data_59W # _chem_comp.id 59W _chem_comp.name "6-{[(3S,4S)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H27 F N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-07-01 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 358.453 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 59W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NNZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 59W C1 C1 C 0 1 N N N 16.612 4.277 58.064 -0.347 3.305 -0.391 C1 59W 1 59W O1 O1 O 0 1 N N N 15.825 3.224 57.505 -1.239 2.290 0.074 O1 59W 2 59W C2 C2 C 0 1 N N N 17.736 4.590 57.092 1.080 2.969 0.046 C2 59W 3 59W N2 N2 N 0 1 N N N 17.212 5.157 55.857 1.518 1.734 -0.618 N2 59W 4 59W C3 C3 C 0 1 N N N 18.104 5.917 55.002 2.887 1.379 -0.222 C3 59W 5 59W C4 C4 C 0 1 N N N 18.385 7.274 55.631 3.306 0.090 -0.932 C4 59W 6 59W "N1'" "N1'" N 0 1 N N N 16.148 -0.340 57.248 -4.694 2.714 0.877 "N1'" 59W 7 59W C11 C11 C 0 1 Y N N 19.042 8.198 54.640 4.711 -0.273 -0.525 C11 59W 8 59W C12 C12 C 0 1 Y N N 18.270 9.215 54.095 4.924 -1.083 0.575 C12 59W 9 59W C13 C13 C 0 1 Y N N 18.836 10.095 53.183 6.215 -1.417 0.948 C13 59W 10 59W F13 F13 F 0 1 N N N 18.054 11.068 52.665 6.424 -2.209 2.022 F13 59W 11 59W C14 C14 C 0 1 Y N N 20.185 9.972 52.818 7.291 -0.939 0.219 C14 59W 12 59W C15 C15 C 0 1 Y N N 20.959 8.937 53.361 7.075 -0.130 -0.881 C15 59W 13 59W C16 C16 C 0 1 Y N N 20.379 8.047 54.276 5.786 0.199 -1.255 C16 59W 14 59W N1A N1A N 0 1 Y N N 12.041 -0.110 58.459 -4.271 -1.528 0.357 N1A 59W 15 59W "C2'" "C2'" C 0 1 N N N 16.691 0.955 56.858 -3.329 3.300 0.829 "C2'" 59W 16 59W C2A C2A C 0 1 Y N N 12.480 1.077 58.947 -3.132 -1.302 -0.269 C2A 59W 17 59W "C3'" "C3'" C 0 1 N N S 16.223 1.930 57.973 -2.605 2.509 -0.282 "C3'" 59W 18 59W C3A C3A C 0 1 Y N N 11.860 1.598 60.094 -2.591 -2.248 -1.117 C3A 59W 19 59W "C4'" "C4'" C 0 1 N N S 15.045 1.264 58.684 -3.357 1.165 -0.373 "C4'" 59W 20 59W C4A C4A C 0 1 Y N N 10.824 0.911 60.740 -3.258 -3.450 -1.309 C4A 59W 21 59W "C5'" "C5'" C 0 1 N N N 15.315 -0.233 58.453 -4.472 1.257 0.691 "C5'" 59W 22 59W C5A C5A C 0 1 Y N N 10.399 -0.313 60.207 -4.450 -3.658 -0.639 C5A 59W 23 59W C6A C6A C 0 1 Y N N 11.030 -0.803 59.054 -4.937 -2.661 0.200 C6A 59W 24 59W N6A N6A N 0 1 N N N 10.646 -1.993 58.506 -6.134 -2.857 0.880 N6A 59W 25 59W C7A C7A C 0 1 N N N 13.641 1.808 58.257 -2.412 0.005 -0.056 C7A 59W 26 59W H1 H1 H 0 1 N N N 17.029 3.961 59.031 -0.391 3.357 -1.479 H1 59W 27 59W H1A H1A H 0 1 N N N 15.989 5.170 58.218 -0.639 4.267 0.031 H1A 59W 28 59W H2 H2 H 0 1 N N N 18.420 5.315 57.557 1.747 3.786 -0.231 H2 59W 29 59W H2A H2A H 0 1 N N N 18.277 3.661 56.858 1.106 2.830 1.127 H2A 59W 30 59W HN2 HN2 H 0 1 N N N 16.882 4.388 55.310 0.879 0.976 -0.429 HN2 59W 31 59W H3 H3 H 0 1 N N N 19.049 5.368 54.880 3.566 2.185 -0.501 H3 59W 32 59W H3A H3A H 0 1 N N N 17.633 6.061 54.018 2.925 1.229 0.857 H3A 59W 33 59W H4 H4 H 0 1 N N N 17.435 7.720 55.961 2.627 -0.715 -0.653 H4 59W 34 59W H4A H4A H 0 1 N N N 19.055 7.138 56.493 3.267 0.241 -2.010 H4A 59W 35 59W "HN1'" "HN1'" H 0 0 N N N 15.588 -0.693 56.499 -5.137 2.903 1.763 "HN1'" 59W 36 59W H12 H12 H 0 1 N N N 17.234 9.321 54.379 4.084 -1.454 1.143 H12 59W 37 59W H14 H14 H 0 1 N N N 20.625 10.671 52.122 8.298 -1.199 0.509 H14 59W 38 59W H15 H15 H 0 1 N N N 21.995 8.826 53.076 7.914 0.243 -1.450 H15 59W 39 59W H16 H16 H 0 1 N N N 20.967 7.246 54.698 5.618 0.831 -2.115 H16 59W 40 59W "H2'" "H2'" H 0 1 N N N 17.789 0.922 56.796 -3.378 4.358 0.572 "H2'" 59W 41 59W "H2'A" "H2'A" H 0 0 N N N 16.308 1.265 55.874 -2.823 3.163 1.785 "H2'A" 59W 42 59W "H3'" "H3'" H 0 1 N N N 17.080 2.114 58.638 -2.668 3.044 -1.230 "H3'" 59W 43 59W H3AA H3AA H 0 0 N N N 12.189 2.549 60.487 -1.658 -2.054 -1.626 H3AA 59W 44 59W "H4'" "H4'" H 0 1 N N N 14.986 1.493 59.758 -3.790 1.040 -1.365 "H4'" 59W 45 59W H4AA H4AA H 0 0 N N N 10.363 1.316 61.629 -2.856 -4.205 -1.968 H4AA 59W 46 59W "H5'" "H5'" H 0 1 N N N 14.368 -0.774 58.311 -4.145 0.800 1.625 "H5'" 59W 47 59W "H5'A" "H5'A" H 0 0 N N N 15.840 -0.664 59.319 -5.382 0.777 0.331 "H5'A" 59W 48 59W H5A H5A H 0 1 N N N 9.600 -0.869 60.675 -4.996 -4.581 -0.766 H5A 59W 49 59W HN6A HN6A H 0 0 N N N 11.204 -2.184 57.698 -6.477 -2.165 1.466 HN6A 59W 50 59W HN6B HN6B H 0 0 N N N 10.769 -2.724 59.177 -6.625 -3.686 0.768 HN6B 59W 51 59W H7A H7A H 0 1 N N N 13.535 1.677 57.170 -2.086 0.075 0.982 H7A 59W 52 59W H7AA H7AA H 0 0 N N N 13.587 2.873 58.525 -1.544 0.053 -0.714 H7AA 59W 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 59W C2 C1 SING N N 1 59W O1 C1 SING N N 2 59W C1 H1 SING N N 3 59W C1 H1A SING N N 4 59W O1 "C3'" SING N N 5 59W N2 C2 SING N N 6 59W C2 H2 SING N N 7 59W C2 H2A SING N N 8 59W C3 N2 SING N N 9 59W N2 HN2 SING N N 10 59W C3 C4 SING N N 11 59W C3 H3 SING N N 12 59W C3 H3A SING N N 13 59W C11 C4 SING N N 14 59W C4 H4 SING N N 15 59W C4 H4A SING N N 16 59W "C2'" "N1'" SING N N 17 59W "N1'" "C5'" SING N N 18 59W "N1'" "HN1'" SING N N 19 59W C12 C11 DOUB Y N 20 59W C16 C11 SING Y N 21 59W C13 C12 SING Y N 22 59W C12 H12 SING N N 23 59W F13 C13 SING N N 24 59W C14 C13 DOUB Y N 25 59W C14 C15 SING Y N 26 59W C14 H14 SING N N 27 59W C15 C16 DOUB Y N 28 59W C15 H15 SING N N 29 59W C16 H16 SING N N 30 59W N1A C2A DOUB Y N 31 59W N1A C6A SING Y N 32 59W "C2'" "C3'" SING N N 33 59W "C2'" "H2'" SING N N 34 59W "C2'" "H2'A" SING N N 35 59W C7A C2A SING N N 36 59W C2A C3A SING Y N 37 59W "C3'" "C4'" SING N N 38 59W "C3'" "H3'" SING N N 39 59W C3A C4A DOUB Y N 40 59W C3A H3AA SING N N 41 59W C7A "C4'" SING N N 42 59W "C5'" "C4'" SING N N 43 59W "C4'" "H4'" SING N N 44 59W C5A C4A SING Y N 45 59W C4A H4AA SING N N 46 59W "C5'" "H5'" SING N N 47 59W "C5'" "H5'A" SING N N 48 59W C6A C5A DOUB Y N 49 59W C5A H5A SING N N 50 59W N6A C6A SING N N 51 59W N6A HN6A SING N N 52 59W N6A HN6B SING N N 53 59W C7A H7A SING N N 54 59W C7A H7AA SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 59W SMILES ACDLabs 12.01 "Fc1cccc(c1)CCNCCOC2C(CNC2)Cc3nc(N)ccc3" 59W SMILES_CANONICAL CACTVS 3.370 "Nc1cccc(C[C@H]2CNC[C@H]2OCCNCCc3cccc(F)c3)n1" 59W SMILES CACTVS 3.370 "Nc1cccc(C[CH]2CNC[CH]2OCCNCCc3cccc(F)c3)n1" 59W SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(cc(c1)F)CCNCCO[C@@H]2CNC[C@@H]2Cc3cccc(n3)N" 59W SMILES "OpenEye OEToolkits" 1.7.0 "c1cc(cc(c1)F)CCNCCOC2CNCC2Cc3cccc(n3)N" 59W InChI InChI 1.03 "InChI=1S/C20H27FN4O/c21-17-4-1-3-15(11-17)7-8-23-9-10-26-19-14-24-13-16(19)12-18-5-2-6-20(22)25-18/h1-6,11,16,19,23-24H,7-10,12-14H2,(H2,22,25)/t16-,19+/m0/s1" 59W InChIKey InChI 1.03 LRTPFJLYXDIXQR-QFBILLFUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 59W "SYSTEMATIC NAME" ACDLabs 12.01 "6-{[(3S,4S)-4-(2-{[2-(3-fluorophenyl)ethyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine" 59W "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "6-[[(3S,4S)-4-[2-[2-(3-fluorophenyl)ethylamino]ethoxy]pyrrolidin-3-yl]methyl]pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 59W "Create component" 2010-07-01 RCSB 59W "Modify aromatic_flag" 2011-06-04 RCSB 59W "Modify descriptor" 2011-06-04 RCSB #