data_5E9 # _chem_comp.id 5E9 _chem_comp.name "ethyl (2Z,4S)-4-{[(2R,5S)-5-amino-2-(4-fluorobenzyl)-6-methyl-4-oxoheptanoyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H36 F N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-09-16 _chem_comp.pdbx_modified_date 2016-03-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.580 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5E9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5DP5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5E9 C2 C1 C 0 1 N N R -7.873 -7.197 -1.380 1.337 0.731 0.249 C2 5E9 1 5E9 C3 C2 C 0 1 N N N -9.096 -6.386 -1.779 2.038 1.006 -1.083 C3 5E9 2 5E9 C4 C3 C 0 1 Y N N -10.277 -6.413 -0.824 3.409 1.575 -0.821 C4 5E9 3 5E9 C5 C4 C 0 1 Y N N -10.603 -5.263 -0.098 3.560 2.927 -0.575 C5 5E9 4 5E9 C6 C5 C 0 1 Y N N -11.684 -5.247 0.773 4.817 3.449 -0.334 C6 5E9 5 5E9 C7 C6 C 0 1 Y N N -12.463 -6.388 0.946 5.924 2.618 -0.340 C7 5E9 6 5E9 C8 C7 C 0 1 Y N N -12.153 -7.539 0.199 5.771 1.264 -0.586 C8 5E9 7 5E9 O1 O1 O 0 1 N N N -2.993 -11.065 -3.779 -4.524 -0.382 -1.545 O1 5E9 8 5E9 N1 N1 N 0 1 N N N -1.664 -9.309 -3.047 -4.376 -2.584 -2.068 N1 5E9 9 5E9 N2 N2 N 0 1 N N N -4.103 -7.942 2.056 1.483 -4.094 0.344 N2 5E9 10 5E9 N N3 N 0 1 N N N -6.959 -8.144 -3.449 -0.909 0.043 1.024 N 5E9 11 5E9 C C8 C 0 1 N N N -5.932 -7.466 0.374 1.852 -1.695 0.228 C 5E9 12 5E9 O O2 O 0 1 N N N -5.404 -8.368 -0.283 1.299 -1.687 -0.846 O 5E9 13 5E9 O3 O3 O 0 1 N N N -6.128 -5.860 -7.141 -2.806 2.173 0.187 O3 5E9 14 5E9 C16 C9 C 0 1 N N N -7.033 -5.879 -6.319 -3.749 2.236 0.952 C16 5E9 15 5E9 O2 O4 O 0 1 N N N -7.359 -4.645 -5.659 -4.618 3.263 0.868 O2 5E9 16 5E9 C18 C10 C 0 1 N N N -7.366 -3.523 -6.534 -4.366 4.257 -0.160 C18 5E9 17 5E9 C19 C11 C 0 1 N N N -8.522 -3.685 -7.515 -5.449 5.336 -0.102 C19 5E9 18 5E9 C15 C12 C 0 1 N N N -7.838 -7.116 -5.993 -3.941 1.192 1.969 C15 5E9 19 5E9 C14 C13 C 0 1 N N N -6.964 -8.351 -5.834 -3.128 0.139 2.003 C14 5E9 20 5E9 C10 C14 C 0 1 N N S -6.048 -8.125 -4.630 -2.327 -0.235 0.783 C10 5E9 21 5E9 C11 C15 C 0 1 N N N -4.958 -9.152 -4.525 -2.511 -1.725 0.489 C11 5E9 22 5E9 C12 C16 C 0 1 N N S -3.955 -8.904 -3.370 -3.981 -2.004 0.168 C12 5E9 23 5E9 C26 C17 C 0 1 N N N -3.206 -7.577 -3.408 -4.249 -3.529 0.132 C26 5E9 24 5E9 C25 C18 C 0 1 N N N -1.765 -7.860 -2.931 -4.075 -3.840 -1.371 C25 5E9 25 5E9 C13 C19 C 0 1 N N N -2.829 -9.896 -3.409 -4.325 -1.536 -1.229 C13 5E9 26 5E9 C17 C20 C 0 1 N N N -6.935 -7.120 -2.571 -0.094 0.335 -0.009 C17 5E9 27 5E9 O4 O5 O 0 1 N N N -6.168 -6.162 -2.682 -0.512 0.278 -1.146 O4 5E9 28 5E9 C21 C21 C 0 1 N N N -7.221 -6.748 -0.040 2.057 -0.405 0.979 C21 5E9 29 5E9 C20 C22 C 0 1 N N S -5.211 -7.014 1.652 2.336 -2.995 0.816 C20 5E9 30 5E9 C22 C23 C 0 1 N N N -4.636 -5.595 1.473 3.780 -3.246 0.379 C22 5E9 31 5E9 C24 C24 C 0 1 N N N -3.755 -5.491 0.227 4.689 -2.170 0.977 C24 5E9 32 5E9 C23 C25 C 0 1 N N N -3.865 -5.147 2.706 4.230 -4.624 0.869 C23 5E9 33 5E9 C9 C26 C 0 1 Y N N -11.062 -7.538 -0.682 4.513 0.743 -0.821 C9 5E9 34 5E9 F1 F1 F 0 1 N N N -13.530 -6.373 1.784 7.153 3.128 -0.105 F1 5E9 35 5E9 H1 H1 H 0 1 N N N -8.185 -8.245 -1.261 1.360 1.630 0.864 H1 5E9 36 5E9 H2 H2 H 0 1 N N N -8.780 -5.338 -1.887 2.131 0.076 -1.643 H2 5E9 37 5E9 H3 H3 H 0 1 N N N -9.445 -6.766 -2.751 1.452 1.721 -1.661 H3 5E9 38 5E9 H4 H4 H 0 1 N N N -10.004 -4.372 -0.217 2.696 3.575 -0.571 H4 5E9 39 5E9 H5 H5 H 0 1 N N N -11.922 -4.346 1.319 4.935 4.505 -0.142 H5 5E9 40 5E9 H6 H6 H 0 1 N N N -12.758 -8.427 0.304 6.634 0.615 -0.591 H6 5E9 41 5E9 H7 H7 H 0 1 N N N -0.820 -9.818 -2.877 -4.581 -2.519 -3.014 H7 5E9 42 5E9 H8 H8 H 0 1 N N N -3.670 -7.601 2.890 0.536 -3.985 0.674 H8 5E9 43 5E9 H9 H9 H 0 1 N N N -4.477 -8.854 2.223 1.509 -4.165 -0.663 H9 5E9 44 5E9 H11 H11 H 0 1 N N N -7.584 -8.912 -3.309 -0.557 0.018 1.928 H11 5E9 45 5E9 H12 H12 H 0 1 N N N -6.415 -3.476 -7.085 -3.390 4.712 0.006 H12 5E9 46 5E9 H13 H13 H 0 1 N N N -7.499 -2.599 -5.952 -4.382 3.779 -1.140 H13 5E9 47 5E9 H14 H14 H 0 1 N N N -8.544 -2.826 -8.201 -6.425 4.881 -0.268 H14 5E9 48 5E9 H15 H15 H 0 1 N N N -8.386 -4.612 -8.092 -5.433 5.814 0.878 H15 5E9 49 5E9 H16 H16 H 0 1 N N N -9.470 -3.735 -6.959 -5.260 6.082 -0.873 H16 5E9 50 5E9 H17 H17 H 0 1 N N N -8.913 -7.122 -5.885 -4.742 1.279 2.688 H17 5E9 51 5E9 H19 H19 H 0 1 N N N -6.986 -9.231 -6.460 -3.041 -0.447 2.906 H19 5E9 52 5E9 H21 H21 H 0 1 N N N -5.593 -7.128 -4.718 -2.671 0.349 -0.071 H21 5E9 53 5E9 H22 H22 H 0 1 N N N -5.426 -10.135 -4.370 -1.894 -2.007 -0.364 H22 5E9 54 5E9 H23 H23 H 0 1 N N N -4.398 -9.158 -5.472 -2.213 -2.307 1.361 H23 5E9 55 5E9 H24 H24 H 0 1 N N N -4.488 -8.991 -2.412 -4.629 -1.520 0.900 H24 5E9 56 5E9 H25 H25 H 0 1 N N N -3.194 -7.179 -4.433 -3.514 -4.068 0.730 H25 5E9 57 5E9 H26 H26 H 0 1 N N N -3.690 -6.850 -2.739 -5.262 -3.756 0.464 H26 5E9 58 5E9 H27 H27 H 0 1 N N N -1.029 -7.359 -3.576 -4.774 -4.619 -1.678 H27 5E9 59 5E9 H28 H28 H 0 1 N N N -1.621 -7.535 -1.890 -3.050 -4.150 -1.576 H28 5E9 60 5E9 H29 H29 H 0 1 N N N -6.993 -5.675 -0.124 3.123 -0.183 1.035 H29 5E9 61 5E9 H30 H30 H 0 1 N N N -7.961 -6.904 0.759 1.653 -0.503 1.987 H30 5E9 62 5E9 H31 H31 H 0 1 N N N -5.950 -6.980 2.466 2.290 -2.941 1.904 H31 5E9 63 5E9 H32 H32 H 0 1 N N N -5.485 -4.908 1.340 3.842 -3.209 -0.709 H32 5E9 64 5E9 H33 H33 H 0 1 N N N -3.366 -4.466 0.137 4.519 -2.109 2.052 H33 5E9 65 5E9 H34 H34 H 0 1 N N N -2.915 -6.196 0.312 5.731 -2.428 0.788 H34 5E9 66 5E9 H35 H35 H 0 1 N N N -4.351 -5.737 -0.665 4.463 -1.207 0.519 H35 5E9 67 5E9 H36 H36 H 0 1 N N N -4.511 -5.228 3.593 3.583 -5.390 0.442 H36 5E9 68 5E9 H37 H37 H 0 1 N N N -2.980 -5.787 2.838 5.259 -4.802 0.557 H37 5E9 69 5E9 H38 H38 H 0 1 N N N -3.546 -4.102 2.579 4.168 -4.660 1.957 H38 5E9 70 5E9 H39 H39 H 0 1 N N N -10.835 -8.425 -1.254 4.393 -0.314 -1.009 H39 5E9 71 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5E9 C19 C18 SING N N 1 5E9 O3 C16 DOUB N N 2 5E9 C18 O2 SING N N 3 5E9 C16 C15 SING N N 4 5E9 C16 O2 SING N N 5 5E9 C15 C14 DOUB N Z 6 5E9 C14 C10 SING N N 7 5E9 C10 C11 SING N N 8 5E9 C10 N SING N N 9 5E9 C11 C12 SING N N 10 5E9 O1 C13 DOUB N N 11 5E9 N C17 SING N N 12 5E9 C13 C12 SING N N 13 5E9 C13 N1 SING N N 14 5E9 C26 C12 SING N N 15 5E9 C26 C25 SING N N 16 5E9 N1 C25 SING N N 17 5E9 O4 C17 DOUB N N 18 5E9 C17 C2 SING N N 19 5E9 C3 C2 SING N N 20 5E9 C3 C4 SING N N 21 5E9 C2 C21 SING N N 22 5E9 C4 C9 DOUB Y N 23 5E9 C4 C5 SING Y N 24 5E9 C9 C8 SING Y N 25 5E9 O C DOUB N N 26 5E9 C5 C6 DOUB Y N 27 5E9 C21 C SING N N 28 5E9 C8 C7 DOUB Y N 29 5E9 C24 C22 SING N N 30 5E9 C C20 SING N N 31 5E9 C6 C7 SING Y N 32 5E9 C7 F1 SING N N 33 5E9 C22 C20 SING N N 34 5E9 C22 C23 SING N N 35 5E9 C20 N2 SING N N 36 5E9 C2 H1 SING N N 37 5E9 C3 H2 SING N N 38 5E9 C3 H3 SING N N 39 5E9 C5 H4 SING N N 40 5E9 C6 H5 SING N N 41 5E9 C8 H6 SING N N 42 5E9 N1 H7 SING N N 43 5E9 N2 H8 SING N N 44 5E9 N2 H9 SING N N 45 5E9 N H11 SING N N 46 5E9 C18 H12 SING N N 47 5E9 C18 H13 SING N N 48 5E9 C19 H14 SING N N 49 5E9 C19 H15 SING N N 50 5E9 C19 H16 SING N N 51 5E9 C15 H17 SING N N 52 5E9 C14 H19 SING N N 53 5E9 C10 H21 SING N N 54 5E9 C11 H22 SING N N 55 5E9 C11 H23 SING N N 56 5E9 C12 H24 SING N N 57 5E9 C26 H25 SING N N 58 5E9 C26 H26 SING N N 59 5E9 C25 H27 SING N N 60 5E9 C25 H28 SING N N 61 5E9 C21 H29 SING N N 62 5E9 C21 H30 SING N N 63 5E9 C20 H31 SING N N 64 5E9 C22 H32 SING N N 65 5E9 C24 H33 SING N N 66 5E9 C24 H34 SING N N 67 5E9 C24 H35 SING N N 68 5E9 C23 H36 SING N N 69 5E9 C23 H37 SING N N 70 5E9 C23 H38 SING N N 71 5E9 C9 H39 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5E9 SMILES ACDLabs 12.01 "C(CC(C(N)C(C)C)=O)(Cc1ccc(cc1)F)C(NC(/C=C\C(=O)OCC)CC2CCNC2=O)=O" 5E9 InChI InChI 1.03 "InChI=1S/C26H36FN3O5/c1-4-35-23(32)10-9-21(14-18-11-12-29-25(18)33)30-26(34)19(15-22(31)24(28)16(2)3)13-17-5-7-20(27)8-6-17/h5-10,16,18-19,21,24H,4,11-15,28H2,1-3H3,(H,29,33)(H,30,34)/t18-,19+,21+,24-/m0/s1" 5E9 InChIKey InChI 1.03 XNNMMJDBDBVGGO-HSJYVMOXSA-N 5E9 SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)\C=C/[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H](CC(=O)[C@@H](N)C(C)C)Cc2ccc(F)cc2" 5E9 SMILES CACTVS 3.385 "CCOC(=O)C=C[CH](C[CH]1CCNC1=O)NC(=O)[CH](CC(=O)[CH](N)C(C)C)Cc2ccc(F)cc2" 5E9 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCOC(=O)C=C[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](Cc2ccc(cc2)F)CC(=O)[C@H](C(C)C)N" 5E9 SMILES "OpenEye OEToolkits" 1.9.2 "CCOC(=O)C=CC(CC1CCNC1=O)NC(=O)C(Cc2ccc(cc2)F)CC(=O)C(C(C)C)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5E9 "SYSTEMATIC NAME" ACDLabs 12.01 "ethyl (2Z,4S)-4-{[(2R,5S)-5-amino-2-(4-fluorobenzyl)-6-methyl-4-oxoheptanoyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate" 5E9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "ethyl (4S)-4-[[(2R,5S)-5-azanyl-2-[(4-fluorophenyl)methyl]-6-methyl-4-oxidanylidene-heptanoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pent-2-enoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5E9 "Create component" 2015-09-16 RCSB 5E9 "Initial release" 2016-03-30 RCSB #