data_59S # _chem_comp.id 59S _chem_comp.name "(2S)-2-[[(2S)-2-[[(E)-3-(4-methoxyphenyl)prop-2-enoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]pentanamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H42 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-02 _chem_comp.pdbx_modified_date 2022-04-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 542.667 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 59S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7WO3 _chem_comp.pdbx_subcomponent_list "K3Z VAL LEU ELF" _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 59S C26 C9 C 0 1 N N N 19.989 16.919 30.564 -3.659 0.580 -1.039 C02 K3Z 1 59S C27 C22 C 0 1 N N N 19.257 17.670 31.712 -4.887 0.384 -0.269 C04 K3Z 2 59S C28 C10 C 0 1 N N N 20.219 17.342 32.570 -6.079 0.334 -0.900 C05 K3Z 3 59S C29 C23 C 0 1 Y N N 20.286 17.727 34.052 -7.313 0.137 -0.125 C06 K3Z 4 59S C30 C24 C 0 1 Y N N 19.281 18.383 34.726 -7.255 0.007 1.267 C07 K3Z 5 59S C31 C25 C 0 1 Y N N 19.474 18.676 36.084 -8.414 -0.177 1.987 C08 K3Z 6 59S C32 C26 C 0 1 Y N N 20.660 18.314 36.729 -9.639 -0.234 1.334 C09 K3Z 7 59S C34 C27 C 0 1 N N N 22.226 18.825 38.407 -12.004 -0.464 1.316 C11 K3Z 8 59S C35 C28 C 0 1 Y N N 21.666 17.647 36.030 -9.703 -0.106 -0.048 C12 K3Z 9 59S C36 C29 C 0 1 Y N N 21.478 17.359 34.700 -8.550 0.084 -0.778 C13 K3Z 10 59S O37 O4 O 0 1 N N N 21.020 17.351 30.176 -3.713 0.698 -2.249 O03 K3Z 11 59S O33 O3 O 0 1 N N N 20.872 18.606 38.092 -10.779 -0.416 2.049 O10 K3Z 12 59S N25 N4 N 0 1 N N N 19.497 15.615 30.035 -2.469 0.631 -0.409 N VAL 13 59S C21 C6 C 0 1 N N S 20.281 14.952 29.030 -1.240 0.827 -1.181 CA VAL 14 59S C20 C5 C 0 1 N N N 19.486 14.850 27.731 -0.072 0.255 -0.419 C VAL 15 59S O38 O5 O 0 1 N N N 18.378 14.432 27.755 -0.157 0.077 0.778 O VAL 16 59S C22 C7 C 0 1 N N N 20.585 13.550 29.583 -1.015 2.323 -1.411 CB VAL 17 59S C24 C8 C 0 1 N N N 21.433 12.695 28.571 -2.129 2.874 -2.303 CG1 VAL 18 59S C23 C21 C 0 1 N N N 21.327 13.722 30.967 -1.030 3.053 -0.066 CG2 VAL 19 59S N19 N3 N 0 1 N N N 20.116 15.291 26.467 1.068 -0.057 -1.067 N LEU 20 59S C14 C18 C 0 1 N N S 19.312 15.174 25.249 2.161 -0.719 -0.350 CA LEU 21 59S C13 C2 C 0 1 N N N 19.396 13.709 24.833 3.467 -0.420 -1.039 C LEU 22 59S O39 O6 O 0 1 N N N 20.396 13.108 25.005 3.484 0.278 -2.031 O LEU 23 59S C15 C3 C 0 1 N N N 19.866 16.084 24.144 1.923 -2.231 -0.342 CB LEU 24 59S C16 C19 C 0 1 N N N 20.116 17.549 24.636 0.662 -2.544 0.465 CG LEU 25 59S C17 C4 C 0 1 N N N 18.786 18.192 25.101 0.354 -4.040 0.370 CD1 LEU 26 59S C18 C20 C 0 1 N N N 20.722 18.360 23.484 0.884 -2.161 1.929 CD2 LEU 27 59S C07 C16 C 0 1 N N N 19.092 9.089 26.860 7.022 2.746 1.392 C6 ELF 28 59S C03 C12 C 0 1 N N S 18.508 11.601 23.940 5.887 -0.636 -1.222 C11 ELF 29 59S C06 C15 C 0 1 N N N 18.959 10.467 26.435 6.938 1.716 0.259 C13 ELF 30 59S C10 C1 C 0 1 N N N 16.460 10.111 26.998 7.905 0.152 1.927 C15 ELF 31 59S C04 C13 C 0 1 N N N 17.337 10.847 24.660 7.031 -0.736 -0.211 C17 ELF 32 59S C02 C11 C 0 1 N N N 18.649 11.292 22.463 6.110 -1.630 -2.332 C24 ELF 33 59S C05 C14 C 0 1 N N S 17.611 10.911 26.243 6.842 0.320 0.880 C25 ELF 34 59S C08 C17 C 0 1 N N N 18.376 8.837 28.125 8.357 2.569 2.116 C27 ELF 35 59S N12 N1 N 0 1 N N N 18.252 13.000 24.224 4.617 -0.927 -0.552 N3 ELF 36 59S N09 N2 N 0 1 N N N 16.872 9.010 27.989 8.558 1.173 2.484 N4 ELF 37 59S O01 O1 O 0 1 N N N 17.775 10.762 21.871 5.292 -2.493 -2.542 O3 ELF 38 59S O11 O2 O 0 1 N N N 15.318 10.377 26.790 8.182 -0.972 2.290 O4 ELF 39 59S H33 H33 H 0 1 N N N 18.337 18.232 31.784 -4.840 0.280 0.805 H041 K3Z 40 59S H12 H12 H 0 1 N N N 21.033 16.746 32.184 -6.127 0.438 -1.974 H051 K3Z 41 59S H35 H35 H 0 1 N N N 18.368 18.665 34.222 -6.303 0.050 1.775 H071 K3Z 42 59S H36 H36 H 0 1 N N N 18.699 19.186 36.637 -8.370 -0.278 3.062 H081 K3Z 43 59S H37 H37 H 0 1 N N N 22.322 19.047 39.480 -12.835 -0.613 2.006 H111 K3Z 44 59S H39 H39 H 0 1 N N N 22.606 19.675 37.822 -11.970 -1.290 0.605 H113 K3Z 45 59S H38 H38 H 0 1 N N N 22.809 17.924 38.165 -12.143 0.473 0.777 H112 K3Z 46 59S H40 H40 H 0 1 N N N 22.581 17.361 36.528 -10.657 -0.151 -0.551 H121 K3Z 47 59S H41 H41 H 0 1 N N N 22.252 16.846 34.148 -8.601 0.189 -1.851 H131 K3Z 48 59S H44 H44 H 0 1 N N N 18.645 15.213 30.370 -2.427 0.537 0.556 H VAL 49 59S H7 H7 H 0 1 N N N 21.224 15.489 28.847 -1.329 0.321 -2.142 HA VAL 50 59S H8 H8 H 0 1 N N N 19.634 13.028 29.765 -0.052 2.475 -1.897 HB VAL 51 59S H9 H9 H 0 1 N N N 21.628 11.702 29.003 -3.079 2.825 -1.770 HG11 VAL 52 59S H10 H10 H 0 1 N N N 20.875 12.582 27.630 -1.910 3.911 -2.559 HG12 VAL 53 59S H11 H11 H 0 1 N N N 22.388 13.203 28.373 -2.193 2.280 -3.214 HG13 VAL 54 59S H30 H30 H 0 1 N N N 20.704 14.324 31.645 -0.236 2.661 0.569 HG21 VAL 55 59S H31 H31 H 0 1 N N N 21.504 12.732 31.413 -0.870 4.119 -0.230 HG22 VAL 56 59S H32 H32 H 0 1 N N N 22.290 14.230 30.806 -1.993 2.901 0.420 HG23 VAL 57 59S H43 H43 H 0 1 N N N 21.048 15.652 26.446 1.164 0.156 -2.009 H2 LEU 58 59S H25 H25 H 0 1 N N N 18.264 15.440 25.453 2.198 -0.351 0.675 HA LEU 59 59S H2 H2 H 0 1 N N N 19.144 16.110 23.315 1.798 -2.585 -1.365 HB2 LEU 60 59S H3 H3 H 0 1 N N N 20.819 15.665 23.788 2.779 -2.730 0.113 HB3 LEU 61 59S H26 H26 H 0 1 N N N 20.822 17.528 25.479 -0.177 -1.975 0.064 HG LEU 62 59S H4 H4 H 0 1 N N N 18.362 17.602 25.927 1.193 -4.609 0.771 HD11 LEU 63 59S H5 H5 H 0 1 N N N 18.976 19.219 25.445 -0.544 -4.264 0.945 HD12 LEU 64 59S H6 H6 H 0 1 N N N 18.075 18.212 24.262 0.196 -4.313 -0.673 HD13 LEU 65 59S H27 H27 H 0 1 N N N 20.903 19.393 23.817 1.722 -2.730 2.331 HD21 LEU 66 59S H28 H28 H 0 1 N N N 21.674 17.903 23.175 1.103 -1.095 1.997 HD22 LEU 67 59S H29 H29 H 0 1 N N N 20.025 18.366 22.633 -0.015 -2.385 2.504 HD23 LEU 68 59S H21 H21 H 0 1 N N N 18.678 8.434 26.079 6.961 3.752 0.977 H1 ELF 69 59S H22 H22 H 0 1 N N N 20.159 8.861 27.003 6.202 2.586 2.093 H2 ELF 70 59S H15 H15 H 0 1 N N N 19.443 11.305 24.438 5.857 0.371 -1.637 H3 ELF 71 59S H19 H19 H 0 1 N N N 19.496 10.584 25.482 7.831 1.780 -0.362 H4 ELF 72 59S H20 H20 H 0 1 N N N 19.424 11.107 27.199 6.053 1.909 -0.347 H5 ELF 73 59S H16 H16 H 0 1 N N N 16.379 11.334 24.426 7.032 -1.728 0.241 H6 ELF 74 59S H17 H17 H 0 1 N N N 17.307 9.799 24.328 7.981 -0.567 -0.718 H7 ELF 75 59S H14 H14 H 0 1 N N N 19.559 11.559 21.946 7.001 -1.571 -2.939 H8 ELF 76 59S H18 H18 H 0 1 N N N 17.529 11.966 26.544 5.860 0.196 1.338 H9 ELF 77 59S H23 H23 H 0 1 N N N 18.584 7.807 28.449 9.167 2.889 1.461 H10 ELF 78 59S H24 H24 H 0 1 N N N 18.745 9.542 28.885 8.361 3.181 3.019 H11 ELF 79 59S H1 H1 H 0 1 N N N 17.379 13.445 24.025 4.604 -1.485 0.241 H12 ELF 80 59S H42 H42 H 0 1 N N N 16.211 8.458 28.498 9.207 0.975 3.177 H15 ELF 81 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 59S O01 C02 DOUB N N 1 59S C02 C03 SING N N 2 59S C18 C16 SING N N 3 59S C03 N12 SING N N 4 59S C03 C04 SING N N 5 59S C15 C16 SING N N 6 59S C15 C14 SING N N 7 59S N12 C13 SING N N 8 59S C16 C17 SING N N 9 59S C04 C05 SING N N 10 59S C13 O39 DOUB N N 11 59S C13 C14 SING N N 12 59S C14 N19 SING N N 13 59S C05 C06 SING N N 14 59S C05 C10 SING N N 15 59S C06 C07 SING N N 16 59S N19 C20 SING N N 17 59S O11 C10 DOUB N N 18 59S C07 C08 SING N N 19 59S C10 N09 SING N N 20 59S C20 O38 DOUB N N 21 59S C20 C21 SING N N 22 59S N09 C08 SING N N 23 59S C24 C22 SING N N 24 59S C21 C22 SING N N 25 59S C21 N25 SING N N 26 59S C22 C23 SING N N 27 59S N25 C26 SING N N 28 59S O37 C26 DOUB N N 29 59S C26 C27 SING N N 30 59S C27 C28 DOUB N E 31 59S C28 C29 SING N N 32 59S C29 C36 DOUB Y N 33 59S C29 C30 SING Y N 34 59S C36 C35 SING Y N 35 59S C30 C31 DOUB Y N 36 59S C35 C32 DOUB Y N 37 59S C31 C32 SING Y N 38 59S C32 O33 SING N N 39 59S O33 C34 SING N N 40 59S N12 H1 SING N N 41 59S C15 H2 SING N N 42 59S C15 H3 SING N N 43 59S C17 H4 SING N N 44 59S C17 H5 SING N N 45 59S C17 H6 SING N N 46 59S C21 H7 SING N N 47 59S C22 H8 SING N N 48 59S C24 H9 SING N N 49 59S C24 H10 SING N N 50 59S C24 H11 SING N N 51 59S C28 H12 SING N N 52 59S C02 H14 SING N N 53 59S C03 H15 SING N N 54 59S C04 H16 SING N N 55 59S C04 H17 SING N N 56 59S C05 H18 SING N N 57 59S C06 H19 SING N N 58 59S C06 H20 SING N N 59 59S C07 H21 SING N N 60 59S C07 H22 SING N N 61 59S C08 H23 SING N N 62 59S C08 H24 SING N N 63 59S C14 H25 SING N N 64 59S C16 H26 SING N N 65 59S C18 H27 SING N N 66 59S C18 H28 SING N N 67 59S C18 H29 SING N N 68 59S C23 H30 SING N N 69 59S C23 H31 SING N N 70 59S C23 H32 SING N N 71 59S C27 H33 SING N N 72 59S C30 H35 SING N N 73 59S C31 H36 SING N N 74 59S C34 H37 SING N N 75 59S C34 H38 SING N N 76 59S C34 H39 SING N N 77 59S C35 H40 SING N N 78 59S C36 H41 SING N N 79 59S N09 H42 SING N N 80 59S N19 H43 SING N N 81 59S N25 H44 SING N N 82 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 59S InChI InChI 1.03 "InChI=1S/C29H42N4O6/c1-18(2)15-24(28(37)31-22(17-34)16-21-7-6-14-30-27(21)36)32-29(38)26(19(3)4)33-25(35)13-10-20-8-11-23(39-5)12-9-20/h8-13,17-19,21-22,24,26H,6-7,14-16H2,1-5H3,(H,30,36)(H,31,37)(H,32,38)(H,33,35)/b13-10+/t21-,22-,24-,26-/m0/s1" 59S InChIKey InChI 1.03 ICHROBBMJKBDDC-SXDMNLNLSA-N 59S SMILES_CANONICAL CACTVS 3.385 "COc1ccc(/C=C/C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C[C@@H]2CCCNC2=O)C=O)cc1" 59S SMILES CACTVS 3.385 "COc1ccc(C=CC(=O)N[CH](C(C)C)C(=O)N[CH](CC(C)C)C(=O)N[CH](C[CH]2CCCNC2=O)C=O)cc1" 59S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCCNC1=O)C=O)NC(=O)[C@H](C(C)C)NC(=O)/C=C/c2ccc(cc2)OC" 59S SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCCNC1=O)C=O)NC(=O)C(C(C)C)NC(=O)C=Cc2ccc(cc2)OC" # _pdbx_chem_comp_identifier.comp_id 59S _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[(2~{S})-2-[[(~{E})-3-(4-methoxyphenyl)prop-2-enoyl]amino]-3-methyl-butanoyl]amino]-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]pentanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 59S "Create component" 2022-02-02 PDBJ 59S "Initial release" 2022-04-13 RCSB ##