data_59P # _chem_comp.id 59P _chem_comp.name ;3,3'-{[1,1'-biphenyl]-4,4'-diylbis[(E)-diazene-2,1-diyl]}bis(4-aminonaphthalene-1-sulfonic acid) ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H24 N6 O6 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-05-19 _chem_comp.pdbx_modified_date 2026-07-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 652.700 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 59P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2LBU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 59P "O1'" OAA O 0 1 N N N N N N -12.786 -0.040 -18.371 -10.067 2.535 1.354 "O1'" 59P 1 59P C12 CAB C 0 1 Y N N N N N 8.527 -8.684 -16.171 11.861 1.615 0.009 C12 59P 2 59P "O2'" OAC O 0 1 N N N N N N -11.404 1.905 -18.876 -10.899 2.033 -0.794 "O2'" 59P 3 59P "S1'" SAD S 0 1 N N N N N N -11.380 0.433 -18.595 -9.682 2.190 -0.077 "S1'" 59P 4 59P "O3'" OAE O 0 1 N N N N N N -10.825 -0.269 -19.798 -8.671 3.115 -0.455 "O3'" 59P 5 59P "C12'" CAF C 0 0 Y N N N N N -12.471 1.607 -14.538 -11.861 -1.615 -0.011 "C12'" 59P 6 59P "C11'" CAG C 0 0 Y N N N N N -12.034 1.205 -15.795 -11.115 -0.475 -0.030 "C11'" 59P 7 59P "C10'" CAH C 0 0 Y N N N N N -10.835 0.514 -15.928 -9.713 -0.559 -0.024 "C10'" 59P 8 59P "C9'" CAI C 0 1 Y N N N N N -10.405 0.100 -17.183 -8.917 0.603 -0.043 "C9'" 59P 9 59P "C8'" CAJ C 0 1 Y N N N N N -9.204 -0.589 -17.307 -7.565 0.506 -0.036 "C8'" 59P 10 59P "C13'" CAK C 0 0 Y N N N N N -11.701 1.324 -13.414 -11.254 -2.868 0.016 "C13'" 59P 11 59P "C14'" CAL C 0 0 Y N N N N N -10.503 0.633 -13.549 -9.897 -2.988 0.023 "C14'" 59P 12 59P "C15'" CAM C 0 0 Y N N N N N -10.070 0.226 -14.805 -9.097 -1.834 0.003 "C15'" 59P 13 59P "C16'" CAN C 0 0 Y N N N N N -8.871 -0.466 -14.929 -7.688 -1.924 0.010 "C16'" 59P 14 59P "C7'" CAO C 0 1 Y N N N N N -8.428 -0.866 -16.187 -6.930 -0.751 -0.009 "C7'" 59P 15 59P "N2'" NAP N 0 1 N N N N N N -7.223 -1.401 -16.381 -5.571 -0.823 -0.003 "N2'" 59P 16 59P "N1'" NAQ N 0 1 N N N N N N -6.418 -1.554 -15.466 -4.867 0.258 -0.021 "N1'" 59P 17 59P "C4'" CAR C 0 1 Y N N N N N -5.232 -2.107 -15.710 -3.504 0.186 -0.015 "C4'" 59P 18 59P "C5'" CAS C 0 1 Y N N N N N -4.916 -2.533 -16.994 -2.741 1.358 -0.035 "C5'" 59P 19 59P "C6'" CAT C 0 1 Y N N N N N -3.686 -3.127 -17.246 -1.372 1.284 -0.028 "C6'" 59P 20 59P O1 OAU O 0 1 N N N N N N 6.667 -9.724 -19.375 10.066 -2.536 -1.355 O1 59P 21 59P "N3'" NAV N 0 1 N N N N N N -8.256 -0.859 -13.816 -7.066 -3.161 0.036 "N3'" 59P 22 59P "C3'" CAW C 0 1 Y N N N N N -4.319 -2.272 -14.678 -2.869 -1.060 0.017 "C3'" 59P 23 59P "C2'" CAX C 0 1 Y N N N N N -3.086 -2.867 -14.926 -1.500 -1.131 0.024 "C2'" 59P 24 59P "C1'" CAY C 0 1 Y N N N N N -2.772 -3.295 -16.213 -0.739 0.039 -0.002 "C1'" 59P 25 59P C1 CAZ C 0 1 Y N N N N N -1.549 -3.911 -16.464 0.739 -0.039 0.005 C1 59P 26 59P C2 CBA C 0 1 Y N N N N N -0.595 -4.012 -15.455 1.372 -1.284 0.031 C2 59P 27 59P C3 CBB C 0 1 Y N N N N N 0.616 -4.643 -15.708 2.741 -1.358 0.037 C3 59P 28 59P S1 SBC S 0 1 N N N N N N 5.750 -8.547 -19.542 9.682 -2.190 0.076 S1 59P 29 59P N3 NBD N 0 1 N N N N N N 4.696 -6.130 -14.313 7.066 3.161 -0.037 N3 59P 30 59P O2 OBE O 0 1 N N N N N N 6.381 -7.561 -20.478 8.671 -3.115 0.455 O2 59P 31 59P O3 OBF O 0 1 N N N N N N 4.457 -9.034 -20.125 10.899 -2.033 0.792 O3 59P 32 59P C6 CBG C 0 1 Y N N N N N -1.288 -4.436 -17.724 1.500 1.132 -0.021 C6 59P 33 59P C5 CBH C 0 1 Y N N N N N -0.076 -5.068 -17.977 2.869 1.060 -0.015 C5 59P 34 59P C4 CBI C 0 1 Y N N N N N 0.878 -5.170 -16.968 3.504 -0.186 0.017 C4 59P 35 59P N1 NBJ N 0 1 N N N N N N 2.026 -5.799 -17.203 4.867 -0.258 0.023 N1 59P 36 59P N2 NBK N 0 1 N N N N N N 2.858 -5.914 -16.304 5.571 0.823 0.004 N2 59P 37 59P C7 CBL C 0 1 Y N N N N N 4.008 -6.546 -16.528 6.930 0.751 0.010 C7 59P 38 59P C16 CBM C 0 1 Y N N N N N 4.943 -6.664 -15.506 7.688 1.924 -0.010 C16 59P 39 59P C15 CBN C 0 1 Y N N N N N 6.133 -7.347 -15.726 9.097 1.834 -0.004 C15 59P 40 59P C14 CBO C 0 1 Y N N N N N 7.070 -7.449 -14.706 9.896 2.988 -0.024 C14 59P 41 59P C13 CBP C 0 1 Y N N N N N 8.269 -8.116 -14.928 11.254 2.868 -0.018 C13 59P 42 59P C8 CBQ C 0 1 Y N N N N N 4.265 -7.110 -17.773 7.565 -0.506 0.036 C8 59P 43 59P C9 CBR C 0 1 Y N N N N N 5.453 -7.798 -17.990 8.917 -0.603 0.043 C9 59P 44 59P C10 CBS C 0 1 Y N N N N N 6.388 -7.915 -16.968 9.713 0.559 0.023 C10 59P 45 59P C11 CBT C 0 1 Y N N N N N 7.586 -8.583 -17.191 11.115 0.475 0.028 C11 59P 46 59P H12 HAB H 0 1 N N N N N N 9.458 -9.204 -16.345 12.938 1.545 0.009 H12 59P 47 59P "H12'" HAF H 0 0 N N N N N N -13.406 2.138 -14.434 -12.938 -1.545 -0.012 "H12'" 59P 48 59P "H11'" HAG H 0 0 N N N N N N -12.627 1.430 -16.669 -11.599 0.490 -0.051 "H11'" 59P 49 59P "H8'" HAJ H 0 1 N N N N N N -8.871 -0.912 -18.282 -6.966 1.404 -0.051 "H8'" 59P 50 59P "H13'" HAK H 0 0 N N N N N N -12.034 1.641 -12.437 -11.867 -3.756 0.031 "H13'" 59P 51 59P "H14'" HAL H 0 0 N N N N N N -9.907 0.412 -12.676 -9.439 -3.966 0.044 "H14'" 59P 52 59P "H5'" HAS H 0 1 N N N N N N -5.627 -2.402 -17.796 -3.229 2.321 -0.056 "H5'" 59P 53 59P "H6'" HAT H 0 1 N N N N N N -3.440 -3.458 -18.244 -0.782 2.189 -0.043 "H6'" 59P 54 59P "HN1'" HNAV H 0 0 N N N N N N -7.413 -1.341 -14.053 -7.598 -3.972 0.050 "HN1'" 59P 55 59P "HN2'" HNAA H 0 0 N N N N N N -8.037 -0.060 -13.256 -6.097 -3.217 0.040 "HN2'" 59P 56 59P "H3'" HAW H 0 1 N N N N N N -4.566 -1.938 -13.681 -3.457 -1.966 0.037 "H3'" 59P 57 59P "H2'" HAX H 0 1 N N N N N N -2.375 -2.996 -14.123 -1.010 -2.093 0.049 "H2'" 59P 58 59P H2 HBA H 0 1 N N N N N N -0.796 -3.600 -14.477 0.782 -2.189 0.047 H2 59P 59 59P H3 HBB H 0 1 N N N N N N 1.355 -4.725 -14.925 3.229 -2.321 0.057 H3 59P 60 59P HN2 HNBD H 0 1 N N N N N N 5.467 -6.307 -13.702 6.097 3.217 -0.041 HN2 59P 61 59P HN1 HNBA H 0 1 N N N N N N 4.567 -5.143 -14.410 7.598 3.972 -0.051 HN1 59P 62 59P H6 HBG H 0 1 N N N N N N -2.027 -4.353 -18.507 1.010 2.093 -0.046 H6 59P 63 59P H5 HBH H 0 1 N N N N N N 0.125 -5.479 -18.955 3.457 1.966 -0.035 H5 59P 64 59P H14 HBO H 0 1 N N N N N N 6.867 -7.010 -13.740 9.439 3.966 -0.045 H14 59P 65 59P H13 HBP H 0 1 N N N N N N 8.999 -8.193 -14.136 11.867 3.756 -0.033 H13 59P 66 59P H8 HBQ H 0 1 N N N N N N 3.543 -7.014 -18.570 6.966 -1.404 0.052 H8 59P 67 59P H11 HBT H 0 1 N N N N N N 7.787 -9.024 -18.156 11.600 -0.490 0.049 H11 59P 68 59P H1 H1 H 0 1 N Y N N N N -13.016 -0.677 -19.037 -10.499 3.395 1.449 H1 59P 69 59P H4 H4 H 0 1 N Y N N N N 6.229 -10.512 -19.673 10.498 -3.396 -1.450 H4 59P 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 59P "O1'" "S1'" SING N N 1 59P C12 C13 DOUB Y N 2 59P C12 C11 SING Y N 3 59P "O2'" "S1'" DOUB N N 4 59P "S1'" "O3'" DOUB N N 5 59P "S1'" "C9'" SING N N 6 59P "C12'" "C11'" DOUB Y N 7 59P "C12'" "C13'" SING Y N 8 59P "C11'" "C10'" SING Y N 9 59P "C10'" "C9'" DOUB Y N 10 59P "C10'" "C15'" SING Y N 11 59P "C9'" "C8'" SING Y N 12 59P "C8'" "C7'" DOUB Y N 13 59P "C13'" "C14'" DOUB Y N 14 59P "C14'" "C15'" SING Y N 15 59P "C15'" "C16'" DOUB Y N 16 59P "C16'" "C7'" SING Y N 17 59P "C16'" "N3'" SING N N 18 59P "C7'" "N2'" SING N N 19 59P "N2'" "N1'" DOUB N N 20 59P "N1'" "C4'" SING N N 21 59P "C4'" "C5'" DOUB Y N 22 59P "C4'" "C3'" SING Y N 23 59P "C5'" "C6'" SING Y N 24 59P "C6'" "C1'" DOUB Y N 25 59P O1 S1 SING N N 26 59P "C3'" "C2'" DOUB Y N 27 59P "C2'" "C1'" SING Y N 28 59P "C1'" C1 SING N N 29 59P C1 C2 DOUB Y N 30 59P C1 C6 SING Y N 31 59P C2 C3 SING Y N 32 59P C3 C4 DOUB Y N 33 59P S1 O2 DOUB N N 34 59P S1 O3 DOUB N N 35 59P S1 C9 SING N N 36 59P N3 C16 SING N N 37 59P C6 C5 DOUB Y N 38 59P C5 C4 SING Y N 39 59P C4 N1 SING N N 40 59P N1 N2 DOUB N N 41 59P N2 C7 SING N N 42 59P C7 C16 DOUB Y N 43 59P C7 C8 SING Y N 44 59P C16 C15 SING Y N 45 59P C15 C14 DOUB Y N 46 59P C15 C10 SING Y N 47 59P C14 C13 SING Y N 48 59P C8 C9 DOUB Y N 49 59P C9 C10 SING Y N 50 59P C10 C11 DOUB Y N 51 59P C12 H12 SING N N 52 59P "C12'" "H12'" SING N N 53 59P "C11'" "H11'" SING N N 54 59P "C8'" "H8'" SING N N 55 59P "C13'" "H13'" SING N N 56 59P "C14'" "H14'" SING N N 57 59P "C5'" "H5'" SING N N 58 59P "C6'" "H6'" SING N N 59 59P "N3'" "HN1'" SING N N 60 59P "N3'" "HN2'" SING N N 61 59P "C3'" "H3'" SING N N 62 59P "C2'" "H2'" SING N N 63 59P C2 H2 SING N N 64 59P C3 H3 SING N N 65 59P N3 HN2 SING N N 66 59P N3 HN1 SING N N 67 59P C6 H6 SING N N 68 59P C5 H5 SING N N 69 59P C14 H14 SING N N 70 59P C13 H13 SING N N 71 59P C8 H8 SING N N 72 59P C11 H11 SING N N 73 59P "O1'" H1 SING N N 74 59P O1 H4 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 59P SMILES ACDLabs 14.52 "O=S(=O)(O)c1cc(/N=N/c2ccc(cc2)c2ccc(cc2)/N=N/c2cc(c3ccccc3c2N)S(=O)(=O)O)c(N)c2ccccc12" 59P InChI InChI 1.06 "InChI=1S/C32H24N6O6S2/c33-31-25-7-3-1-5-23(25)29(45(39,40)41)17-27(31)37-35-21-13-9-19(10-14-21)20-11-15-22(16-12-20)36-38-28-18-30(46(42,43)44)24-6-2-4-8-26(24)32(28)34/h1-18H,33-34H2,(H,39,40,41)(H,42,43,44)/b37-35+,38-36+" 59P InChIKey InChI 1.06 HFHIDKQMGIGARX-ATXIYDNESA-N 59P SMILES_CANONICAL CACTVS 3.385 "Nc1c(cc(c2ccccc12)[S](O)(=O)=O)N=Nc3ccc(cc3)c4ccc(cc4)N=Nc5cc(c6ccccc6c5N)[S](O)(=O)=O" 59P SMILES CACTVS 3.385 "Nc1c(cc(c2ccccc12)[S](O)(=O)=O)N=Nc3ccc(cc3)c4ccc(cc4)N=Nc5cc(c6ccccc6c5N)[S](O)(=O)=O" 59P SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc(c(c2cc1)N)/N=N/c3ccc(cc3)c4ccc(cc4)/N=N/c5c(c6c(c(c5)S(=O)(=O)O)cccc6)N)S(=O)(=O)O" 59P SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)c(cc(c2N)N=Nc3ccc(cc3)c4ccc(cc4)N=Nc5cc(c6ccccc6c5N)S(=O)(=O)O)S(=O)(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 59P "SYSTEMATIC NAME" ACDLabs 14.52 ;3,3'-{[1,1'-biphenyl]-4,4'-diylbis[(E)-diazene-2,1-diyl]}bis(4-aminonaphthalene-1-sulfonic acid) ; 59P "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-azanyl-3-[(~{E})-[4-[4-[(~{E})-(1-azanyl-4-sulfo-naphthalen-2-yl)diazenyl]phenyl]phenyl]diazenyl]naphthalene-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 59P "Create component" 2026-05-19 RCSB 59P "Initial release" 2026-07-15 RCSB #