data_59R # _chem_comp.id 59R _chem_comp.name "6-{[(3R,4R)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H27 F N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-06-30 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 358.453 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 59R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NNY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 59R C1 C1 C 0 1 N N N 6.993 0.479 24.776 0.139 -2.407 1.363 C1 59R 1 59R O1 O1 O 0 1 N N N 6.733 1.454 25.782 1.034 -1.649 0.547 O1 59R 2 59R C2 C2 C 0 1 N N N 8.450 0.057 24.819 -1.118 -1.582 1.644 C2 59R 3 59R N2 N2 N 0 1 N N N 9.379 1.134 24.544 -1.842 -1.347 0.387 N2 59R 4 59R C3 C3 C 0 1 N N N 10.686 0.766 24.060 -3.057 -0.556 0.619 C3 59R 5 59R C4 C4 C 0 1 N N N 11.717 1.865 24.289 -3.782 -0.333 -0.709 C4 59R 6 59R "N1'" "N1'" N 0 1 N N N 6.663 1.510 28.750 3.408 -2.962 -1.776 "N1'" 59R 7 59R C11 C11 C 0 1 Y N N 12.942 1.513 23.468 -5.029 0.479 -0.471 C11 59R 8 59R C12 C12 C 0 1 Y N N 13.122 2.146 22.242 -6.223 -0.156 -0.186 C12 59R 9 59R C13 C13 C 0 1 Y N N 14.224 1.827 21.473 -7.368 0.590 0.033 C13 59R 10 59R F13 F13 F 0 1 N N N 14.382 2.445 20.289 -8.536 -0.030 0.313 F13 59R 11 59R C14 C14 C 0 1 Y N N 15.161 0.901 21.929 -7.317 1.972 -0.034 C14 59R 12 59R C15 C15 C 0 1 Y N N 14.996 0.260 23.155 -6.122 2.605 -0.320 C15 59R 13 59R C16 C16 C 0 1 Y N N 13.873 0.559 23.918 -4.977 1.859 -0.533 C16 59R 14 59R N1A N1A N 0 1 Y N N 5.373 5.901 26.804 5.074 0.939 0.777 N1A 59R 15 59R "C2'" "C2'" C 0 1 N N N 6.279 0.395 27.903 2.090 -3.102 -1.105 "C2'" 59R 16 59R C2A C2A C 0 1 Y N N 4.527 4.824 26.771 4.012 1.079 0.007 C2A 59R 17 59R "C3'" "C3'" C 0 1 N N R 5.683 1.090 26.680 2.247 -2.332 0.224 "C3'" 59R 18 59R C3A C3A C 0 1 Y N N 3.235 4.932 27.294 3.939 2.100 -0.920 C3A 59R 19 59R "C4'" "C4'" C 0 1 N N R 5.067 2.382 27.217 3.381 -1.319 -0.031 "C4'" 59R 20 59R C4A C4A C 0 1 Y N N 2.842 6.144 27.858 4.999 2.989 -1.037 C4A 59R 21 59R "C5'" "C5'" C 0 1 N N N 5.921 2.730 28.446 3.815 -1.562 -1.493 "C5'" 59R 22 59R C5A C5A C 0 1 Y N N 3.723 7.229 27.886 6.099 2.817 -0.215 C5A 59R 23 59R C6A C6A C 0 1 Y N N 5.006 7.096 27.351 6.105 1.766 0.696 C6A 59R 24 59R N6A N6A N 0 1 N N N 5.854 8.160 27.375 7.203 1.582 1.528 N6A 59R 25 59R C7A C7A C 0 1 N N N 4.984 3.506 26.164 2.865 0.111 0.139 C7A 59R 26 59R H1 H1 H 0 1 N N N 6.769 0.909 23.788 -0.138 -3.324 0.843 H1 59R 27 59R H1A H1A H 0 1 N N N 6.356 -0.401 24.951 0.628 -2.657 2.304 H1A 59R 28 59R H2 H2 H 0 1 N N N 8.664 -0.328 25.827 -1.761 -2.124 2.338 H2 59R 29 59R H2A H2A H 0 1 N N N 8.601 -0.725 24.061 -0.834 -0.626 2.084 H2A 59R 30 59R HN2 HN2 H 0 1 N N N 8.959 1.711 23.843 -1.246 -0.903 -0.295 HN2 59R 31 59R H3 H3 H 0 1 N N N 11.015 -0.139 24.593 -3.714 -1.091 1.306 H3 59R 32 59R H3A H3A H 0 1 N N N 10.617 0.571 22.980 -2.787 0.407 1.052 H3A 59R 33 59R H4 H4 H 0 1 N N N 11.313 2.837 23.970 -3.126 0.202 -1.396 H4 59R 34 59R H4A H4A H 0 1 N N N 11.979 1.924 25.356 -4.053 -1.296 -1.142 H4A 59R 35 59R "HN1'" "HN1'" H 0 0 N N N 6.484 1.260 29.702 4.077 -3.617 -1.399 "HN1'" 59R 36 59R H12 H12 H 0 1 N N N 12.408 2.879 21.896 -6.262 -1.234 -0.134 H12 59R 37 59R H14 H14 H 0 1 N N N 16.027 0.677 21.323 -8.210 2.555 0.137 H14 59R 38 59R H15 H15 H 0 1 N N N 15.726 -0.455 23.506 -6.081 3.683 -0.372 H15 59R 39 59R H16 H16 H 0 1 N N N 13.714 0.057 24.861 -4.043 2.355 -0.752 H16 59R 40 59R "H2'" "H2'" H 0 1 N N N 7.143 -0.231 27.636 1.304 -2.655 -1.713 "H2'" 59R 41 59R "H2'A" "H2'A" H 0 0 N N N 5.546 -0.260 28.398 1.871 -4.153 -0.914 "H2'A" 59R 42 59R "H3'" "H3'" H 0 1 N N N 4.961 0.445 26.157 2.521 -3.015 1.028 "H3'" 59R 43 59R H3AA H3AA H 0 0 N N N 2.555 4.093 27.262 3.066 2.207 -1.547 H3AA 59R 44 59R "H4'" "H4'" H 0 1 N N N 4.009 2.253 27.491 4.214 -1.504 0.647 "H4'" 59R 45 59R H4AA H4AA H 0 0 N N N 1.851 6.246 28.276 4.967 3.796 -1.754 H4AA 59R 46 59R "H5'" "H5'" H 0 1 N N N 5.287 3.027 29.295 4.895 -1.452 -1.592 "H5'" 59R 47 59R "H5'A" "H5'A" H 0 0 N N N 6.605 3.563 28.227 3.299 -0.873 -2.162 "H5'A" 59R 48 59R H5A H5A H 0 1 N N N 3.412 8.168 28.320 6.941 3.490 -0.280 H5A 59R 49 59R HN6A HN6A H 0 0 N N N 6.721 7.905 26.947 7.212 0.850 2.164 HN6A 59R 50 59R HN6B HN6B H 0 0 N N N 5.446 8.922 26.873 7.961 2.185 1.472 HN6B 59R 51 59R H7A H7A H 0 1 N N N 4.264 3.208 25.388 2.410 0.219 1.124 H7A 59R 52 59R H7AA H7AA H 0 0 N N N 5.982 3.649 25.724 2.121 0.323 -0.629 H7AA 59R 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 59R C1 C2 SING N N 1 59R C1 O1 SING N N 2 59R C1 H1 SING N N 3 59R C1 H1A SING N N 4 59R O1 "C3'" SING N N 5 59R N2 C2 SING N N 6 59R C2 H2 SING N N 7 59R C2 H2A SING N N 8 59R C3 N2 SING N N 9 59R N2 HN2 SING N N 10 59R C3 C4 SING N N 11 59R C3 H3 SING N N 12 59R C3 H3A SING N N 13 59R C11 C4 SING N N 14 59R C4 H4 SING N N 15 59R C4 H4A SING N N 16 59R "C2'" "N1'" SING N N 17 59R "C5'" "N1'" SING N N 18 59R "N1'" "HN1'" SING N N 19 59R C12 C11 DOUB Y N 20 59R C11 C16 SING Y N 21 59R C13 C12 SING Y N 22 59R C12 H12 SING N N 23 59R F13 C13 SING N N 24 59R C13 C14 DOUB Y N 25 59R C14 C15 SING Y N 26 59R C14 H14 SING N N 27 59R C15 C16 DOUB Y N 28 59R C15 H15 SING N N 29 59R C16 H16 SING N N 30 59R C2A N1A DOUB Y N 31 59R N1A C6A SING Y N 32 59R "C3'" "C2'" SING N N 33 59R "C2'" "H2'" SING N N 34 59R "C2'" "H2'A" SING N N 35 59R C7A C2A SING N N 36 59R C2A C3A SING Y N 37 59R "C3'" "C4'" SING N N 38 59R "C3'" "H3'" SING N N 39 59R C3A C4A DOUB Y N 40 59R C3A H3AA SING N N 41 59R C7A "C4'" SING N N 42 59R "C4'" "C5'" SING N N 43 59R "C4'" "H4'" SING N N 44 59R C4A C5A SING Y N 45 59R C4A H4AA SING N N 46 59R "C5'" "H5'" SING N N 47 59R "C5'" "H5'A" SING N N 48 59R C6A C5A DOUB Y N 49 59R C5A H5A SING N N 50 59R C6A N6A SING N N 51 59R N6A HN6A SING N N 52 59R N6A HN6B SING N N 53 59R C7A H7A SING N N 54 59R C7A H7AA SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 59R SMILES ACDLabs 12.01 "Fc1cccc(c1)CCNCCOC2C(CNC2)Cc3nc(N)ccc3" 59R SMILES_CANONICAL CACTVS 3.370 "Nc1cccc(C[C@@H]2CNC[C@@H]2OCCNCCc3cccc(F)c3)n1" 59R SMILES CACTVS 3.370 "Nc1cccc(C[CH]2CNC[CH]2OCCNCCc3cccc(F)c3)n1" 59R SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(cc(c1)F)CCNCCO[C@H]2CNC[C@H]2Cc3cccc(n3)N" 59R SMILES "OpenEye OEToolkits" 1.7.0 "c1cc(cc(c1)F)CCNCCOC2CNCC2Cc3cccc(n3)N" 59R InChI InChI 1.03 "InChI=1S/C20H27FN4O/c21-17-4-1-3-15(11-17)7-8-23-9-10-26-19-14-24-13-16(19)12-18-5-2-6-20(22)25-18/h1-6,11,16,19,23-24H,7-10,12-14H2,(H2,22,25)/t16-,19+/m1/s1" 59R InChIKey InChI 1.03 LRTPFJLYXDIXQR-APWZRJJASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 59R "SYSTEMATIC NAME" ACDLabs 12.01 "6-{[(3R,4R)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine" 59R "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "6-[[(3R,4R)-4-[2-[2-(3-fluorophenyl)ethylamino]ethoxy]pyrrolidin-3-yl]methyl]pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 59R "Create component" 2010-06-30 RCSB 59R "Modify aromatic_flag" 2011-06-04 RCSB 59R "Modify descriptor" 2011-06-04 RCSB #