data_5ZB # _chem_comp.id 5ZB _chem_comp.name "(2R)-2-{acetyl[4-(1H-pyrrol-1-yl)phenyl]amino}-N-[(1S)-1-phenylethyl]-2-(pyridin-3-yl)acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H26 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-29 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 438.521 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5ZB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RN0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5ZB C10 C1 C 0 1 Y N N N N N -23.330 -3.737 17.970 6.729 2.693 -0.098 C10 5ZB 1 5ZB C13 C2 C 0 1 Y N N N N N -19.876 -2.146 14.968 2.547 0.845 -0.559 C13 5ZB 2 5ZB C15 C3 C 0 1 N N R N N N -19.718 -0.316 10.715 -0.713 -1.607 0.491 C15 5ZB 3 5ZB C17 C4 C 0 1 Y N N N N N -17.291 -0.242 10.438 0.631 -2.049 -1.579 C17 5ZB 4 5ZB C20 C5 C 0 1 Y N N N N N -17.326 1.565 8.424 -1.600 -2.210 -3.126 C20 5ZB 5 5ZB C21 C6 C 0 1 Y N N N N N -18.529 1.092 9.005 -1.747 -1.959 -1.771 C21 5ZB 6 5ZB C22 C7 C 0 1 N N N N N N -19.754 0.751 11.885 -1.186 -0.193 0.710 C22 5ZB 7 5ZB C24 C8 C 0 1 N N S N N N -20.432 2.846 13.193 -2.837 1.577 0.432 C24 5ZB 8 5ZB C26 C9 C 0 1 Y N N N N N -20.981 2.175 14.385 -4.342 1.619 0.367 C26 5ZB 9 5ZB C28 C10 C 0 1 Y N N N N N -20.760 1.312 16.661 -6.395 0.899 -0.632 C28 5ZB 10 5ZB O01 O1 O 0 1 N N N N N N -18.574 -2.507 9.348 1.907 -3.002 2.432 O01 5ZB 11 5ZB C02 C11 C 0 1 N N N N N N -18.945 -2.717 10.499 0.795 -2.785 1.999 C02 5ZB 12 5ZB N03 N1 N 0 1 N N N N N N -19.547 -1.589 11.248 0.599 -1.785 1.117 N03 5ZB 13 5ZB C04 C12 C 0 1 Y N N N N N -19.997 -1.860 12.524 1.651 -0.916 0.799 C04 5ZB 14 5ZB C05 C13 C 0 1 Y N N N N N -21.324 -2.225 12.662 2.832 -0.960 1.526 C05 5ZB 15 5ZB C06 C14 C 0 1 Y N N N N N -21.895 -2.544 13.894 3.871 -0.108 1.209 C06 5ZB 16 5ZB C07 C15 C 0 1 Y N N N N N -21.220 -2.502 15.083 3.729 0.801 0.169 C07 5ZB 17 5ZB N08 N2 N 0 1 Y N N N N N -21.880 -2.837 16.386 4.780 1.675 -0.147 N08 5ZB 18 5ZB C09 C16 C 0 1 Y N N N N N -23.012 -3.678 16.558 5.987 1.731 0.489 C09 5ZB 19 5ZB C11 C17 C 0 1 Y N N N N N -22.384 -2.908 18.693 5.954 3.251 -1.135 C11 5ZB 20 5ZB C12 C18 C 0 1 Y N N N N N -21.496 -2.384 17.744 4.769 2.606 -1.146 C12 5ZB 21 5ZB C14 C19 C 0 1 Y N N N N N -19.281 -1.796 13.751 1.511 -0.011 -0.245 C14 5ZB 22 5ZB C16 C20 C 0 1 Y N N N N N -18.539 0.161 10.006 -0.606 -1.878 -0.987 C16 5ZB 23 5ZB N18 N3 N 0 1 Y N N N N N -16.095 0.165 9.964 0.733 -2.282 -2.873 N18 5ZB 24 5ZB C19 C21 C 0 1 Y N N N N N -16.121 1.082 8.932 -0.330 -2.365 -3.649 C19 5ZB 25 5ZB N23 N4 N 0 1 N N N N N N -20.617 1.912 11.978 -2.378 0.203 0.219 N23 5ZB 26 5ZB C25 C22 C 0 1 N N N N N N -21.042 4.212 12.869 -2.254 2.484 -0.654 C25 5ZB 27 5ZB C27 C23 C 0 1 Y N N N N N -20.248 1.995 15.524 -5.015 0.860 -0.572 C27 5ZB 28 5ZB C29 C24 C 0 1 Y N N N N N -22.052 0.801 16.629 -7.103 1.696 0.247 C29 5ZB 29 5ZB C30 C25 C 0 1 Y N N N N N -22.744 0.960 15.476 -6.431 2.451 1.190 C30 5ZB 30 5ZB C31 C26 C 0 1 Y N N N N N -22.209 1.651 14.397 -5.050 2.413 1.250 C31 5ZB 31 5ZB O32 O2 O 0 1 N N N N N N -18.902 0.589 12.801 -0.495 0.589 1.328 O32 5ZB 32 5ZB C33 C27 C 0 1 N N N N N N -18.597 -4.088 11.059 -0.367 -3.634 2.446 C33 5ZB 33 5ZB H1 H1 H 0 1 N N N N N N -24.137 -4.304 18.411 7.731 2.984 0.178 H1 5ZB 34 5ZB H2 H2 H 0 1 N N N N N N -19.267 -2.140 15.860 2.438 1.552 -1.368 H2 5ZB 35 5ZB H3 H3 H 0 1 N N N N N N -20.626 -0.229 10.100 -1.425 -2.302 0.937 H3 5ZB 36 5ZB H4 H4 H 0 1 N N N N N N -17.270 -0.961 11.243 1.525 -1.987 -0.976 H4 5ZB 37 5ZB H5 H5 H 0 1 N N N N N N -17.342 2.278 7.613 -2.467 -2.280 -3.767 H5 5ZB 38 5ZB H6 H6 H 0 1 N N N N N N -19.470 1.480 8.645 -2.727 -1.833 -1.335 H6 5ZB 39 5ZB H7 H7 H 0 1 N N N N N N -19.351 2.988 13.341 -2.506 1.924 1.411 H7 5ZB 40 5ZB H8 H8 H 0 1 N N N N N N -20.149 1.191 17.543 -6.921 0.306 -1.366 H8 5ZB 41 5ZB H9 H9 H 0 1 N N N N N N -21.944 -2.265 11.779 2.941 -1.664 2.338 H9 5ZB 42 5ZB H10 H10 H 0 1 N N N N N N -22.933 -2.842 13.910 4.790 -0.141 1.775 H10 5ZB 43 5ZB H11 H11 H 0 1 N N N N N N -23.545 -4.187 15.769 6.295 1.113 1.319 H11 5ZB 44 5ZB H12 H12 H 0 1 N N N N N N -22.367 -2.729 19.758 6.253 4.049 -1.798 H12 5ZB 45 5ZB H13 H13 H 0 1 N N N N N N -20.655 -1.744 17.969 3.950 2.798 -1.823 H13 5ZB 46 5ZB H14 H14 H 0 1 N N N N N N -18.252 -1.469 13.743 0.592 0.024 -0.811 H14 5ZB 47 5ZB H15 H15 H 0 1 N N N N N N -15.190 1.432 8.510 -0.207 -2.561 -4.704 H15 5ZB 48 5ZB H16 H16 H 0 1 N N N N N N -21.308 2.101 11.280 -2.930 -0.423 -0.275 H16 5ZB 49 5ZB H17 H17 H 0 1 N N N N N N -20.915 4.885 13.730 -1.166 2.453 -0.607 H17 5ZB 50 5ZB H18 H18 H 0 1 N N N N N N -20.536 4.640 11.991 -2.585 2.137 -1.633 H18 5ZB 51 5ZB H19 H19 H 0 1 N N N N N N -22.114 4.093 12.653 -2.596 3.507 -0.496 H19 5ZB 52 5ZB H20 H20 H 0 1 N N N N N N -19.242 2.386 15.562 -4.462 0.237 -1.260 H20 5ZB 53 5ZB H21 H21 H 0 1 N N N N N N -22.484 0.301 17.483 -8.182 1.727 0.200 H21 5ZB 54 5ZB H22 H22 H 0 1 N N N N N N -23.735 0.539 15.394 -6.984 3.075 1.877 H22 5ZB 55 5ZB H23 H23 H 0 1 N N N N N N -22.822 1.772 13.516 -4.525 3.002 1.987 H23 5ZB 56 5ZB H24 H24 H 0 1 N N N N N N -18.053 -4.668 10.299 -0.541 -3.479 3.511 H24 5ZB 57 5ZB H25 H25 H 0 1 N N N N N N -17.965 -3.970 11.952 -1.259 -3.352 1.887 H25 5ZB 58 5ZB H26 H26 H 0 1 N N N N N N -19.522 -4.618 11.332 -0.140 -4.685 2.265 H26 5ZB 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5ZB C20 C19 DOUB Y N 1 5ZB C20 C21 SING Y N 2 5ZB C19 N18 SING Y N 3 5ZB C21 C16 DOUB Y N 4 5ZB O01 C02 DOUB N N 5 5ZB N18 C17 DOUB Y N 6 5ZB C16 C17 SING Y N 7 5ZB C16 C15 SING N N 8 5ZB C02 C33 SING N N 9 5ZB C02 N03 SING N N 10 5ZB C15 N03 SING N N 11 5ZB C15 C22 SING N N 12 5ZB N03 C04 SING N N 13 5ZB C22 N23 SING N N 14 5ZB C22 O32 DOUB N N 15 5ZB N23 C24 SING N N 16 5ZB C04 C05 DOUB Y N 17 5ZB C04 C14 SING Y N 18 5ZB C05 C06 SING Y N 19 5ZB C25 C24 SING N N 20 5ZB C24 C26 SING N N 21 5ZB C14 C13 DOUB Y N 22 5ZB C06 C07 DOUB Y N 23 5ZB C26 C31 DOUB Y N 24 5ZB C26 C27 SING Y N 25 5ZB C31 C30 SING Y N 26 5ZB C13 C07 SING Y N 27 5ZB C07 N08 SING N N 28 5ZB C30 C29 DOUB Y N 29 5ZB C27 C28 DOUB Y N 30 5ZB N08 C09 SING Y N 31 5ZB N08 C12 SING Y N 32 5ZB C09 C10 DOUB Y N 33 5ZB C29 C28 SING Y N 34 5ZB C12 C11 DOUB Y N 35 5ZB C10 C11 SING Y N 36 5ZB C10 H1 SING N N 37 5ZB C13 H2 SING N N 38 5ZB C15 H3 SING N N 39 5ZB C17 H4 SING N N 40 5ZB C20 H5 SING N N 41 5ZB C21 H6 SING N N 42 5ZB C24 H7 SING N N 43 5ZB C28 H8 SING N N 44 5ZB C05 H9 SING N N 45 5ZB C06 H10 SING N N 46 5ZB C09 H11 SING N N 47 5ZB C11 H12 SING N N 48 5ZB C12 H13 SING N N 49 5ZB C14 H14 SING N N 50 5ZB C19 H15 SING N N 51 5ZB N23 H16 SING N N 52 5ZB C25 H17 SING N N 53 5ZB C25 H18 SING N N 54 5ZB C25 H19 SING N N 55 5ZB C27 H20 SING N N 56 5ZB C29 H21 SING N N 57 5ZB C30 H22 SING N N 58 5ZB C31 H23 SING N N 59 5ZB C33 H24 SING N N 60 5ZB C33 H25 SING N N 61 5ZB C33 H26 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5ZB SMILES ACDLabs 12.01 "CC(=O)N(c1ccc(cc1)n1cccc1)C(c1cccnc1)C(=O)NC(C)c1ccccc1" 5ZB InChI InChI 1.03 "InChI=1S/C27H26N4O2/c1-20(22-9-4-3-5-10-22)29-27(33)26(23-11-8-16-28-19-23)31(21(2)32)25-14-12-24(13-15-25)30-17-6-7-18-30/h3-20,26H,1-2H3,(H,29,33)/t20-,26+/m0/s1" 5ZB InChIKey InChI 1.03 JHNKYRWLHFZNLP-RXFWQSSRSA-N 5ZB SMILES_CANONICAL CACTVS 3.385 "C[C@H](NC(=O)[C@H](N(C(C)=O)c1ccc(cc1)n2cccc2)c3cccnc3)c4ccccc4" 5ZB SMILES CACTVS 3.385 "C[CH](NC(=O)[CH](N(C(C)=O)c1ccc(cc1)n2cccc2)c3cccnc3)c4ccccc4" 5ZB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1ccccc1)NC(=O)[C@@H](c2cccnc2)N(c3ccc(cc3)n4cccc4)C(=O)C" 5ZB SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ccccc1)NC(=O)C(c2cccnc2)N(c3ccc(cc3)n4cccc4)C(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5ZB "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2-{acetyl[4-(1H-pyrrol-1-yl)phenyl]amino}-N-[(1S)-1-phenylethyl]-2-(pyridin-3-yl)acetamide" 5ZB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2-[ethanoyl-(4-pyrrol-1-ylphenyl)amino]-~{N}-[(1~{S})-1-phenylethyl]-2-pyridin-3-yl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5ZB "Create component" 2021-07-29 RCSB 5ZB "Initial release" 2021-08-11 RCSB 5ZB "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 5ZB _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C33 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #