 55J 31 55J F1 F1 F 0 1 N N N -23.082 9.649 -1.475 -7.299 3.105 -0.692 F1 55J 32 55J F2 F2 F 0 1 N N N -24.510 8.144 -1.853 -5.266 3.704 -1.545 F2 55J 33 55J F3 F3 F 0 1 N N N -22.719 7.659 -0.942 -6.494 2.068 -2.562 F3 55J 34 55J F4 F4 F 0 1 N N N -11.660 16.349 -13.615 6.519 3.636 0.623 F4 55J 35 55J F5 F5 F 0 1 N N N -11.483 18.067 -12.355 4.542 4.743 0.325 F5 55J 36 55J F6 F6 F 0 1 N N N -11.413 16.103 -11.541 5.106 3.949 2.391 F6 55J 37 55J H1 H1 H 0 1 N N N -20.170 8.471 -12.095 0.174 -4.978 2.296 H1 55J 38 55J H2 H2 H 0 1 N N N -15.347 13.336 -11.616 2.272 -1.623 -0.116 H2 55J 39 55J H3 H3 H 0 1 N N N -22.241 6.349 -9.239 -1.782 -3.036 4.190 H3 55J 40 55J H4 H4 H 0 1 N N N -22.428 7.521 -10.587 -3.366 -3.466 3.502 H4 55J 41 55J H5 H5 H 0 1 N N N -21.156 6.254 -10.668 -2.008 -4.612 3.394 H5 55J 42 55J H6 H6 H 0 1 N N N -22.345 5.549 -5.438 -5.076 0.770 2.776 H6 55J 43 55J H7 H7 H 0 1 N N N -23.162 6.024 -3.174 -6.164 2.465 1.362 H7 55J 44 55J H8 H8 H 0 1 N N N -22.032 10.110 -3.610 -4.661 0.529 -2.130 H8 55J 45 55J H9 H9 H 0 1 N N N -21.220 9.649 -5.881 -3.568 -1.170 -0.724 H9 55J 46 55J H10 H10 H 0 1 N N N -14.068 18.950 -12.531 2.972 2.278 2.238 H10 55J 47 55J H11 H11 H 0 1 N N N -18.595 10.310 -12.638 1.883 -5.229 0.549 H11 55J 48 55J H12 H12 H 0 1 N N N -17.860 10.995 -8.455 0.135 -2.026 -1.674 H12 55J 49 55J H13 H13 H 0 1 N N N -19.510 12.982 -10.634 3.902 -3.649 -3.522 H13 55J 50 55J H14 H14 H 0 1 N N N -19.721 15.397 -10.984 5.502 -1.802 -3.784 H14 55J 51 55J H15 H15 H 0 1 N N N -21.510 6.323 -7.440 -3.980 -1.468 2.800 H15 55J 52 55J H17 H17 H 0 1 N N N -13.727 14.774 -11.905 5.507 1.664 -0.978 H17 55J 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 55J F4 C24 SING N N 1 55J C24 F5 SING N N 2 55J C24 C22 SING N N 3 55J C24 F6 SING N N 4 55J C21 C22 DOUB Y N 5 55J C21 N5 SING Y N 6 55J C22 N6 SING Y N 7 55J N5 C12 DOUB Y N 8 55J N6 C12 SING Y N 9 55J C12 C10 SING N N 10 55J C10 N1 DOUB Y N 11 55J C10 C11 SING Y N 12 55J C4 C3 DOUB Y N 13 55J C4 C5 SING Y N 14 55J N1 C9 SING Y N 15 55J C11 C7 DOUB Y N 16 55J C3 C2 SING Y N 17 55J C9 C8 DOUB Y N 18 55J C7 O1 SING N N 19 55J C7 C8 SING Y N 20 55J O1 C5 SING N N 21 55J C5 C6 DOUB Y N 22 55J C14 N3 SING N N 23 55J C2 N3 SING Y N 24 55J C2 C1 DOUB Y N 25 55J N3 C13 SING Y N 26 55J C6 C1 SING Y N 27 55J C1 N2 SING Y N 28 55J C13 N2 DOUB Y N 29 55J C13 N4 SING N N 30 55J N4 C15 SING N N 31 55J C15 C20 DOUB Y N 32 55J C15 C16 SING Y N 33 55J C20 C19 SING Y N 34 55J C16 C17 DOUB Y N 35 55J C19 C18 DOUB Y N 36 55J C17 C18 SING Y N 37 55J C18 C23 SING N N 38 55J C23 F2 SING N N 39 55J C23 F1 SING N N 40 55J C23 F3 SING N N 41 55J C3 H1 SING N N 42 55J C11 H2 SING N N 43 55J C14 H3 SING N N 44 55J C14 H4 SING N N 45 55J C14 H5 SING N N 46 55J C16 H6 SING N N 47 55J C17 H7 SING N N 48 55J C19 H8 SING N N 49 55J C20 H9 SING N N 50 55J C21 H10 SING N N 51 55J C4 H11 SING N N 52 55J C6 H12 SING N N 53 55J C8 H13 SING N N 54 55J C9 H14 SING N N 55 55J N4 H15 SING N N 56 55J N6 H17 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 55J SMILES ACDLabs 12.01 "c25nc(Nc1ccc(cc1)C(F)(F)F)n(c2ccc(Oc4cc(c3ncc(n3)C(F)(F)F)ncc4)c5)C" 55J InChI InChI 1.03 "InChI=1S/C24H16F6N6O/c1-36-19-7-6-15(10-17(19)34-22(36)33-14-4-2-13(3-5-14)23(25,26)27)37-16-8-9-31-18(11-16)21-32-12-20(35-21)24(28,29)30/h2-12H,1H3,(H,32,35)(H,33,34)" 55J InChIKey InChI 1.03 YABJJWZLRMPFSI-UHFFFAOYSA-N 55J SMILES_CANONICAL CACTVS 3.385 "Cn1c(Nc2ccc(cc2)C(F)(F)F)nc3cc(Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F)ccc13" 55J SMILES CACTVS 3.385 "Cn1c(Nc2ccc(cc2)C(F)(F)F)nc3cc(Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F)ccc13" 55J SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cn1c2ccc(cc2nc1Nc3ccc(cc3)C(F)(F)F)Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F" 55J SMILES "OpenEye OEToolkits" 1.9.2 "Cn1c2ccc(cc2nc1Nc3ccc(cc3)C(F)(F)F)Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 55J "SYSTEMATIC NAME" ACDLabs 12.01 "1-methyl-5-({2-[5-(trifluoromethyl)-1H-imidazol-2-yl]pyridin-4-yl}oxy)-N-[4-(trifluoromethyl)phenyl]-1H-benzimidazol-2-amine" 55J "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-methyl-5-[2-[5-(trifluoromethyl)-1H-imidazol-2-yl]pyridin-4-yl]oxy-N-[4-(trifluoromethyl)phenyl]benzimidazol-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 55J "Create component" 2015-07-28 RCSB 55J "Initial release" 2015-09-09 RCSB #