data_5KD # _chem_comp.id 5KD _chem_comp.name "4,4'-{[(3S)-3-(4-methoxyphenyl)cyclohexylidene]methanediyl}diphenol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H26 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-10-08 _chem_comp.pdbx_modified_date 2016-04-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 386.483 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5KD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5E0X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5KD O01 O1 O 0 1 N N N -6.668 -0.173 20.038 7.074 1.730 0.008 O01 5KD 1 5KD C02 C1 C 0 1 Y N N -6.053 1.003 20.485 5.782 1.314 0.058 C02 5KD 2 5KD C03 C2 C 0 1 Y N N -6.481 2.250 19.989 5.352 0.512 1.107 C03 5KD 3 5KD C04 C3 C 0 1 Y N N -5.856 3.434 20.437 4.042 0.087 1.161 C04 5KD 4 5KD C05 C4 C 0 1 Y N N -4.816 3.361 21.383 3.147 0.464 0.160 C05 5KD 5 5KD C06 C5 C 0 1 N N N -4.127 4.624 21.889 1.737 0.009 0.214 C06 5KD 6 5KD C07 C6 C 0 1 Y N N -2.713 4.926 21.378 1.418 -1.434 0.093 C07 5KD 7 5KD C08 C7 C 0 1 Y N N -2.440 4.969 20.002 0.842 -2.114 1.166 C08 5KD 8 5KD C09 C8 C 0 1 Y N N -1.135 5.238 19.545 0.546 -3.456 1.050 C09 5KD 9 5KD C10 C9 C 0 1 Y N N -0.098 5.458 20.453 0.821 -4.129 -0.133 C10 5KD 10 5KD O11 O2 O 0 1 N N N 1.196 5.724 19.989 0.529 -5.451 -0.244 O11 5KD 11 5KD C12 C10 C 0 1 Y N N -0.368 5.413 21.826 1.394 -3.454 -1.202 C12 5KD 12 5KD C13 C11 C 0 1 Y N N -1.671 5.142 22.282 1.688 -2.111 -1.095 C13 5KD 13 5KD C14 C12 C 0 1 N N N -4.774 5.415 22.842 0.752 0.902 0.373 C14 5KD 14 5KD C15 C13 C 0 1 N N N -4.608 6.890 22.744 1.055 2.379 0.492 C15 5KD 15 5KD C16 C14 C 0 1 N N N -5.691 7.678 23.430 0.183 3.138 -0.514 C16 5KD 16 5KD C17 C15 C 0 1 N N N -7.041 7.244 22.901 -1.286 2.776 -0.289 C17 5KD 17 5KD C18 C16 C 0 1 N N S -7.307 5.778 23.057 -1.502 1.287 -0.567 C18 5KD 18 5KD C19 C17 C 0 1 Y N N -8.757 5.635 23.497 -2.966 0.957 -0.428 C19 5KD 19 5KD C20 C18 C 0 1 Y N N -9.072 5.711 24.852 -3.662 0.443 -1.506 C20 5KD 20 5KD C21 C19 C 0 1 Y N N -10.414 5.588 25.275 -5.004 0.140 -1.382 C21 5KD 21 5KD C22 C20 C 0 1 Y N N -11.436 5.393 24.337 -5.653 0.351 -0.173 C22 5KD 22 5KD O23 O3 O 0 1 N N N -12.774 5.277 24.746 -6.973 0.053 -0.048 O23 5KD 23 5KD C24 C21 C 0 1 N N N -13.715 4.618 23.922 -7.575 0.296 1.225 C24 5KD 24 5KD C25 C22 C 0 1 Y N N -11.114 5.323 22.975 -4.951 0.866 0.907 C25 5KD 25 5KD C26 C23 C 0 1 Y N N -9.777 5.442 22.552 -3.608 1.163 0.779 C26 5KD 26 5KD C27 C24 C 0 1 N N N -6.089 4.959 23.393 -0.694 0.459 0.431 C27 5KD 27 5KD C28 C25 C 0 1 Y N N -4.394 2.112 21.877 3.581 1.269 -0.892 C28 5KD 28 5KD C29 C26 C 0 1 Y N N -5.012 0.934 21.424 4.892 1.695 -0.937 C29 5KD 29 5KD H1 H1 H 0 1 N N N -6.268 -0.922 20.464 7.234 2.570 0.460 H1 5KD 30 5KD H2 H2 H 0 1 N N N -7.284 2.300 19.269 6.046 0.221 1.883 H2 5KD 31 5KD H3 H3 H 0 1 N N N -6.175 4.393 20.055 3.708 -0.537 1.977 H3 5KD 32 5KD H5 H5 H 0 1 N N N -3.234 4.795 19.291 0.629 -1.591 2.086 H5 5KD 33 5KD H6 H6 H 0 1 N N N -0.935 5.274 18.484 0.100 -3.983 1.880 H6 5KD 34 5KD H7 H7 H 0 1 N N N 1.779 5.849 20.729 -0.360 -5.631 -0.579 H7 5KD 35 5KD H8 H8 H 0 1 N N N 0.426 5.587 22.537 1.607 -3.981 -2.121 H8 5KD 36 5KD H9 H9 H 0 1 N N N -1.868 5.101 23.343 2.130 -1.586 -1.929 H9 5KD 37 5KD H11 H11 H 0 1 N N N -3.644 7.160 23.199 0.828 2.719 1.502 H11 5KD 38 5KD H12 H12 H 0 1 N N N -4.601 7.167 21.679 2.107 2.556 0.271 H12 5KD 39 5KD H13 H13 H 0 1 N N N -5.646 7.497 24.514 0.318 4.210 -0.376 H13 5KD 40 5KD H14 H14 H 0 1 N N N -5.547 8.750 23.231 0.474 2.862 -1.528 H14 5KD 41 5KD H15 H15 H 0 1 N N N -7.091 7.494 21.831 -1.556 2.994 0.745 H15 5KD 42 5KD H16 H16 H 0 1 N N N -7.821 7.798 23.444 -1.913 3.364 -0.958 H16 5KD 43 5KD H17 H17 H 0 1 N N N -7.418 5.504 21.998 -1.171 1.055 -1.580 H17 5KD 44 5KD H18 H18 H 0 1 N N N -8.289 5.864 25.580 -3.157 0.279 -2.447 H18 5KD 45 5KD H19 H19 H 0 1 N N N -10.653 5.645 26.327 -5.549 -0.261 -2.224 H19 5KD 46 5KD H20 H20 H 0 1 N N N -14.701 4.629 24.409 -7.067 -0.296 1.986 H20 5KD 47 5KD H21 H21 H 0 1 N N N -13.779 5.135 22.953 -7.489 1.355 1.471 H21 5KD 48 5KD H22 H22 H 0 1 N N N -13.397 3.577 23.762 -8.627 0.016 1.189 H22 5KD 49 5KD H23 H23 H 0 1 N N N -11.897 5.177 22.245 -5.454 1.032 1.848 H23 5KD 50 5KD H24 H24 H 0 1 N N N -9.536 5.385 21.501 -3.061 1.564 1.619 H24 5KD 51 5KD H25 H25 H 0 1 N N N -6.266 3.939 23.021 -0.764 -0.597 0.170 H25 5KD 52 5KD H26 H26 H 0 1 N N N -5.998 4.939 24.489 -1.085 0.618 1.436 H26 5KD 53 5KD H27 H27 H 0 1 N N N -3.596 2.059 22.603 2.891 1.563 -1.669 H27 5KD 54 5KD H28 H28 H 0 1 N N N -4.686 -0.025 21.799 5.228 2.322 -1.750 H28 5KD 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5KD C09 C08 DOUB Y N 1 5KD C09 C10 SING Y N 2 5KD C03 C04 DOUB Y N 3 5KD C03 C02 SING Y N 4 5KD O11 C10 SING N N 5 5KD C08 C07 SING Y N 6 5KD O01 C02 SING N N 7 5KD C04 C05 SING Y N 8 5KD C10 C12 DOUB Y N 9 5KD C02 C29 DOUB Y N 10 5KD C07 C06 SING N N 11 5KD C07 C13 DOUB Y N 12 5KD C05 C28 DOUB Y N 13 5KD C05 C06 SING N N 14 5KD C29 C28 SING Y N 15 5KD C12 C13 SING Y N 16 5KD C06 C14 DOUB N N 17 5KD C26 C25 DOUB Y N 18 5KD C26 C19 SING Y N 19 5KD C15 C14 SING N N 20 5KD C15 C16 SING N N 21 5KD C14 C27 SING N N 22 5KD C17 C18 SING N N 23 5KD C17 C16 SING N N 24 5KD C25 C22 SING Y N 25 5KD C18 C27 SING N N 26 5KD C18 C19 SING N N 27 5KD C19 C20 DOUB Y N 28 5KD C24 O23 SING N N 29 5KD C22 O23 SING N N 30 5KD C22 C21 DOUB Y N 31 5KD C20 C21 SING Y N 32 5KD O01 H1 SING N N 33 5KD C03 H2 SING N N 34 5KD C04 H3 SING N N 35 5KD C08 H5 SING N N 36 5KD C09 H6 SING N N 37 5KD O11 H7 SING N N 38 5KD C12 H8 SING N N 39 5KD C13 H9 SING N N 40 5KD C15 H11 SING N N 41 5KD C15 H12 SING N N 42 5KD C16 H13 SING N N 43 5KD C16 H14 SING N N 44 5KD C17 H15 SING N N 45 5KD C17 H16 SING N N 46 5KD C18 H17 SING N N 47 5KD C20 H18 SING N N 48 5KD C21 H19 SING N N 49 5KD C24 H20 SING N N 50 5KD C24 H21 SING N N 51 5KD C24 H22 SING N N 52 5KD C25 H23 SING N N 53 5KD C26 H24 SING N N 54 5KD C27 H25 SING N N 55 5KD C27 H26 SING N N 56 5KD C28 H27 SING N N 57 5KD C29 H28 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5KD SMILES ACDLabs 12.01 "Oc1ccc(cc1)\C(=C2/CC(CCC2)c3ccc(OC)cc3)c4ccc(cc4)O" 5KD InChI InChI 1.03 "InChI=1S/C26H26O3/c1-29-25-15-9-18(10-16-25)21-3-2-4-22(17-21)26(19-5-11-23(27)12-6-19)20-7-13-24(28)14-8-20/h5-16,21,27-28H,2-4,17H2,1H3/t21-/m0/s1" 5KD InChIKey InChI 1.03 GRAXEIZXWPNVOA-NRFANRHFSA-N 5KD SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1)[C@H]2CCCC(C2)=C(c3ccc(O)cc3)c4ccc(O)cc4" 5KD SMILES CACTVS 3.385 "COc1ccc(cc1)[CH]2CCCC(C2)=C(c3ccc(O)cc3)c4ccc(O)cc4" 5KD SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1)[C@H]2CCCC(=C(c3ccc(cc3)O)c4ccc(cc4)O)C2" 5KD SMILES "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1)C2CCCC(=C(c3ccc(cc3)O)c4ccc(cc4)O)C2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5KD "SYSTEMATIC NAME" ACDLabs 12.01 "4,4'-{[(3S)-3-(4-methoxyphenyl)cyclohexylidene]methanediyl}diphenol" 5KD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "4-[(4-hydroxyphenyl)-[(3S)-3-(4-methoxyphenyl)cyclohexylidene]methyl]phenol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5KD "Create component" 2015-10-08 RCSB 5KD "Initial release" 2016-05-04 RCSB #