data_5O8 # _chem_comp.id 5O8 _chem_comp.name "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[2-azanyl-6-oxidanylidene-7-(phenylmethyl)-1~{H}-purin-7-ium-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-1,1,1-tris(fluoranyl)methanesulfonamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 F3 N6 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2015-10-29 _chem_comp.pdbx_modified_date 2016-09-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 505.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5O8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5EI3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5O8 C4 C1 C 0 1 Y N N 5.288 -10.485 -4.538 2.805 -1.345 -0.139 C4 5O8 1 5O8 C5 C2 C 0 1 Y N N 4.702 -11.125 -5.621 3.549 -0.301 0.423 C5 5O8 2 5O8 C6 C3 C 0 1 N N N 3.341 -11.388 -5.629 4.960 -0.346 0.324 C6 5O8 3 5O8 C8 C4 C 0 1 Y N N 6.828 -10.905 -6.003 1.458 0.134 0.785 C8 5O8 4 5O8 N1 N1 N 0 1 N N N 2.583 -10.996 -4.527 5.526 -1.396 -0.312 N1 5O8 5 5O8 N2 N2 N 0 1 N N N 2.511 -9.976 -2.402 5.349 -3.436 -1.479 N2 5O8 6 5O8 N3 N3 N 0 1 N N N 4.543 -10.116 -3.487 3.436 -2.352 -0.754 N3 5O8 7 5O8 CAM C5 C 0 1 Y N N 7.127 -13.976 -7.751 2.125 3.703 0.301 CAM 5O8 8 5O8 CAK C6 C 0 1 Y N N 7.402 -15.327 -7.571 2.288 4.718 -0.622 CAK 5O8 9 5O8 CAJ C7 C 0 1 Y N N 6.382 -16.206 -7.223 3.530 4.949 -1.184 CAJ 5O8 10 5O8 CAL C8 C 0 1 Y N N 5.085 -15.735 -7.054 4.609 4.163 -0.823 CAL 5O8 11 5O8 CAN C9 C 0 1 Y N N 4.811 -14.384 -7.235 4.445 3.147 0.100 CAN 5O8 12 5O8 CAW C10 C 0 1 Y N N 5.831 -13.504 -7.583 3.204 2.917 0.662 CAW 5O8 13 5O8 CAQ C11 C 0 1 N N N 5.520 -12.022 -7.779 3.025 1.809 1.668 CAQ 5O8 14 5O8 N7 N4 N 1 1 Y N N 5.677 -11.354 -6.484 2.669 0.570 0.973 N7 5O8 15 5O8 O6 O1 O 0 1 N N N 2.815 -11.954 -6.585 5.648 0.542 0.799 O6 5O8 16 5O8 C2 C12 C 0 1 N N N 3.223 -10.355 -3.459 4.747 -2.382 -0.840 C2 5O8 17 5O8 N9 N5 N 0 1 Y N N 6.588 -10.368 -4.808 1.492 -1.049 0.107 N9 5O8 18 5O8 CBD C13 C 0 1 N N R 7.635 -9.754 -3.953 0.334 -1.852 -0.293 CBD 5O8 19 5O8 OAU O2 O 0 1 N N N 8.481 -10.845 -3.457 -0.846 -1.024 -0.382 OAU 5O8 20 5O8 CBB C14 C 0 1 N N R 7.149 -8.964 -2.774 0.001 -2.897 0.796 CBB 5O8 21 5O8 OAF O3 O 0 1 N N N 8.129 -7.986 -2.417 0.548 -4.171 0.451 OAF 5O8 22 5O8 CBA C15 C 0 1 N N S 7.094 -10.048 -1.698 -1.543 -2.953 0.803 CBA 5O8 23 5O8 OAE O4 O 0 1 N N N 7.439 -9.459 -0.463 -1.997 -4.265 0.462 OAE 5O8 24 5O8 CBC C16 C 0 1 N N R 8.207 -11.050 -2.052 -1.961 -1.937 -0.283 CBC 5O8 25 5O8 CAP C17 C 0 1 N N N 7.822 -12.542 -1.765 -3.225 -1.190 0.145 CAP 5O8 26 5O8 NAS N6 N 0 1 N N N 6.354 -12.665 -1.926 -3.628 -0.264 -0.916 NAS 5O8 27 5O8 SBH S1 S 0 1 N N N 5.875 -13.726 -3.100 -5.144 0.402 -0.902 SBH 5O8 28 5O8 OAC O5 O 0 1 N N N 6.876 -13.737 -4.217 -5.184 1.208 -2.072 OAC 5O8 29 5O8 OAD O6 O 0 1 N N N 4.527 -13.331 -3.626 -6.014 -0.711 -0.751 OAD 5O8 30 5O8 CBG C18 C 0 1 N N N 5.783 -15.375 -2.334 -5.170 1.438 0.586 CBG 5O8 31 5O8 FAH F1 F 0 1 N N N 6.982 -15.716 -1.872 -4.173 2.414 0.493 FAH 5O8 32 5O8 FAI F2 F 0 1 N N N 4.913 -15.348 -1.330 -6.419 2.058 0.701 FAI 5O8 33 5O8 FAG F3 F 0 1 N N N 5.388 -16.264 -3.240 -4.940 0.641 1.713 FAG 5O8 34 5O8 H1 H1 H 0 1 N N N 7.789 -10.964 -6.493 0.560 0.631 1.122 H1 5O8 35 5O8 H2 H2 H 0 1 N N N 1.599 -11.170 -4.499 6.491 -1.448 -0.392 H2 5O8 36 5O8 H3 H3 H 0 1 N N N 2.960 -9.516 -1.636 6.316 -3.472 -1.550 H3 5O8 37 5O8 H4 H4 H 0 1 N N N 1.527 -10.150 -2.373 4.808 -4.146 -1.860 H4 5O8 38 5O8 H5 H5 H 0 1 N N N 7.920 -13.294 -8.021 1.156 3.526 0.743 H5 5O8 39 5O8 H6 H6 H 0 1 N N N 8.409 -15.694 -7.702 1.445 5.332 -0.905 H6 5O8 40 5O8 H7 H7 H 0 1 N N N 6.598 -17.255 -7.084 3.657 5.742 -1.906 H7 5O8 41 5O8 H8 H8 H 0 1 N N N 4.292 -16.417 -6.783 5.579 4.343 -1.262 H8 5O8 42 5O8 H9 H9 H 0 1 N N N 3.804 -14.017 -7.105 5.288 2.534 0.383 H9 5O8 43 5O8 H10 H10 H 0 1 N N N 6.217 -11.587 -8.511 3.956 1.663 2.217 H10 5O8 44 5O8 H11 H11 H 0 1 N N N 4.488 -11.901 -8.139 2.231 2.076 2.365 H11 5O8 45 5O8 H12 H12 H 0 1 N N N 8.249 -9.091 -4.580 0.525 -2.344 -1.247 H12 5O8 46 5O8 H13 H13 H 0 1 N N N 6.155 -8.529 -2.956 0.378 -2.570 1.765 H13 5O8 47 5O8 H14 H14 H 0 1 N N N 7.821 -7.486 -1.670 0.369 -4.865 1.101 H14 5O8 48 5O8 H15 H15 H 0 1 N N N 6.111 -10.541 -1.680 -1.932 -2.656 1.777 H15 5O8 49 5O8 H16 H16 H 0 1 N N N 7.411 -10.117 0.221 -1.711 -4.952 1.079 H16 5O8 50 5O8 H17 H17 H 0 1 N N N 9.100 -10.805 -1.459 -2.124 -2.442 -1.235 H17 5O8 51 5O8 H18 H18 H 0 1 N N N 8.334 -13.205 -2.477 -4.027 -1.906 0.327 H18 5O8 52 5O8 H19 H19 H 0 1 N N N 8.111 -12.813 -0.739 -3.024 -0.630 1.059 H19 5O8 53 5O8 H20 H20 H 0 1 N N N 5.989 -11.762 -2.154 -3.007 -0.041 -1.627 H20 5O8 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5O8 CAQ CAW SING N N 1 5O8 CAQ N7 SING N N 2 5O8 CAM CAW DOUB Y N 3 5O8 CAM CAK SING Y N 4 5O8 CAW CAN SING Y N 5 5O8 CAK CAJ DOUB Y N 6 5O8 CAN CAL DOUB Y N 7 5O8 CAJ CAL SING Y N 8 5O8 O6 C6 DOUB N N 9 5O8 N7 C8 DOUB Y N 10 5O8 N7 C5 SING Y N 11 5O8 C8 N9 SING Y N 12 5O8 C6 C5 SING N N 13 5O8 C6 N1 SING N N 14 5O8 C5 C4 DOUB Y N 15 5O8 N9 C4 SING Y N 16 5O8 N9 CBD SING N N 17 5O8 C4 N3 SING N N 18 5O8 N1 C2 SING N N 19 5O8 OAC SBH DOUB N N 20 5O8 CBD OAU SING N N 21 5O8 CBD CBB SING N N 22 5O8 OAD SBH DOUB N N 23 5O8 N3 C2 DOUB N N 24 5O8 C2 N2 SING N N 25 5O8 OAU CBC SING N N 26 5O8 FAG CBG SING N N 27 5O8 SBH CBG SING N N 28 5O8 SBH NAS SING N N 29 5O8 CBB OAF SING N N 30 5O8 CBB CBA SING N N 31 5O8 CBG FAH SING N N 32 5O8 CBG FAI SING N N 33 5O8 CBC CAP SING N N 34 5O8 CBC CBA SING N N 35 5O8 NAS CAP SING N N 36 5O8 CBA OAE SING N N 37 5O8 C8 H1 SING N N 38 5O8 N1 H2 SING N N 39 5O8 N2 H3 SING N N 40 5O8 N2 H4 SING N N 41 5O8 CAM H5 SING N N 42 5O8 CAK H6 SING N N 43 5O8 CAJ H7 SING N N 44 5O8 CAL H8 SING N N 45 5O8 CAN H9 SING N N 46 5O8 CAQ H10 SING N N 47 5O8 CAQ H11 SING N N 48 5O8 CBD H12 SING N N 49 5O8 CBB H13 SING N N 50 5O8 OAF H14 SING N N 51 5O8 CBA H15 SING N N 52 5O8 OAE H16 SING N N 53 5O8 CBC H17 SING N N 54 5O8 CAP H18 SING N N 55 5O8 CAP H19 SING N N 56 5O8 NAS H20 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5O8 InChI InChI 1.03 "InChI=1S/C18H19F3N6O6S/c19-18(20,21)34(31,32)23-6-10-12(28)13(29)16(33-10)27-8-26(7-9-4-2-1-3-5-9)11-14(27)24-17(22)25-15(11)30/h1-5,8,10,12-13,16,23,28-29H,6-7H2,(H2-,22,24,25,30)/p+1/t10-,12-,13-,16-/m1/s1" 5O8 InChIKey InChI 1.03 NMFHLBUCTTXCHX-XNIJJKJLSA-O 5O8 SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(c[n+](Cc3ccccc3)c2C(=O)N1)[C@@H]4O[C@H](CN[S](=O)(=O)C(F)(F)F)[C@@H](O)[C@H]4O" 5O8 SMILES CACTVS 3.385 "NC1=Nc2n(c[n+](Cc3ccccc3)c2C(=O)N1)[CH]4O[CH](CN[S](=O)(=O)C(F)(F)F)[CH](O)[CH]4O" 5O8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1ccc(cc1)C[n+]2cn(c3c2C(=O)NC(=N3)N)[C@H]4[C@@H]([C@@H]([C@H](O4)CNS(=O)(=O)C(F)(F)F)O)O" 5O8 SMILES "OpenEye OEToolkits" 2.0.4 "c1ccc(cc1)C[n+]2cn(c3c2C(=O)NC(=N3)N)C4C(C(C(O4)CNS(=O)(=O)C(F)(F)F)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5O8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[2-azanyl-6-oxidanylidene-7-(phenylmethyl)-1~{H}-purin-7-ium-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-1,1,1-tris(fluoranyl)methanesulfonamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5O8 "Create component" 2015-10-29 EBI 5O8 "Initial release" 2016-09-07 RCSB #