data_5WI # _chem_comp.id 5WI _chem_comp.name "(3S,6Z)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]piperazine-2,5-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H20 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-24 _chem_comp.pdbx_modified_date 2023-02-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 256.298 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5WI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7V3E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5WI C1 C1 C 0 1 N N S 19.065 34.901 162.944 2.101 -0.047 0.825 C1 5WI 1 5WI C2 C2 C 0 1 N N N 18.068 33.845 163.471 0.944 0.813 1.227 C2 5WI 2 5WI C4 C3 C 0 1 N N N 17.678 33.042 161.194 -0.629 -0.793 0.456 C4 5WI 3 5WI C5 C4 C 0 1 N N N 19.011 33.512 160.812 0.444 -1.810 0.411 C5 5WI 4 5WI C9 C5 C 0 1 N N N 17.041 32.252 160.310 -1.844 -1.056 -0.031 C9 5WI 5 5WI C10 C6 C 0 1 N N S 18.396 36.168 162.450 2.702 0.505 -0.469 C10 5WI 6 5WI C11 C7 C 0 1 N N R 15.771 31.506 160.718 -2.873 0.042 -0.122 C11 5WI 7 5WI C12 C8 C 0 1 N N N 14.620 32.513 160.767 -3.602 -0.052 -1.464 C12 5WI 8 5WI C14 C9 C 0 1 N N N 15.478 30.425 159.690 -3.882 -0.110 1.018 C14 5WI 9 5WI C16 C10 C 0 1 N N N 16.891 36.264 162.741 3.180 1.940 -0.238 C16 5WI 10 5WI C17 C11 C 0 1 N N N 19.112 37.387 163.049 3.887 -0.365 -0.892 C17 5WI 11 5WI C18 C12 C 0 1 N N N 20.543 37.420 162.534 4.410 0.111 -2.249 C18 5WI 12 5WI N3 N1 N 0 1 N N N 17.402 32.947 162.549 -0.335 0.455 1.026 N3 5WI 13 5WI N6 N2 N 0 1 N N N 19.736 34.427 161.714 1.718 -1.435 0.609 N6 5WI 14 5WI O7 O1 O 0 1 N N N 19.508 33.137 159.814 0.174 -2.976 0.195 O7 5WI 15 5WI O8 O2 O 0 1 N N N 17.849 33.770 164.631 1.171 1.880 1.757 O8 5WI 16 5WI O13 O3 O 0 1 N N N 13.424 31.905 160.348 -4.577 0.989 -1.550 O13 5WI 17 5WI O15 O4 O 0 1 N N N 15.961 30.931 161.985 -2.225 1.311 -0.019 O15 5WI 18 5WI H1 H1 H 0 1 N N N 19.803 35.140 163.724 2.857 -0.009 1.609 H1 5WI 19 5WI H3 H3 H 0 1 N N N 17.429 32.145 159.308 -2.090 -2.055 -0.361 H3 5WI 20 5WI H5 H5 H 0 1 N N N 18.525 36.212 161.358 1.946 0.495 -1.254 H5 5WI 21 5WI H6 H6 H 0 1 N N N 14.849 33.359 160.103 -2.882 0.056 -2.276 H6 5WI 22 5WI H7 H7 H 0 1 N N N 14.500 32.878 161.798 -4.095 -1.020 -1.543 H7 5WI 23 5WI H8 H8 H 0 1 N N N 14.565 29.883 159.977 -3.363 -0.043 1.974 H8 5WI 24 5WI H9 H9 H 0 1 N N N 15.335 30.888 158.702 -4.626 0.684 0.952 H9 5WI 25 5WI H10 H10 H 0 1 N N N 16.323 29.722 159.647 -4.376 -1.078 0.939 H10 5WI 26 5WI H11 H11 H 0 1 N N N 16.500 37.213 162.346 3.608 2.333 -1.160 H11 5WI 27 5WI H12 H12 H 0 1 N N N 16.370 35.424 162.258 2.335 2.559 0.064 H12 5WI 28 5WI H13 H13 H 0 1 N N N 16.724 36.223 163.828 3.936 1.949 0.547 H13 5WI 29 5WI H14 H14 H 0 1 N N N 18.590 38.307 162.748 4.681 -0.285 -0.149 H14 5WI 30 5WI H15 H15 H 0 1 N N N 19.116 37.310 164.146 3.566 -1.404 -0.971 H15 5WI 31 5WI H16 H16 H 0 1 N N N 21.066 38.290 162.957 3.617 0.031 -2.992 H16 5WI 32 5WI H17 H17 H 0 1 N N N 21.062 36.498 162.835 4.732 1.149 -2.171 H17 5WI 33 5WI H18 H18 H 0 1 N N N 20.536 37.495 161.437 5.255 -0.509 -2.551 H18 5WI 34 5WI H19 H19 H 0 1 N N N 16.751 32.267 162.886 -1.053 1.058 1.274 H19 5WI 35 5WI H20 H20 H 0 1 N N N 20.667 34.722 161.497 2.410 -2.115 0.609 H20 5WI 36 5WI H21 H21 H 0 1 N N N 12.717 32.539 160.382 -5.078 0.991 -2.377 H21 5WI 37 5WI H22 H22 H 0 1 N N N 16.143 31.614 162.619 -1.638 1.515 -0.760 H22 5WI 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5WI C14 C11 SING N N 1 5WI O7 C5 DOUB N N 2 5WI C9 C11 SING N N 3 5WI C9 C4 DOUB N Z 4 5WI O13 C12 SING N N 5 5WI C11 C12 SING N N 6 5WI C11 O15 SING N N 7 5WI C5 C4 SING N N 8 5WI C5 N6 SING N N 9 5WI C4 N3 SING N N 10 5WI N6 C1 SING N N 11 5WI C10 C16 SING N N 12 5WI C10 C1 SING N N 13 5WI C10 C17 SING N N 14 5WI C18 C17 SING N N 15 5WI N3 C2 SING N N 16 5WI C1 C2 SING N N 17 5WI C2 O8 DOUB N N 18 5WI C1 H1 SING N N 19 5WI C9 H3 SING N N 20 5WI C10 H5 SING N N 21 5WI C12 H6 SING N N 22 5WI C12 H7 SING N N 23 5WI C14 H8 SING N N 24 5WI C14 H9 SING N N 25 5WI C14 H10 SING N N 26 5WI C16 H11 SING N N 27 5WI C16 H12 SING N N 28 5WI C16 H13 SING N N 29 5WI C17 H14 SING N N 30 5WI C17 H15 SING N N 31 5WI C18 H16 SING N N 32 5WI C18 H17 SING N N 33 5WI C18 H18 SING N N 34 5WI N3 H19 SING N N 35 5WI N6 H20 SING N N 36 5WI O13 H21 SING N N 37 5WI O15 H22 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5WI InChI InChI 1.03 "InChI=1S/C12H20N2O4/c1-4-7(2)9-11(17)13-8(10(16)14-9)5-12(3,18)6-15/h5,7,9,15,18H,4,6H2,1-3H3,(H,13,17)(H,14,16)/b8-5-/t7-,9-,12+/m0/s1" 5WI InChIKey InChI 1.03 KGPSCQPJVWXIGR-PMSMWWAASA-N 5WI SMILES_CANONICAL CACTVS 3.385 "CC[C@H](C)[C@@H]1NC(=O)/C(NC1=O)=C/[C@@](C)(O)CO" 5WI SMILES CACTVS 3.385 "CC[CH](C)[CH]1NC(=O)C(NC1=O)=C[C](C)(O)CO" 5WI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H](C)[C@H]1C(=O)N/C(=C\[C@](C)(CO)O)/C(=O)N1" 5WI SMILES "OpenEye OEToolkits" 2.0.7 "CCC(C)C1C(=O)NC(=CC(C)(CO)O)C(=O)N1" # _pdbx_chem_comp_identifier.comp_id 5WI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},6~{Z})-3-[(2~{S})-butan-2-yl]-6-[(2~{R})-2-methyl-2,3-bis(oxidanyl)propylidene]piperazine-2,5-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5WI "Create component" 2021-08-24 PDBJ 5WI "Initial release" 2023-02-15 RCSB #