data_5BI # _chem_comp.id 5BI _chem_comp.name "methyl 3-O-(4-methylbenzoyl)-2-O-[2-nitro-4-(trifluoromethyl)benzoyl]-beta-D-talopyranoside" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H22 F3 N O10" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-16 _chem_comp.pdbx_modified_date 2022-07-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 529.417 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5BI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RH0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5BI N1 N1 N 1 1 N N N 16.176 -13.049 0.413 -1.980 1.737 -2.026 N1 5BI 1 5BI C6 C1 C 0 1 N N N 20.275 -5.759 -0.219 2.114 -4.223 2.271 C6 5BI 2 5BI C2 C2 C 0 1 N N S 18.841 -9.401 -1.955 1.254 -1.704 -1.075 C2 5BI 3 5BI O2 O1 O 0 1 N N N 18.638 -10.161 -0.738 0.084 -1.169 -0.401 O2 5BI 4 5BI C4 C3 C 0 1 N N S 18.243 -7.096 -1.057 2.427 -2.036 1.101 C4 5BI 5 5BI O4 O2 O 0 1 N N N 17.940 -7.397 0.316 1.307 -1.519 1.822 O4 5BI 6 5BI C5 C4 C 0 1 N N R 19.728 -6.732 -1.216 2.258 -3.545 0.907 C5 5BI 7 5BI O5 O3 O 0 1 N N N 20.558 -7.897 -1.076 1.087 -3.796 0.123 O5 5BI 8 5BI C1 C5 C 0 1 N N R 20.258 -8.874 -2.061 1.129 -3.226 -1.186 C1 5BI 9 5BI O1 O4 O 0 1 N N N 21.161 -9.946 -1.957 -0.071 -3.556 -1.889 O1 5BI 10 5BI C7 C6 C 0 1 N N N 22.425 -9.632 -2.506 -0.228 -4.952 -2.147 C7 5BI 11 5BI C8 C7 C 0 1 N N N 18.276 -11.455 -0.875 -0.961 -0.819 -1.175 C8 5BI 12 5BI C3 C8 C 0 1 N N S 17.875 -8.227 -2.037 2.510 -1.359 -0.270 C3 5BI 13 5BI O3 O5 O 0 1 N N N 16.534 -8.733 -1.911 2.596 0.080 -0.097 O3 5BI 14 5BI C9 C9 C 0 1 N N N 15.550 -8.067 -2.532 3.830 0.611 0.002 C9 5BI 15 5BI O6 O6 O 0 1 N N N 21.672 -5.488 -0.481 2.072 -5.641 2.097 O6 5BI 16 5BI O8 O7 O 0 1 N N N 15.715 -7.041 -3.100 4.808 -0.108 -0.054 O8 5BI 17 5BI O7 O8 O 0 1 N N N 17.744 -11.918 -1.843 -0.897 -0.956 -2.381 O7 5BI 18 5BI CA1 C10 C 0 1 Y N N 18.537 -12.277 0.326 -2.185 -0.268 -0.559 CA1 5BI 19 5BI CB1 C11 C 0 1 Y N N 14.247 -8.774 -2.447 3.995 2.069 0.180 CB1 5BI 20 5BI CB2 C12 C 0 1 Y N N 13.098 -8.223 -3.006 2.873 2.897 0.252 CB2 5BI 21 5BI CB6 C13 C 0 1 Y N N 14.150 -10.005 -1.813 5.272 2.623 0.283 CB6 5BI 22 5BI CB3 C14 C 0 1 Y N N 11.884 -8.882 -2.906 3.034 4.257 0.418 CB3 5BI 23 5BI CB5 C15 C 0 1 Y N N 12.927 -10.649 -1.716 5.418 3.984 0.450 CB5 5BI 24 5BI CB4 C16 C 0 1 Y N N 11.778 -10.094 -2.240 4.303 4.801 0.514 CB4 5BI 25 5BI C10 C17 C 0 1 N N N 10.444 -10.763 -2.049 4.470 6.287 0.696 C10 5BI 26 5BI CA6 C18 C 0 1 Y N N 19.808 -12.318 0.892 -2.849 -0.980 0.442 CA6 5BI 27 5BI CA2 C19 C 0 1 Y N N 17.577 -13.134 0.855 -2.681 0.971 -0.970 CA2 5BI 28 5BI CA5 C20 C 0 1 Y N N 20.089 -13.167 1.951 -3.991 -0.460 1.014 CA5 5BI 29 5BI CA3 C21 C 0 1 Y N N 17.839 -13.997 1.898 -3.824 1.480 -0.390 CA3 5BI 30 5BI CA4 C22 C 0 1 Y N N 19.106 -13.996 2.473 -4.479 0.766 0.597 CA4 5BI 31 5BI C11 C23 C 0 1 N N N 19.373 -14.812 3.689 -5.728 1.329 1.227 C11 5BI 32 5BI ON1 O9 O 0 1 N N N 15.833 -12.114 -0.291 -0.912 1.342 -2.457 ON1 5BI 33 5BI ON2 O10 O -1 1 N N N 15.426 -13.957 0.700 -2.476 2.758 -2.468 ON2 5BI 34 5BI F1 F1 F 0 1 N N N 18.513 -15.755 3.818 -6.204 0.438 2.195 F1 5BI 35 5BI F2 F2 F 0 1 N N N 19.371 -14.068 4.828 -5.434 2.558 1.828 F2 5BI 36 5BI F3 F3 F 0 1 N N N 20.536 -15.424 3.634 -6.704 1.513 0.242 F3 5BI 37 5BI H1 H1 H 0 1 N N N 19.707 -4.819 -0.283 2.964 -3.959 2.900 H1 5BI 38 5BI H2 H2 H 0 1 N N N 20.173 -6.182 0.791 1.192 -3.889 2.748 H2 5BI 39 5BI H3 H3 H 0 1 N N N 18.655 -10.055 -2.820 1.329 -1.271 -2.072 H3 5BI 40 5BI H4 H4 H 0 1 N N N 17.660 -6.211 -1.353 3.342 -1.840 1.661 H4 5BI 41 5BI H5 H5 H 0 1 N N N 18.190 -6.663 0.864 1.192 -1.906 2.701 H5 5BI 42 5BI H6 H6 H 0 1 N N N 19.866 -6.310 -2.223 3.132 -3.945 0.393 H6 5BI 43 5BI H7 H7 H 0 1 N N N 20.365 -8.415 -3.055 1.988 -3.622 -1.728 H7 5BI 44 5BI H8 H8 H 0 1 N N N 23.096 -10.498 -2.402 -0.249 -5.496 -1.203 H8 5BI 45 5BI H9 H9 H 0 1 N N N 22.310 -9.383 -3.571 -1.163 -5.119 -2.683 H9 5BI 46 5BI H10 H10 H 0 1 N N N 22.853 -8.771 -1.972 0.606 -5.306 -2.753 H10 5BI 47 5BI H11 H11 H 0 1 N N N 17.977 -7.806 -3.048 3.393 -1.716 -0.801 H11 5BI 48 5BI H12 H12 H 0 1 N N N 22.001 -4.870 0.161 1.982 -6.136 2.922 H12 5BI 49 5BI H13 H13 H 0 1 N N N 13.153 -7.275 -3.521 1.882 2.475 0.176 H13 5BI 50 5BI H14 H14 H 0 1 N N N 15.033 -10.464 -1.393 6.143 1.987 0.233 H14 5BI 51 5BI H15 H15 H 0 1 N N N 11.004 -8.444 -3.355 2.167 4.899 0.473 H15 5BI 52 5BI H16 H16 H 0 1 N N N 12.872 -11.606 -1.219 6.406 4.415 0.530 H16 5BI 53 5BI H17 H17 H 0 1 N N N 10.252 -11.446 -2.890 4.486 6.524 1.760 H17 5BI 54 5BI H18 H18 H 0 1 N N N 10.451 -11.333 -1.108 5.407 6.606 0.240 H18 5BI 55 5BI H19 H19 H 0 1 N N N 9.653 -9.999 -2.009 3.639 6.807 0.220 H19 5BI 56 5BI H20 H20 H 0 1 N N N 20.586 -11.679 0.501 -2.468 -1.938 0.767 H20 5BI 57 5BI H21 H21 H 0 1 N N N 21.083 -13.184 2.374 -4.505 -1.010 1.788 H21 5BI 58 5BI H22 H22 H 0 1 N N N 17.072 -14.664 2.263 -4.208 2.439 -0.707 H22 5BI 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5BI O8 C9 DOUB N N 1 5BI CB2 CB3 DOUB Y N 2 5BI CB2 CB1 SING Y N 3 5BI CB3 CB4 SING Y N 4 5BI C9 CB1 SING N N 5 5BI C9 O3 SING N N 6 5BI C7 O1 SING N N 7 5BI CB1 CB6 DOUB Y N 8 5BI CB4 C10 SING N N 9 5BI CB4 CB5 DOUB Y N 10 5BI C1 O1 SING N N 11 5BI C1 C2 SING N N 12 5BI C1 O5 SING N N 13 5BI C3 C2 SING N N 14 5BI C3 O3 SING N N 15 5BI C3 C4 SING N N 16 5BI C2 O2 SING N N 17 5BI O7 C8 DOUB N N 18 5BI CB6 CB5 SING Y N 19 5BI C5 O5 SING N N 20 5BI C5 C4 SING N N 21 5BI C5 C6 SING N N 22 5BI C4 O4 SING N N 23 5BI C8 O2 SING N N 24 5BI C8 CA1 SING N N 25 5BI O6 C6 SING N N 26 5BI ON1 N1 DOUB N N 27 5BI CA1 CA2 DOUB Y N 28 5BI CA1 CA6 SING Y N 29 5BI N1 ON2 SING N N 30 5BI N1 CA2 SING N N 31 5BI CA2 CA3 SING Y N 32 5BI CA6 CA5 DOUB Y N 33 5BI CA3 CA4 DOUB Y N 34 5BI CA5 CA4 SING Y N 35 5BI CA4 C11 SING N N 36 5BI F3 C11 SING N N 37 5BI C11 F1 SING N N 38 5BI C11 F2 SING N N 39 5BI C6 H1 SING N N 40 5BI C6 H2 SING N N 41 5BI C2 H3 SING N N 42 5BI C4 H4 SING N N 43 5BI O4 H5 SING N N 44 5BI C5 H6 SING N N 45 5BI C1 H7 SING N N 46 5BI C7 H8 SING N N 47 5BI C7 H9 SING N N 48 5BI C7 H10 SING N N 49 5BI C3 H11 SING N N 50 5BI O6 H12 SING N N 51 5BI CB2 H13 SING N N 52 5BI CB6 H14 SING N N 53 5BI CB3 H15 SING N N 54 5BI CB5 H16 SING N N 55 5BI C10 H17 SING N N 56 5BI C10 H18 SING N N 57 5BI C10 H19 SING N N 58 5BI CA6 H20 SING N N 59 5BI CA5 H21 SING N N 60 5BI CA3 H22 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5BI SMILES ACDLabs 12.01 "COC1OC(CO)C(O)C(OC(=O)c2ccc(C)cc2)C1OC(=O)c1ccc(cc1[N+]([O-])=O)C(F)(F)F" 5BI InChI InChI 1.03 "InChI=1S/C23H22F3NO10/c1-11-3-5-12(6-4-11)20(30)36-18-17(29)16(10-28)35-22(34-2)19(18)37-21(31)14-8-7-13(23(24,25)26)9-15(14)27(32)33/h3-9,16-19,22,28-29H,10H2,1-2H3/t16-,17+,18+,19+,22-/m1/s1" 5BI InChIKey InChI 1.03 VLBBOLJDXZIPOG-NOYKIMNZSA-N 5BI SMILES_CANONICAL CACTVS 3.385 "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](OC(=O)c2ccc(C)cc2)[C@@H]1OC(=O)c3ccc(cc3[N+]([O-])=O)C(F)(F)F" 5BI SMILES CACTVS 3.385 "CO[CH]1O[CH](CO)[CH](O)[CH](OC(=O)c2ccc(C)cc2)[CH]1OC(=O)c3ccc(cc3[N+]([O-])=O)C(F)(F)F" 5BI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C(=O)O[C@H]2[C@H]([C@H](O[C@H]([C@H]2OC(=O)c3ccc(cc3[N+](=O)[O-])C(F)(F)F)OC)CO)O" 5BI SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C(=O)OC2C(C(OC(C2OC(=O)c3ccc(cc3[N+](=O)[O-])C(F)(F)F)OC)CO)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5BI "SYSTEMATIC NAME" ACDLabs 12.01 "methyl 3-O-(4-methylbenzoyl)-2-O-[2-nitro-4-(trifluoromethyl)benzoyl]-beta-D-talopyranoside" 5BI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-4-(4-methylphenyl)carbonyloxy-5-oxidanyl-oxan-3-yl] 2-nitro-4-(trifluoromethyl)benzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5BI "Create component" 2021-07-16 RCSB 5BI "Initial release" 2022-07-13 RCSB #