data_5Y6 # _chem_comp.id 5Y6 _chem_comp.name "8-[3-chloranyl-5-[1-methyl-2,2-bis(oxidanylidene)-3~{H}-2,1-benzothiazol-5-yl]pyridin-4-yl]-1-oxa-3,8-diazaspiro[4.5]decan-2-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 Cl N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-01-05 _chem_comp.pdbx_modified_date 2016-01-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 448.923 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5Y6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5HBE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5Y6 C2 C1 C 0 1 N N N -3.892 16.501 -14.266 4.723 -3.424 0.159 C2 5Y6 1 5Y6 C4 C2 C 0 1 N N N -3.347 15.232 -12.432 4.636 -1.137 0.159 C4 5Y6 2 5Y6 C5 C3 C 0 1 N N N -4.692 14.785 -13.038 3.217 -1.719 0.061 C5 5Y6 3 5Y6 C6 C4 C 0 1 N N N -4.588 13.397 -13.665 2.384 -1.281 1.262 C6 5Y6 4 5Y6 C7 C5 C 0 1 N N N -4.505 12.285 -12.613 2.182 0.236 1.212 C7 5Y6 5 5Y6 C11 C6 C 0 1 Y N N -6.308 11.315 -11.169 1.192 1.953 -0.066 C11 5Y6 6 5Y6 C12 C7 C 0 1 Y N N -7.174 10.627 -12.037 2.180 2.930 0.044 C12 5Y6 7 5Y6 C16 C8 C 0 1 Y N N -6.951 9.720 -9.445 -0.419 3.734 -0.219 C16 5Y6 8 5Y6 C17 C9 C 0 1 Y N N -6.205 10.828 -9.833 -0.142 2.371 -0.200 C17 5Y6 9 5Y6 C18 C10 C 0 1 Y N N -5.319 11.477 -8.844 -1.236 1.377 -0.321 C18 5Y6 10 5Y6 C19 C11 C 0 1 Y N N -3.951 11.510 -9.081 -2.366 1.473 0.482 C19 5Y6 11 5Y6 C21 C12 C 0 1 N N N -1.589 12.218 -8.341 -4.683 0.520 1.179 C21 5Y6 12 5Y6 C27 C13 C 0 1 Y N N -3.567 12.723 -7.035 -3.312 -0.490 -0.535 C27 5Y6 13 5Y6 O1 O1 O 0 1 N N N -3.819 17.300 -15.175 5.170 -4.554 0.181 O1 5Y6 14 5Y6 N3 N1 N 0 1 N N N -2.907 16.264 -13.382 5.496 -2.330 0.214 N3 5Y6 15 5Y6 N8 N2 N 0 1 N N N -5.560 12.423 -11.593 1.519 0.601 -0.047 N8 5Y6 16 5Y6 C9 C14 C 0 1 N N N -5.741 13.745 -10.971 2.346 0.243 -1.207 C9 5Y6 17 5Y6 C10 C15 C 0 1 N N N -5.825 14.855 -12.021 2.553 -1.273 -1.238 C10 5Y6 18 5Y6 CL CL1 CL 0 0 N N N -7.419 11.089 -13.694 3.848 2.479 0.212 CL13 5Y6 19 5Y6 C14 C16 C 0 1 Y N N -7.874 9.534 -11.554 1.816 4.261 0.016 C14 5Y6 20 5Y6 N15 N3 N 0 1 Y N N -7.751 9.114 -10.303 0.552 4.620 -0.112 N15 5Y6 21 5Y6 C20 C17 C 0 1 Y N N -3.092 12.122 -8.189 -3.393 0.546 0.373 C20 5Y6 22 5Y6 S22 S1 S 0 1 N N N -1.209 13.449 -7.067 -5.535 -0.951 0.510 S22 5Y6 23 5Y6 O23 O2 O 0 1 N N N -0.166 13.003 -6.220 -5.573 -2.007 1.460 O23 5Y6 24 5Y6 O24 O3 O 0 1 N N N -1.235 14.752 -7.624 -6.677 -0.588 -0.254 O24 5Y6 25 5Y6 N25 N4 N 0 1 N N N -2.621 13.332 -6.201 -4.380 -1.397 -0.600 N25 5Y6 26 5Y6 C26 C18 C 0 1 N N N -2.836 13.821 -4.840 -4.467 -2.547 -1.503 C26 5Y6 27 5Y6 C28 C19 C 0 1 Y N N -4.964 12.695 -6.802 -2.164 -0.576 -1.349 C28 5Y6 28 5Y6 C29 C20 C 0 1 Y N N -5.824 12.086 -7.690 -1.147 0.337 -1.245 C29 5Y6 29 5Y6 O30 O4 O 0 1 N N N -4.979 15.766 -14.064 3.414 -3.157 0.070 O30 5Y6 30 5Y6 H1 H1 H 0 1 N N N -2.632 14.398 -12.390 4.867 -0.538 -0.722 H1 5Y6 31 5Y6 H2 H2 H 0 1 N N N -3.483 15.650 -11.424 4.745 -0.541 1.065 H2 5Y6 32 5Y6 H3 H3 H 0 1 N N N -5.476 13.225 -14.291 1.414 -1.778 1.232 H3 5Y6 33 5Y6 H4 H4 H 0 1 N N N -3.684 13.359 -14.291 2.902 -1.549 2.182 H4 5Y6 34 5Y6 H5 H5 H 0 1 N N N -4.617 11.312 -13.113 1.561 0.548 2.052 H5 5Y6 35 5Y6 H6 H6 H 0 1 N N N -3.523 12.333 -12.120 3.150 0.734 1.270 H6 5Y6 36 5Y6 H7 H7 H 0 1 N N N -6.875 9.352 -8.432 -1.440 4.071 -0.322 H7 5Y6 37 5Y6 H8 H8 H 0 1 N N N -3.554 11.051 -9.974 -2.447 2.277 1.198 H8 5Y6 38 5Y6 H9 H9 H 0 1 N N N -1.097 11.256 -8.136 -4.474 0.396 2.242 H9 5Y6 39 5Y6 H10 H10 H 0 1 N N N -1.303 12.569 -9.344 -5.269 1.422 1.001 H10 5Y6 40 5Y6 H11 H11 H 0 1 N N N -2.016 16.718 -13.372 6.464 -2.326 0.280 H11 5Y6 41 5Y6 H12 H12 H 0 1 N N N -4.888 13.946 -10.306 1.845 0.560 -2.122 H12 5Y6 42 5Y6 H13 H13 H 0 1 N N N -6.671 13.739 -10.383 3.313 0.741 -1.132 H13 5Y6 43 5Y6 H14 H14 H 0 1 N N N -5.780 15.828 -11.510 3.192 -1.536 -2.082 H14 5Y6 44 5Y6 H15 H15 H 0 1 N N N -6.783 14.764 -12.554 1.589 -1.770 -1.343 H15 5Y6 45 5Y6 H16 H16 H 0 1 N N N -8.542 9.007 -12.219 2.578 5.022 0.100 H16 5Y6 46 5Y6 H17 H17 H 0 1 N N N -1.912 14.285 -4.466 -3.570 -2.592 -2.120 H17 5Y6 47 5Y6 H18 H18 H 0 1 N N N -3.646 14.566 -4.842 -4.552 -3.463 -0.918 H18 5Y6 48 5Y6 H19 H19 H 0 1 N N N -3.113 12.980 -4.188 -5.343 -2.442 -2.142 H19 5Y6 49 5Y6 H20 H20 H 0 1 N N N -5.362 13.159 -5.912 -2.084 -1.377 -2.069 H20 5Y6 50 5Y6 H21 H21 H 0 1 N N N -6.886 12.079 -7.495 -0.277 0.251 -1.880 H21 5Y6 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5Y6 O1 C2 DOUB N N 1 5Y6 C2 O30 SING N N 2 5Y6 C2 N3 SING N N 3 5Y6 O30 C5 SING N N 4 5Y6 CL C12 SING N N 5 5Y6 C6 C5 SING N N 6 5Y6 C6 C7 SING N N 7 5Y6 N3 C4 SING N N 8 5Y6 C5 C4 SING N N 9 5Y6 C5 C10 SING N N 10 5Y6 C7 N8 SING N N 11 5Y6 C12 C14 DOUB Y N 12 5Y6 C12 C11 SING Y N 13 5Y6 C10 C9 SING N N 14 5Y6 N8 C11 SING N N 15 5Y6 N8 C9 SING N N 16 5Y6 C14 N15 SING Y N 17 5Y6 C11 C17 DOUB Y N 18 5Y6 N15 C16 DOUB Y N 19 5Y6 C17 C16 SING Y N 20 5Y6 C17 C18 SING N N 21 5Y6 C19 C18 DOUB Y N 22 5Y6 C19 C20 SING Y N 23 5Y6 C18 C29 SING Y N 24 5Y6 C21 C20 SING N N 25 5Y6 C21 S22 SING N N 26 5Y6 C20 C27 DOUB Y N 27 5Y6 C29 C28 DOUB Y N 28 5Y6 O24 S22 DOUB N N 29 5Y6 S22 O23 DOUB N N 30 5Y6 S22 N25 SING N N 31 5Y6 C27 C28 SING Y N 32 5Y6 C27 N25 SING N N 33 5Y6 N25 C26 SING N N 34 5Y6 C4 H1 SING N N 35 5Y6 C4 H2 SING N N 36 5Y6 C6 H3 SING N N 37 5Y6 C6 H4 SING N N 38 5Y6 C7 H5 SING N N 39 5Y6 C7 H6 SING N N 40 5Y6 C16 H7 SING N N 41 5Y6 C19 H8 SING N N 42 5Y6 C21 H9 SING N N 43 5Y6 C21 H10 SING N N 44 5Y6 N3 H11 SING N N 45 5Y6 C9 H12 SING N N 46 5Y6 C9 H13 SING N N 47 5Y6 C10 H14 SING N N 48 5Y6 C10 H15 SING N N 49 5Y6 C14 H16 SING N N 50 5Y6 C26 H17 SING N N 51 5Y6 C26 H18 SING N N 52 5Y6 C26 H19 SING N N 53 5Y6 C28 H20 SING N N 54 5Y6 C29 H21 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5Y6 InChI InChI 1.03 "InChI=1S/C20H21ClN4O4S/c1-24-17-3-2-13(8-14(17)11-30(24,27)28)15-9-22-10-16(21)18(15)25-6-4-20(5-7-25)12-23-19(26)29-20/h2-3,8-10H,4-7,11-12H2,1H3,(H,23,26)" 5Y6 InChIKey InChI 1.03 ZNMSRFYDOSAZLZ-UHFFFAOYSA-N 5Y6 SMILES_CANONICAL CACTVS 3.385 "CN1c2ccc(cc2C[S]1(=O)=O)c3cncc(Cl)c3N4CCC5(CC4)CNC(=O)O5" 5Y6 SMILES CACTVS 3.385 "CN1c2ccc(cc2C[S]1(=O)=O)c3cncc(Cl)c3N4CCC5(CC4)CNC(=O)O5" 5Y6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CN1c2ccc(cc2CS1(=O)=O)c3cncc(c3N4CCC5(CC4)CNC(=O)O5)Cl" 5Y6 SMILES "OpenEye OEToolkits" 2.0.4 "CN1c2ccc(cc2CS1(=O)=O)c3cncc(c3N4CCC5(CC4)CNC(=O)O5)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5Y6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "8-[3-chloranyl-5-[1-methyl-2,2-bis(oxidanylidene)-3~{H}-2,1-benzothiazol-5-yl]pyridin-4-yl]-1-oxa-3,8-diazaspiro[4.5]decan-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5Y6 "Create component" 2016-01-05 EBI 5Y6 "Initial release" 2016-02-03 RCSB #