data_5YS # _chem_comp.id 5YS _chem_comp.name "~{N}-[(1~{R})-1-(3-methoxyphenyl)ethyl]-4-pyridin-4-yl-piperidine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H25 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-19 _chem_comp.pdbx_modified_date 2022-07-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.431 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5YS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7P6N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5YS C2 C1 C 0 1 N N N 82.025 40.390 18.156 -0.172 2.039 -0.351 C2 5YS 1 5YS C4 C2 C 0 1 N N R 80.752 41.314 16.296 -2.562 1.570 -0.295 C4 5YS 2 5YS C6 C3 C 0 1 N N N 80.462 40.915 14.854 -3.200 2.869 0.203 C6 5YS 3 5YS C7 C4 C 0 1 Y N N 81.556 42.577 16.306 -3.401 0.398 0.147 C7 5YS 4 5YS C8 C5 C 0 1 Y N N 82.926 42.545 16.262 -3.295 -0.079 1.440 C8 5YS 5 5YS C11 C6 C 0 1 Y N N 81.590 44.967 16.374 -5.046 -1.278 -0.335 C11 5YS 6 5YS C16 C7 C 0 1 N N N 82.846 37.769 18.042 1.320 1.061 1.326 C16 5YS 7 5YS C17 C8 C 0 1 N N N 84.285 37.282 18.159 2.315 -0.062 1.015 C17 5YS 8 5YS C18 C9 C 0 1 N N N 84.657 37.196 19.636 3.579 0.539 0.396 C18 5YS 9 5YS C19 C10 C 0 1 N N N 84.812 38.616 20.174 3.221 1.243 -0.915 C19 5YS 10 5YS C21 C11 C 0 1 Y N N 85.945 36.439 19.856 4.574 -0.559 0.120 C21 5YS 11 5YS C23 C12 C 0 1 Y N N 87.876 35.257 19.077 5.198 -2.591 -0.967 C23 5YS 12 5YS O1 O1 O 0 1 N N N 81.958 41.448 18.730 -0.363 2.756 -1.314 O1 5YS 13 5YS N3 N1 N 0 1 N N N 81.469 40.228 16.951 -1.214 1.444 0.263 N3 5YS 14 5YS C9 C13 C 0 1 Y N N 83.622 43.732 16.273 -4.062 -1.154 1.848 C9 5YS 15 5YS C10 C14 C 0 1 Y N N 82.964 44.937 16.331 -4.938 -1.754 0.964 C10 5YS 16 5YS O12 O2 O 0 1 N N N 80.969 46.172 16.429 -5.906 -1.866 -1.206 O12 5YS 17 5YS C13 C15 C 0 1 N N N 79.543 46.276 16.477 -6.669 -2.972 -0.719 C13 5YS 18 5YS C14 C16 C 0 1 Y N N 80.893 43.775 16.360 -4.278 -0.195 -0.740 C14 5YS 19 5YS N15 N2 N 0 1 N N N 82.742 39.215 18.791 1.082 1.834 0.099 N15 5YS 20 5YS C20 C17 C 0 1 N N N 83.451 39.313 20.252 2.236 2.381 -0.627 C20 5YS 21 5YS C22 C18 C 0 1 Y N N 86.708 35.938 18.816 4.260 -1.602 -0.738 C22 5YS 22 5YS N24 N3 N 0 1 Y N N 88.279 35.075 20.310 6.378 -2.551 -0.379 N24 5YS 23 5YS C25 C19 C 0 1 Y N N 87.586 35.533 21.325 6.712 -1.572 0.438 C25 5YS 24 5YS C26 C20 C 0 1 Y N N 86.409 36.221 21.136 5.826 -0.548 0.715 C26 5YS 25 5YS H1 H1 H 0 1 N N N 79.797 41.491 16.813 -2.505 1.587 -1.383 H1 5YS 26 5YS H2 H2 H 0 1 N N N 79.871 39.987 14.841 -4.204 2.963 -0.212 H2 5YS 27 5YS H3 H3 H 0 1 N N N 79.895 41.717 14.359 -3.257 2.852 1.291 H3 5YS 28 5YS H4 H4 H 0 1 N N N 81.410 40.753 14.321 -2.594 3.717 -0.116 H4 5YS 29 5YS H5 H5 H 0 1 N N N 83.451 41.602 16.219 -2.611 0.389 2.133 H5 5YS 30 5YS H6 H6 H 0 1 N N N 82.573 37.877 16.982 0.381 0.631 1.675 H6 5YS 31 5YS H7 H7 H 0 1 N N N 82.168 37.049 18.524 1.734 1.714 2.095 H7 5YS 32 5YS H8 H8 H 0 1 N N N 84.378 36.288 17.696 2.574 -0.583 1.937 H8 5YS 33 5YS H9 H9 H 0 1 N N N 84.957 37.988 17.649 1.864 -0.764 0.314 H9 5YS 34 5YS H10 H10 H 0 1 N N N 83.844 36.693 20.181 4.016 1.259 1.087 H10 5YS 35 5YS H11 H11 H 0 1 N N N 85.256 38.575 21.180 4.125 1.650 -1.368 H11 5YS 36 5YS H12 H12 H 0 1 N N N 85.473 39.186 19.505 2.761 0.529 -1.598 H12 5YS 37 5YS H13 H13 H 0 1 N N N 88.465 34.870 18.258 4.959 -3.409 -1.630 H13 5YS 38 5YS H14 H14 H 0 1 N N N 81.547 39.344 16.490 -1.071 0.932 1.074 H14 5YS 39 5YS H15 H15 H 0 1 N N N 84.701 43.716 16.236 -3.978 -1.525 2.859 H15 5YS 40 5YS H16 H16 H 0 1 N N N 83.525 45.860 16.343 -5.537 -2.594 1.283 H16 5YS 41 5YS H17 H17 H 0 1 N N N 79.253 47.336 16.517 -5.994 -3.764 -0.394 H17 5YS 42 5YS H18 H18 H 0 1 N N N 79.111 45.812 15.578 -7.281 -2.648 0.123 H18 5YS 43 5YS H19 H19 H 0 1 N N N 79.168 45.759 17.373 -7.314 -3.347 -1.513 H19 5YS 44 5YS H20 H20 H 0 1 N N N 79.814 43.787 16.392 -4.364 0.181 -1.749 H20 5YS 45 5YS H21 H21 H 0 1 N N N 83.589 40.369 20.528 2.725 3.141 -0.017 H21 5YS 46 5YS H22 H22 H 0 1 N N N 82.821 38.816 21.005 1.902 2.822 -1.566 H22 5YS 47 5YS H23 H23 H 0 1 N N N 86.386 36.082 17.795 3.295 -1.641 -1.222 H23 5YS 48 5YS H24 H24 H 0 1 N N N 87.946 35.367 22.330 7.688 -1.573 0.901 H24 5YS 49 5YS H25 H25 H 0 1 N N N 85.852 36.588 21.985 6.106 0.252 1.385 H25 5YS 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5YS C6 C4 SING N N 1 5YS C8 C9 DOUB Y N 2 5YS C8 C7 SING Y N 3 5YS C9 C10 SING Y N 4 5YS C4 C7 SING N N 5 5YS C4 N3 SING N N 6 5YS C7 C14 DOUB Y N 7 5YS C10 C11 DOUB Y N 8 5YS C14 C11 SING Y N 9 5YS C11 O12 SING N N 10 5YS O12 C13 SING N N 11 5YS N3 C2 SING N N 12 5YS C16 C17 SING N N 13 5YS C16 N15 SING N N 14 5YS C2 O1 DOUB N N 15 5YS C2 N15 SING N N 16 5YS C17 C18 SING N N 17 5YS N15 C20 SING N N 18 5YS C22 C23 DOUB Y N 19 5YS C22 C21 SING Y N 20 5YS C23 N24 SING Y N 21 5YS C18 C21 SING N N 22 5YS C18 C19 SING N N 23 5YS C21 C26 DOUB Y N 24 5YS C19 C20 SING N N 25 5YS N24 C25 DOUB Y N 26 5YS C26 C25 SING Y N 27 5YS C4 H1 SING N N 28 5YS C6 H2 SING N N 29 5YS C6 H3 SING N N 30 5YS C6 H4 SING N N 31 5YS C8 H5 SING N N 32 5YS C16 H6 SING N N 33 5YS C16 H7 SING N N 34 5YS C17 H8 SING N N 35 5YS C17 H9 SING N N 36 5YS C18 H10 SING N N 37 5YS C19 H11 SING N N 38 5YS C19 H12 SING N N 39 5YS C23 H13 SING N N 40 5YS N3 H14 SING N N 41 5YS C9 H15 SING N N 42 5YS C10 H16 SING N N 43 5YS C13 H17 SING N N 44 5YS C13 H18 SING N N 45 5YS C13 H19 SING N N 46 5YS C14 H20 SING N N 47 5YS C20 H21 SING N N 48 5YS C20 H22 SING N N 49 5YS C22 H23 SING N N 50 5YS C25 H24 SING N N 51 5YS C26 H25 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5YS InChI InChI 1.03 "InChI=1S/C20H25N3O2/c1-15(18-4-3-5-19(14-18)25-2)22-20(24)23-12-8-17(9-13-23)16-6-10-21-11-7-16/h3-7,10-11,14-15,17H,8-9,12-13H2,1-2H3,(H,22,24)/t15-/m1/s1" 5YS InChIKey InChI 1.03 TUPUYLLHTGZRRB-OAHLLOKOSA-N 5YS SMILES_CANONICAL CACTVS 3.385 "COc1cccc(c1)[C@@H](C)NC(=O)N2CCC(CC2)c3ccncc3" 5YS SMILES CACTVS 3.385 "COc1cccc(c1)[CH](C)NC(=O)N2CCC(CC2)c3ccncc3" 5YS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cccc(c1)OC)NC(=O)N2CCC(CC2)c3ccncc3" 5YS SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc(c1)OC)NC(=O)N2CCC(CC2)c3ccncc3" # _pdbx_chem_comp_identifier.comp_id 5YS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1~{R})-1-(3-methoxyphenyl)ethyl]-4-pyridin-4-yl-piperidine-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5YS "Create component" 2021-07-19 PDBE 5YS "Initial release" 2022-07-27 RCSB #