data_5YF # _chem_comp.id 5YF _chem_comp.name "7-[(4-fluoranylphenoxy)methyl]-3-[(1~{S},2~{S})-2-(hydroxymethyl)cyclopropyl]-2-methyl-[1,3]thiazolo[3,2-a]pyrimidin-5-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 F N2 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-01-05 _chem_comp.pdbx_modified_date 2016-02-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 360.403 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5YF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5H8R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5YF C4 C1 C 0 1 N N N 14.310 -14.020 -26.711 -0.188 1.002 -0.964 C4 5YF 1 5YF C14 C2 C 0 1 N N S 16.306 -9.831 -27.261 -4.435 0.230 -0.342 C14 5YF 2 5YF C5 C3 C 0 1 N N N 15.128 -14.814 -25.972 0.676 -0.056 -0.783 C5 5YF 3 5YF C6 C4 C 0 1 N N N 16.858 -13.307 -26.143 -1.110 -1.425 -0.266 C6 5YF 4 5YF C11 C5 C 0 1 Y N N 11.590 -14.391 -21.905 6.935 0.335 0.287 C11 5YF 5 5YF C7 C6 C 0 1 N N N 14.725 -16.158 -25.469 2.160 0.129 -0.972 C7 5YF 6 5YF C8 C7 C 0 1 Y N N 12.763 -15.563 -24.074 4.180 0.067 0.280 C8 5YF 7 5YF C9 C8 C 0 1 Y N N 11.454 -15.884 -23.741 4.892 -0.108 1.457 C9 5YF 8 5YF C10 C9 C 0 1 Y N N 10.851 -15.282 -22.647 6.267 0.026 1.459 C10 5YF 9 5YF C12 C10 C 0 1 Y N N 12.879 -14.049 -22.215 6.225 0.516 -0.889 C12 5YF 10 5YF C13 C11 C 0 1 Y N N 13.469 -14.637 -23.320 4.850 0.382 -0.893 C13 5YF 11 5YF N1 N1 N 0 1 N N N 16.429 -14.453 -25.675 0.185 -1.240 -0.438 N1 5YF 12 5YF C3 C12 C 0 1 N N N 14.762 -12.756 -27.215 -1.558 0.806 -0.777 C3 5YF 13 5YF F F1 F 0 1 N N N 11.023 -13.823 -20.806 8.279 0.467 0.290 F 5YF 14 5YF O1 O1 O 0 1 N N N 13.321 -16.255 -25.129 2.827 -0.065 0.276 O1 5YF 15 5YF O O2 O 0 1 N N N 14.118 -12.064 -27.978 -2.336 1.735 -0.925 O 5YF 16 5YF S S1 S 0 1 N N N 18.507 -12.788 -25.937 -2.040 -2.865 0.185 S 5YF 17 5YF C1 C13 C 0 1 N N N 18.187 -11.319 -26.811 -3.603 -2.030 0.148 C1 5YF 18 5YF C C14 C 0 1 N N N 19.350 -10.433 -27.168 -4.960 -2.619 0.438 C 5YF 19 5YF N N2 N 0 1 N N N 16.121 -12.382 -26.865 -2.023 -0.426 -0.418 N 5YF 20 5YF C2 C15 C 0 1 N N N 16.892 -11.215 -27.146 -3.330 -0.783 -0.196 C2 5YF 21 5YF C16 C16 C 0 1 N N S 15.042 -9.513 -28.023 -4.434 1.421 0.618 C16 5YF 22 5YF C15 C17 C 0 1 N N N 16.351 -8.978 -28.498 -5.474 0.309 0.778 C15 5YF 23 5YF C17 C18 C 0 1 N N N 13.992 -8.591 -27.433 -4.917 2.767 0.075 C17 5YF 24 5YF O2 O3 O 0 1 N N N 12.917 -9.323 -26.841 -4.736 3.775 1.072 O2 5YF 25 5YF H1 H1 H 0 1 N N N 13.302 -14.346 -26.922 0.190 1.974 -1.244 H1 5YF 26 5YF H2 H2 H 0 1 N N N 16.404 -9.247 -26.334 -4.780 0.406 -1.361 H2 5YF 27 5YF H3 H3 H 0 1 N N N 14.946 -16.901 -26.249 2.527 -0.597 -1.697 H3 5YF 28 5YF H4 H4 H 0 1 N N N 15.317 -16.384 -24.570 2.356 1.137 -1.337 H4 5YF 29 5YF H5 H5 H 0 1 N N N 10.906 -16.602 -24.333 4.372 -0.353 2.372 H5 5YF 30 5YF H6 H6 H 0 1 N N N 9.828 -15.507 -22.385 6.821 -0.110 2.376 H6 5YF 31 5YF H7 H7 H 0 1 N N N 13.422 -13.337 -21.611 6.747 0.761 -1.802 H7 5YF 32 5YF H8 H8 H 0 1 N N N 14.480 -14.375 -23.596 4.297 0.518 -1.811 H8 5YF 33 5YF H10 H10 H 0 1 N N N 20.282 -10.883 -26.796 -4.852 -3.675 0.685 H10 5YF 34 5YF H11 H11 H 0 1 N N N 19.406 -10.325 -28.261 -5.412 -2.094 1.279 H11 5YF 35 5YF H12 H12 H 0 1 N N N 19.211 -9.443 -26.708 -5.596 -2.515 -0.441 H12 5YF 36 5YF H13 H13 H 0 1 N N N 14.638 -10.348 -28.614 -3.633 1.471 1.356 H13 5YF 37 5YF H14 H14 H 0 1 N N N 16.803 -9.372 -29.420 -6.502 0.537 0.496 H14 5YF 38 5YF H15 H15 H 0 1 N N N 16.567 -7.903 -28.415 -5.358 -0.372 1.621 H15 5YF 39 5YF H16 H16 H 0 1 N N N 14.462 -7.963 -26.662 -4.343 3.027 -0.814 H16 5YF 40 5YF H17 H17 H 0 1 N N N 13.590 -7.951 -28.232 -5.974 2.697 -0.183 H17 5YF 41 5YF H18 H18 H 0 1 N N N 12.280 -8.716 -26.483 -5.022 4.657 0.796 H18 5YF 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5YF C15 C16 SING N N 1 5YF C15 C14 SING N N 2 5YF C16 C17 SING N N 3 5YF C16 C14 SING N N 4 5YF O C3 DOUB N N 5 5YF C17 O2 SING N N 6 5YF C14 C2 SING N N 7 5YF C3 N SING N N 8 5YF C3 C4 SING N N 9 5YF C C1 SING N N 10 5YF C2 N SING N N 11 5YF C2 C1 DOUB N N 12 5YF N C6 SING N N 13 5YF C1 S SING N N 14 5YF C4 C5 DOUB N N 15 5YF C6 S SING N N 16 5YF C6 N1 DOUB N N 17 5YF C5 N1 SING N N 18 5YF C5 C7 SING N N 19 5YF C7 O1 SING N N 20 5YF O1 C8 SING N N 21 5YF C8 C9 DOUB Y N 22 5YF C8 C13 SING Y N 23 5YF C9 C10 SING Y N 24 5YF C13 C12 DOUB Y N 25 5YF C10 C11 DOUB Y N 26 5YF C12 C11 SING Y N 27 5YF C11 F SING N N 28 5YF C4 H1 SING N N 29 5YF C14 H2 SING N N 30 5YF C7 H3 SING N N 31 5YF C7 H4 SING N N 32 5YF C9 H5 SING N N 33 5YF C10 H6 SING N N 34 5YF C12 H7 SING N N 35 5YF C13 H8 SING N N 36 5YF C H10 SING N N 37 5YF C H11 SING N N 38 5YF C H12 SING N N 39 5YF C16 H13 SING N N 40 5YF C15 H14 SING N N 41 5YF C15 H15 SING N N 42 5YF C17 H16 SING N N 43 5YF C17 H17 SING N N 44 5YF O2 H18 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5YF InChI InChI 1.03 "InChI=1S/C18H17FN2O3S/c1-10-17(15-6-11(15)8-22)21-16(23)7-13(20-18(21)25-10)9-24-14-4-2-12(19)3-5-14/h2-5,7,11,15,22H,6,8-9H2,1H3/t11-,15+/m1/s1" 5YF InChIKey InChI 1.03 CJDCZVBFZVDWJU-ABAIWWIYSA-N 5YF SMILES_CANONICAL CACTVS 3.385 "CC1=C([C@H]2C[C@@H]2CO)N3C(=O)C=C(COc4ccc(F)cc4)N=C3S1" 5YF SMILES CACTVS 3.385 "CC1=C([CH]2C[CH]2CO)N3C(=O)C=C(COc4ccc(F)cc4)N=C3S1" 5YF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CC1=C(N2C(=O)C=C(N=C2S1)COc3ccc(cc3)F)[C@H]4C[C@@H]4CO" 5YF SMILES "OpenEye OEToolkits" 2.0.4 "CC1=C(N2C(=O)C=C(N=C2S1)COc3ccc(cc3)F)C4CC4CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5YF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "7-[(4-fluoranylphenoxy)methyl]-3-[(1~{S},2~{S})-2-(hydroxymethyl)cyclopropyl]-2-methyl-[1,3]thiazolo[3,2-a]pyrimidin-5-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5YF "Create component" 2016-01-05 RCSB 5YF "Initial release" 2016-02-24 RCSB #