data_5YG
#
_chem_comp.id 5YG
_chem_comp.name "~{N}-[(4-methoxyphenyl)methyl]-4-(pyridin-4-ylmethyl)aniline"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H20 N2 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-07-15
_chem_comp.pdbx_modified_date 2022-11-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 304.386
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5YG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7P5T
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5YG C01 C1 C 0 1 N N N -24.077 -1.927 -8.541 7.760 1.840 0.498 C01 5YG 1
5YG C04 C2 C 0 1 Y N N -25.599 0.664 -10.594 5.582 -1.051 -0.067 C04 5YG 2
5YG C05 C3 C 0 1 Y N N -25.213 1.740 -11.378 4.256 -1.280 -0.380 C05 5YG 3
5YG C06 C4 C 0 1 Y N N -23.880 2.138 -11.395 3.394 -0.214 -0.561 C06 5YG 4
5YG C07 C5 C 0 1 N N N -23.463 3.334 -12.248 1.948 -0.467 -0.902 C07 5YG 5
5YG C09 C6 C 0 1 Y N N -21.949 3.797 -14.213 -0.209 -0.808 0.270 C09 5YG 6
5YG C11 C7 C 0 1 Y N N -20.810 5.884 -14.230 -2.312 -1.141 1.374 C11 5YG 7
5YG C13 C8 C 0 1 N N N -18.797 6.367 -15.597 -4.417 -1.537 0.080 C13 5YG 8
5YG C14 C9 C 0 1 Y N N -19.025 7.331 -16.741 -5.148 -0.222 0.014 C14 5YG 9
5YG C15 C10 C 0 1 Y N N -17.897 7.796 -17.387 -5.435 0.371 -1.206 C15 5YG 10
5YG C16 C11 C 0 1 Y N N -18.065 8.693 -18.434 -6.108 1.578 -1.226 C16 5YG 11
5YG C18 C12 C 0 1 Y N N -20.353 8.654 -18.206 -6.226 1.627 1.074 C18 5YG 12
5YG C19 C13 C 0 1 Y N N -20.277 7.772 -17.128 -5.557 0.422 1.173 C19 5YG 13
5YG C21 C14 C 0 1 Y N N -21.064 3.304 -15.174 -0.837 -0.946 -0.962 C21 5YG 14
5YG C22 C15 C 0 1 Y N N -22.949 1.446 -10.620 3.856 1.082 -0.430 C22 5YG 15
5YG C03 C16 C 0 1 Y N N -24.669 -0.032 -9.830 6.048 0.249 0.065 C03 5YG 16
5YG C10 C17 C 0 1 Y N N -21.814 5.085 -13.753 -0.952 -0.909 1.439 C10 5YG 17
5YG C12 C18 C 0 1 Y N N -19.921 5.433 -15.194 -2.932 -1.284 0.147 C12 5YG 18
5YG C20 C19 C 0 1 Y N N -20.047 4.127 -15.680 -2.196 -1.184 -1.020 C20 5YG 19
5YG C23 C20 C 0 1 Y N N -23.343 0.368 -9.832 5.181 1.316 -0.118 C23 5YG 20
5YG N08 N1 N 0 1 N N N -23.019 3.002 -13.613 1.166 -0.573 0.332 N08 5YG 21
5YG N17 N2 N 0 1 Y N N -19.265 9.096 -18.841 -6.477 2.164 -0.104 N17 5YG 22
5YG O02 O1 O 0 1 N N N -25.104 -1.124 -9.056 7.351 0.477 0.378 O02 5YG 23
5YG H1 H1 H 0 1 N N N -24.513 -2.749 -7.954 7.593 2.355 -0.449 H1 5YG 24
5YG H2 H2 H 0 1 N N N -23.486 -2.342 -9.370 7.181 2.326 1.283 H2 5YG 25
5YG H3 H3 H 0 1 N N N -23.426 -1.320 -7.895 8.820 1.881 0.750 H3 5YG 26
5YG H4 H4 H 0 1 N N N -26.636 0.362 -10.576 6.254 -1.883 0.079 H4 5YG 27
5YG H5 H5 H 0 1 N N N -25.944 2.267 -11.973 3.893 -2.292 -0.483 H5 5YG 28
5YG H6 H6 H 0 1 N N N -22.636 3.846 -11.735 1.567 0.358 -1.504 H6 5YG 29
5YG H7 H7 H 0 1 N N N -24.324 4.014 -12.325 1.864 -1.396 -1.466 H7 5YG 30
5YG H8 H8 H 0 1 N N N -20.708 6.889 -13.847 -2.890 -1.220 2.283 H8 5YG 31
5YG H9 H9 H 0 1 N N N -17.937 5.738 -15.870 -4.732 -2.085 0.967 H9 5YG 32
5YG H10 H10 H 0 1 N N N -18.544 6.969 -14.712 -4.645 -2.125 -0.810 H10 5YG 33
5YG H11 H11 H 0 1 N N N -16.912 7.471 -17.087 -5.135 -0.103 -2.128 H11 5YG 34
5YG H12 H12 H 0 1 N N N -17.189 9.077 -18.936 -6.335 2.047 -2.173 H12 5YG 35
5YG H13 H13 H 0 1 N N N -21.324 8.990 -18.538 -6.548 2.134 1.971 H13 5YG 36
5YG H14 H14 H 0 1 N N N -21.167 7.444 -16.612 -5.354 -0.013 2.140 H14 5YG 37
5YG H15 H15 H 0 1 N N N -21.163 2.288 -15.528 -0.263 -0.868 -1.873 H15 5YG 38
5YG H16 H16 H 0 1 N N N -21.913 1.749 -10.631 3.180 1.913 -0.572 H16 5YG 39
5YG H17 H17 H 0 1 N N N -22.502 5.468 -13.013 -0.467 -0.806 2.399 H17 5YG 40
5YG H18 H18 H 0 1 N N N -19.370 3.757 -16.435 -2.684 -1.296 -1.977 H18 5YG 41
5YG H19 H19 H 0 1 N N N -22.618 -0.154 -9.225 5.541 2.329 -0.016 H19 5YG 42
5YG H20 H20 H 0 1 N N N -23.817 3.083 -14.210 1.604 -0.480 1.193 H20 5YG 43
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5YG N17 C16 DOUB Y N 1
5YG N17 C18 SING Y N 2
5YG C16 C15 SING Y N 3
5YG C18 C19 DOUB Y N 4
5YG C15 C14 DOUB Y N 5
5YG C19 C14 SING Y N 6
5YG C14 C13 SING N N 7
5YG C20 C12 DOUB Y N 8
5YG C20 C21 SING Y N 9
5YG C13 C12 SING N N 10
5YG C12 C11 SING Y N 11
5YG C21 C09 DOUB Y N 12
5YG C11 C10 DOUB Y N 13
5YG C09 C10 SING Y N 14
5YG C09 N08 SING N N 15
5YG N08 C07 SING N N 16
5YG C07 C06 SING N N 17
5YG C06 C05 DOUB Y N 18
5YG C06 C22 SING Y N 19
5YG C05 C04 SING Y N 20
5YG C22 C23 DOUB Y N 21
5YG C04 C03 DOUB Y N 22
5YG C23 C03 SING Y N 23
5YG C03 O02 SING N N 24
5YG O02 C01 SING N N 25
5YG C01 H1 SING N N 26
5YG C01 H2 SING N N 27
5YG C01 H3 SING N N 28
5YG C04 H4 SING N N 29
5YG C05 H5 SING N N 30
5YG C07 H6 SING N N 31
5YG C07 H7 SING N N 32
5YG C11 H8 SING N N 33
5YG C13 H9 SING N N 34
5YG C13 H10 SING N N 35
5YG C15 H11 SING N N 36
5YG C16 H12 SING N N 37
5YG C18 H13 SING N N 38
5YG C19 H14 SING N N 39
5YG C21 H15 SING N N 40
5YG C22 H16 SING N N 41
5YG C10 H17 SING N N 42
5YG C20 H18 SING N N 43
5YG C23 H19 SING N N 44
5YG N08 H20 SING N N 45
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5YG InChI InChI 1.03 "InChI=1S/C20H20N2O/c1-23-20-8-4-18(5-9-20)15-22-19-6-2-16(3-7-19)14-17-10-12-21-13-11-17/h2-13,22H,14-15H2,1H3"
5YG InChIKey InChI 1.03 FVAKBCRCJCQWCW-UHFFFAOYSA-N
5YG SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CNc2ccc(Cc3ccncc3)cc2)cc1"
5YG SMILES CACTVS 3.385 "COc1ccc(CNc2ccc(Cc3ccncc3)cc2)cc1"
5YG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1)CNc2ccc(cc2)Cc3ccncc3"
5YG SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1)CNc2ccc(cc2)Cc3ccncc3"
#
_pdbx_chem_comp_identifier.comp_id 5YG
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "~{N}-[(4-methoxyphenyl)methyl]-4-(pyridin-4-ylmethyl)aniline"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5YG "Create component" 2021-07-15 PDBE
5YG "Initial release" 2022-11-16 RCSB
#