data_5Z7 # _chem_comp.id 5Z7 _chem_comp.name "6-[4-(4-bromo-3-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 Br Cl N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-28 _chem_comp.pdbx_modified_date 2021-11-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 413.654 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5Z7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RMB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5Z7 C1 C1 C 0 1 N N N 14.672 -1.652 17.189 -4.635 0.427 -0.213 C1 5Z7 1 5Z7 C10 C2 C 0 1 Y N N 9.029 0.054 19.360 1.517 0.245 0.772 C10 5Z7 2 5Z7 C11 C3 C 0 1 Y N N 8.137 -0.672 18.560 2.332 1.010 -0.054 C11 5Z7 3 5Z7 C12 C4 C 0 1 Y N N 6.768 -0.465 18.674 3.635 0.618 -0.291 C12 5Z7 4 5Z7 C13 C5 C 0 1 Y N N 6.259 0.456 19.574 4.129 -0.536 0.294 C13 5Z7 5 5Z7 C14 C6 C 0 1 Y N N 7.145 1.181 20.365 3.320 -1.299 1.117 C14 5Z7 6 5Z7 C15 C7 C 0 1 Y N N 8.503 0.983 20.269 2.016 -0.912 1.357 C15 5Z7 7 5Z7 C17 C8 C 0 1 N N N 15.931 -3.707 17.452 -5.578 -1.400 -1.394 C17 5Z7 8 5Z7 C2 C9 C 0 1 N N N 14.220 -0.472 18.005 -3.617 1.503 -0.130 C2 5Z7 9 5Z7 C20 C10 C 0 1 N N N 14.952 -3.070 15.288 -6.543 -0.802 0.650 C20 5Z7 10 5Z7 C22 C11 C 0 1 N N N 14.425 -1.866 15.882 -5.551 0.272 0.778 C22 5Z7 11 5Z7 C5 C12 C 0 1 N N N 12.219 -1.695 18.913 -1.499 2.383 0.739 C5 5Z7 12 5Z7 C6 C13 C 0 1 N N N 10.860 -1.241 18.431 -0.117 1.886 0.303 C6 5Z7 13 5Z7 C8 C14 C 0 1 N N N 11.310 1.007 19.253 -0.745 -0.428 0.672 C8 5Z7 14 5Z7 C9 C15 C 0 1 N N N 12.727 0.577 19.611 -2.162 -0.023 1.122 C9 5Z7 15 5Z7 N16 N1 N 0 1 N N N 15.398 -2.543 17.923 -4.664 -0.420 -1.300 N16 5Z7 16 5Z7 N19 N2 N 0 1 N N N 15.674 -3.902 16.129 -6.503 -1.599 -0.438 N19 5Z7 17 5Z7 N4 N3 N 0 1 N N N 13.153 -0.574 18.812 -2.472 1.296 0.549 N4 5Z7 18 5Z7 N7 N4 N 0 1 N N N 10.408 -0.139 19.284 0.200 0.642 1.018 N7 5Z7 19 5Z7 O18 O1 O 0 1 N N N 16.575 -4.483 18.137 -5.570 -2.126 -2.369 O18 5Z7 20 5Z7 O21 O2 O 0 1 N N N 14.813 -3.410 14.135 -7.381 -0.976 1.515 O21 5Z7 21 5Z7 O3 O3 O 0 1 N N N 14.887 0.546 17.890 -3.816 2.571 -0.675 O3 5Z7 22 5Z7 BR24 BR1 BR 0 0 N N N 4.396 0.753 19.742 5.914 -1.071 -0.032 BR24 5Z7 23 5Z7 CL23 CL1 CL 0 0 N N N 5.684 -1.385 17.656 4.654 1.572 -1.323 CL23 5Z7 24 5Z7 H1 H1 H 0 1 N N N 8.515 -1.395 17.852 1.946 1.909 -0.511 H1 5Z7 25 5Z7 H2 H2 H 0 1 N N N 6.761 1.909 21.064 3.708 -2.199 1.571 H2 5Z7 26 5Z7 H3 H3 H 0 1 N N N 9.171 1.549 20.901 1.385 -1.508 1.999 H3 5Z7 27 5Z7 H4 H4 H 0 1 N N N 13.852 -1.160 15.299 -5.549 0.923 1.640 H4 5Z7 28 5Z7 H5 H5 H 0 1 N N N 12.149 -2.025 19.960 -1.471 2.670 1.790 H5 5Z7 29 5Z7 H6 H6 H 0 1 N N N 12.573 -2.529 18.289 -1.788 3.241 0.133 H6 5Z7 30 5Z7 H7 H7 H 0 1 N N N 10.932 -0.898 17.388 -0.120 1.698 -0.771 H7 5Z7 31 5Z7 H8 H8 H 0 1 N N N 10.146 -2.076 18.494 0.632 2.642 0.539 H8 5Z7 32 5Z7 H9 H9 H 0 1 N N N 11.308 1.443 18.243 -0.452 -1.349 1.174 H9 5Z7 33 5Z7 H10 H10 H 0 1 N N N 10.965 1.759 19.978 -0.739 -0.583 -0.407 H10 5Z7 34 5Z7 H11 H11 H 0 1 N N N 12.760 0.305 20.676 -2.883 -0.759 0.766 H11 5Z7 35 5Z7 H12 H12 H 0 1 N N N 13.414 1.416 19.425 -2.199 0.030 2.210 H12 5Z7 36 5Z7 H13 H13 H 0 1 N N N 15.552 -2.325 18.887 -4.013 -0.307 -2.010 H13 5Z7 37 5Z7 H14 H14 H 0 1 N N N 16.046 -4.735 15.720 -7.152 -2.313 -0.536 H14 5Z7 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5Z7 O21 C20 DOUB N N 1 5Z7 C20 C22 SING N N 2 5Z7 C20 N19 SING N N 3 5Z7 C22 C1 DOUB N N 4 5Z7 N19 C17 SING N N 5 5Z7 C1 N16 SING N N 6 5Z7 C1 C2 SING N N 7 5Z7 C17 N16 SING N N 8 5Z7 C17 O18 DOUB N N 9 5Z7 CL23 C12 SING N N 10 5Z7 O3 C2 DOUB N N 11 5Z7 C2 N4 SING N N 12 5Z7 C6 C5 SING N N 13 5Z7 C6 N7 SING N N 14 5Z7 C11 C12 DOUB Y N 15 5Z7 C11 C10 SING Y N 16 5Z7 C12 C13 SING Y N 17 5Z7 N4 C5 SING N N 18 5Z7 N4 C9 SING N N 19 5Z7 C8 N7 SING N N 20 5Z7 C8 C9 SING N N 21 5Z7 N7 C10 SING N N 22 5Z7 C10 C15 DOUB Y N 23 5Z7 C13 BR24 SING N N 24 5Z7 C13 C14 DOUB Y N 25 5Z7 C15 C14 SING Y N 26 5Z7 C11 H1 SING N N 27 5Z7 C14 H2 SING N N 28 5Z7 C15 H3 SING N N 29 5Z7 C22 H4 SING N N 30 5Z7 C5 H5 SING N N 31 5Z7 C5 H6 SING N N 32 5Z7 C6 H7 SING N N 33 5Z7 C6 H8 SING N N 34 5Z7 C8 H9 SING N N 35 5Z7 C8 H10 SING N N 36 5Z7 C9 H11 SING N N 37 5Z7 C9 H12 SING N N 38 5Z7 N16 H13 SING N N 39 5Z7 N19 H14 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5Z7 SMILES ACDLabs 12.01 "O=C(C1=CC(=O)NC(=O)N1)N1CCN(CC1)c1ccc(Br)c(Cl)c1" 5Z7 InChI InChI 1.03 "InChI=1S/C15H14BrClN4O3/c16-10-2-1-9(7-11(10)17)20-3-5-21(6-4-20)14(23)12-8-13(22)19-15(24)18-12/h1-2,7-8H,3-6H2,(H2,18,19,22,24)" 5Z7 InChIKey InChI 1.03 LMYRFZVTGXUSKU-UHFFFAOYSA-N 5Z7 SMILES_CANONICAL CACTVS 3.385 "Clc1cc(ccc1Br)N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3" 5Z7 SMILES CACTVS 3.385 "Clc1cc(ccc1Br)N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3" 5Z7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3)Cl)Br" 5Z7 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3)Cl)Br" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5Z7 "SYSTEMATIC NAME" ACDLabs 12.01 "6-[4-(4-bromo-3-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione" 5Z7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[4-(4-bromanyl-3-chloranyl-phenyl)piperazin-1-yl]carbonyl-1~{H}-pyrimidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5Z7 "Create component" 2021-07-28 RCSB 5Z7 "Initial release" 2021-11-10 RCSB ##