data_5OP # _chem_comp.id 5OP _chem_comp.name "(5E,13E)-11-HYDROXY-9,15-DIOXOPROSTA-5,13-DIEN-1-OIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H30 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 15-OXO-PGE2 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-11-11 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 350.449 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5OP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1V3V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5OP C1 C1 C 0 1 N N N ? ? ? -1.064 8.264 0.031 C1 5OP 1 5OP C2 C2 C 0 1 N N N ? ? ? -0.319 7.018 -0.421 C2 5OP 2 5OP C3 C3 C 0 1 N N N -21.010 65.631 -2.920 -1.128 5.750 -0.146 C3 5OP 3 5OP C4 C4 C 0 1 N N N -19.675 65.414 -3.584 -0.358 4.498 -0.574 C4 5OP 4 5OP C5 C5 C 0 1 N N N -18.553 65.030 -2.942 -1.126 3.210 -0.284 C5 5OP 5 5OP C6 C6 C 0 1 N N N -17.278 64.841 -3.677 -0.354 1.972 -0.695 C6 5OP 6 5OP C7 C7 C 0 1 N N N -16.034 64.413 -2.893 -1.049 0.666 -0.523 C7 5OP 7 5OP C8 C8 C 0 1 N N N -16.224 63.066 -2.188 -0.447 -0.481 -0.864 C8 5OP 8 5OP C9 C9 C 0 1 N N N -14.969 62.662 -1.403 -1.092 -1.821 -0.722 C9 5OP 9 5OP C10 C10 C 0 1 N N N ? ? ? -0.330 -2.782 0.205 C10 5OP 10 5OP O1 O1 O 0 1 N N N ? ? ? 1.066 -2.813 -0.081 O1 5OP 11 5OP C11 C11 C 0 1 N N N ? ? ? -0.943 -4.151 -0.086 C11 5OP 12 5OP C12 C12 C 0 1 N N N ? ? ? -1.333 -4.024 -1.541 C12 5OP 13 5OP O2 O2 O 0 1 N N N ? ? ? -1.703 -4.970 -2.225 O2 5OP 14 5OP C13 C13 C 0 1 N N N -15.121 61.321 -0.683 -1.213 -2.598 -2.047 C13 5OP 15 5OP C14 C14 C 0 1 N N N -13.858 60.936 0.092 -2.412 -2.183 -2.883 C14 5OP 16 5OP C15 C15 C 0 1 N N N ? ? ? -2.378 -0.805 -3.487 C15 5OP 17 5OP C16 C16 C 0 1 N N N ? ? ? -1.290 -0.092 -3.817 C16 5OP 18 5OP C17 C17 C 0 1 N N N ? ? ? -1.346 1.277 -4.428 C17 5OP 19 5OP C18 C18 C 0 1 N N N ? ? ? -0.683 1.363 -5.810 C18 5OP 20 5OP C19 C19 C 0 1 N N N ? ? ? -0.719 2.763 -6.431 C19 5OP 21 5OP C20 C20 C 0 1 N N N ? ? ? -2.118 3.290 -6.666 C20 5OP 22 5OP O3 O3 O 0 1 N N N ? ? ? -2.158 4.647 -6.619 O3 5OP 23 5OP O4 O4 O 0 1 N N N -17.240 65.031 -4.850 0.784 2.051 -1.154 O4 5OP 24 5OP O5 O5 O 0 1 N N N ? ? ? -3.102 2.604 -6.909 O5 5OP 25 5OP H11 1H1 H 0 1 N N N ? ? ? -0.469 9.158 -0.177 H11 5OP 26 5OP H12 2H1 H 0 1 N N N ? ? ? -1.265 8.232 1.107 H12 5OP 27 5OP H13A 3H1 H 0 0 N N N ? ? ? -2.020 8.361 -0.494 H13A 5OP 28 5OP H21 1H2 H 0 1 N N N ? ? ? 0.644 6.966 0.101 H21 5OP 29 5OP H22 2H2 H 0 1 N N N ? ? ? -0.103 7.098 -1.493 H22 5OP 30 5OP H31 1H3 H 0 1 N N N -21.929 66.011 -3.390 -2.081 5.799 -0.686 H31 5OP 31 5OP H32 2H3 H 0 1 N N N -21.344 66.336 -2.144 -1.364 5.697 0.923 H32 5OP 32 5OP H41 1H4 H 0 1 N N N -19.857 64.622 -4.325 -0.163 4.549 -1.652 H41 5OP 33 5OP H42 2H4 H 0 1 N N N -19.412 66.442 -3.874 0.617 4.478 -0.072 H42 5OP 34 5OP H51 1H5 H 0 1 N N N -18.354 65.811 -2.194 -1.374 3.130 0.780 H51 5OP 35 5OP H52 2H5 H 0 1 N N N -18.797 64.013 -2.601 -2.082 3.216 -0.822 H52 5OP 36 5OP H7 H7 H 0 1 N N N -15.126 64.995 -2.843 -2.056 0.679 -0.118 H7 5OP 37 5OP H8 H8 H 0 1 N N N -17.127 62.476 -2.237 0.561 -0.477 -1.270 H8 5OP 38 5OP H9 H9 H 0 1 N N N -14.533 63.672 -1.391 -2.097 -1.667 -0.305 H9 5OP 39 5OP H10 H10 H 0 1 N N N ? ? ? -0.443 -2.511 1.260 H10 5OP 40 5OP HO1 HO1 H 0 1 N N N ? ? ? 1.446 -3.510 0.477 HO1 5OP 41 5OP H111 1H11 H 0 0 N N N ? ? ? -1.853 -4.312 0.498 H111 5OP 42 5OP H112 2H11 H 0 0 N N N ? ? ? -0.231 -4.969 0.046 H112 5OP 43 5OP H13 H13 H 0 1 N N N -16.175 61.634 -0.725 -0.293 -2.527 -2.638 H13 5OP 44 5OP H141 1H14 H 0 0 N N N -13.012 61.470 -0.366 -3.316 -2.258 -2.266 H141 5OP 45 5OP H142 2H14 H 0 0 N N N -14.047 61.207 1.141 -2.532 -2.904 -3.702 H142 5OP 46 5OP H15 H15 H 0 1 N N N ? ? ? -3.356 -0.365 -3.674 H15 5OP 47 5OP H16 H16 H 0 1 N N N ? ? ? -0.297 -0.497 -3.642 H16 5OP 48 5OP H171 1H17 H 0 0 N N N ? ? ? -0.828 1.968 -3.751 H171 5OP 49 5OP H172 2H17 H 0 0 N N N ? ? ? -2.381 1.635 -4.498 H172 5OP 50 5OP H181 1H18 H 0 0 N N N ? ? ? 0.369 1.080 -5.683 H181 5OP 51 5OP H182 2H18 H 0 0 N N N ? ? ? -1.125 0.622 -6.487 H182 5OP 52 5OP H191 1H19 H 0 0 N N N ? ? ? -0.231 2.731 -7.412 H191 5OP 53 5OP H192 2H19 H 0 0 N N N ? ? ? -0.164 3.462 -5.795 H192 5OP 54 5OP HO3 HO3 H 0 1 N N N ? ? ? -3.037 5.046 -6.794 HO3 5OP 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5OP C1 C2 SING N N 1 5OP C1 H11 SING N N 2 5OP C1 H12 SING N N 3 5OP C1 H13A SING N N 4 5OP C2 C3 SING N N 5 5OP C2 H21 SING N N 6 5OP C2 H22 SING N N 7 5OP C3 C4 SING N N 8 5OP C3 H31 SING N N 9 5OP C3 H32 SING N N 10 5OP C4 C5 SING N N 11 5OP C4 H41 SING N N 12 5OP C4 H42 SING N N 13 5OP C5 C6 SING N N 14 5OP C5 H51 SING N N 15 5OP C5 H52 SING N N 16 5OP C6 C7 SING N N 17 5OP C6 O4 DOUB N N 18 5OP C7 C8 DOUB N E 19 5OP C7 H7 SING N N 20 5OP C8 C9 SING N N 21 5OP C8 H8 SING N N 22 5OP C9 C10 SING N N 23 5OP C9 C13 SING N N 24 5OP C9 H9 SING N N 25 5OP C10 O1 SING N N 26 5OP C10 C11 SING N N 27 5OP C10 H10 SING N N 28 5OP O1 HO1 SING N N 29 5OP C11 C12 SING N N 30 5OP C11 H111 SING N N 31 5OP C11 H112 SING N N 32 5OP C12 O2 DOUB N N 33 5OP C12 C13 SING N N 34 5OP C13 C14 SING N N 35 5OP C13 H13 SING N N 36 5OP C14 C15 SING N N 37 5OP C14 H141 SING N N 38 5OP C14 H142 SING N N 39 5OP C15 C16 DOUB N N 40 5OP C15 H15 SING N N 41 5OP C16 C17 SING N N 42 5OP C16 H16 SING N N 43 5OP C17 C18 SING N N 44 5OP C17 H171 SING N N 45 5OP C17 H172 SING N N 46 5OP C18 C19 SING N N 47 5OP C18 H181 SING N N 48 5OP C18 H182 SING N N 49 5OP C19 C20 SING N N 50 5OP C19 H191 SING N N 51 5OP C19 H192 SING N N 52 5OP C20 O3 SING N N 53 5OP C20 O5 DOUB N N 54 5OP O3 HO3 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5OP SMILES ACDLabs 10.04 "O=C(O)CCC/C=C/CC1C(=O)CC(O)C1\C=C\C(=O)CCCCC" 5OP SMILES_CANONICAL CACTVS 3.341 "CCCCCC(=O)\C=C\[C@@H]1C(O)CC(=O)[C@H]1CC=CCCCC(O)=O" 5OP SMILES CACTVS 3.341 "CCCCCC(=O)C=C[CH]1C(O)CC(=O)[CH]1CC=CCCCC(O)=O" 5OP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCC(=O)\C=C\[C@@H]1[C@@H](CC(=O)[C@H]1CC=CCCCC(=O)O)O" 5OP SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCC(=O)C=CC1C(CC(=O)C1CC=CCCCC(=O)O)O" 5OP InChI InChI 1.03 "InChI=1S/C20H30O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,16-17,19,23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4?,13-12+" 5OP InChIKey InChI 1.03 YRTJDWROBKPZNV-SFTOQRQMSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5OP "SYSTEMATIC NAME" ACDLabs 10.04 "(8beta,13E)-11-hydroxy-9,15-dioxoprosta-5,13-dien-1-oic acid" 5OP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "7-[(1S,2S,3R)-3-hydroxy-5-oxo-2-[(E)-3-oxooct-1-enyl]cyclopentyl]hept-5-enoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5OP "Create component" 2003-11-11 RCSB 5OP "Modify descriptor" 2011-06-04 RCSB 5OP "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 5OP _pdbx_chem_comp_synonyms.name 15-OXO-PGE2 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##