data_5ZQ # _chem_comp.id 5ZQ _chem_comp.name "2-[(6S,10S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]-N-[(pyridin-2-yl)methyl]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H23 Cl N6 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-29 _chem_comp.pdbx_modified_date 2022-07-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 491.008 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5ZQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RN2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5ZQ N1 N1 N 0 1 N N N 29.474 15.947 -2.864 -0.909 0.298 1.782 N1 5ZQ 1 5ZQ N3 N2 N 0 1 Y N N 30.684 13.725 -6.550 5.174 -1.673 -0.844 N3 5ZQ 2 5ZQ C4 C1 C 0 1 N N N 25.412 14.723 -1.710 -0.920 -1.306 -2.155 C4 5ZQ 3 5ZQ C5 C2 C 0 1 Y N N 27.594 15.881 -1.095 -1.282 0.760 -0.614 C5 5ZQ 4 5ZQ C6 C3 C 0 1 N N N 28.076 15.835 -2.524 -1.378 -0.038 0.624 C6 5ZQ 5 5ZQ C7 C4 C 0 1 Y N N 27.285 16.492 -3.641 -2.077 -1.341 0.534 C7 5ZQ 6 5ZQ C8 C5 C 0 1 Y N N 26.189 17.449 -3.248 -1.671 -2.410 1.332 C8 5ZQ 7 5ZQ C10 C6 C 0 1 Y N N 25.720 17.750 -5.591 -3.382 -3.777 0.363 C10 5ZQ 8 5ZQ C13 C7 C 0 1 N N S 30.402 15.347 -1.900 -0.110 1.509 1.985 C13 5ZQ 9 5ZQ C15 C8 C 0 1 N N N 31.397 13.682 -3.415 2.013 0.331 1.482 C15 5ZQ 10 5ZQ C17 C9 C 0 1 Y N N 31.381 12.413 -6.448 5.241 -1.043 0.313 C17 5ZQ 11 5ZQ C20 C10 C 0 1 Y N N 30.218 11.704 -8.477 7.513 -0.455 -0.125 C20 5ZQ 12 5ZQ C21 C11 C 0 1 Y N N 31.169 11.456 -7.345 6.407 -0.415 0.710 C21 5ZQ 13 5ZQ C22 C12 C 0 1 Y N N 28.336 16.410 -0.172 -1.388 2.133 -0.676 C22 5ZQ 14 5ZQ C24 C13 C 0 1 Y N N 30.201 17.945 0.616 -2.200 4.124 0.567 C24 5ZQ 15 5ZQ C1 C14 C 0 1 N N N 24.858 15.104 1.339 -0.937 0.715 -4.374 C1 5ZQ 16 5ZQ C11 C15 C 0 1 Y N N 26.659 16.902 -5.969 -3.797 -2.716 -0.424 C11 5ZQ 17 5ZQ C12 C16 C 0 1 Y N N 27.500 16.216 -4.915 -3.147 -1.502 -0.347 C12 5ZQ 18 5ZQ C14 C17 C 0 1 N N N 31.677 14.938 -2.582 1.117 1.472 1.072 C14 5ZQ 19 5ZQ C16 C18 C 0 1 N N N 32.345 12.171 -5.277 4.032 -1.006 1.212 C16 5ZQ 20 5ZQ C18 C19 C 0 1 Y N N 29.864 13.940 -7.522 6.206 -1.731 -1.663 C18 5ZQ 21 5ZQ C19 C20 C 0 1 Y N N 29.613 12.842 -8.570 7.405 -1.127 -1.333 C19 5ZQ 22 5ZQ C2 C21 C 0 1 Y N N 26.058 15.474 0.508 -1.102 1.057 -2.916 C2 5ZQ 23 5ZQ C23 C22 C 0 1 Y N N 30.667 16.432 -0.896 -0.949 2.715 1.652 C23 5ZQ 24 5ZQ C25 C23 C 0 1 N N N 29.464 18.799 1.661 -3.012 4.809 -0.502 C25 5ZQ 25 5ZQ C3 C24 C 0 1 Y N N 26.431 15.400 -0.762 -1.099 0.174 -1.931 C3 5ZQ 26 5ZQ C9 C25 C 0 1 Y N N 25.452 18.053 -4.160 -2.325 -3.621 1.244 C9 5ZQ 27 5ZQ N2 N3 N 0 1 N N N 32.409 13.358 -4.404 3.161 0.103 0.814 N2 5ZQ 28 5ZQ N4 N4 N 0 1 Y N N 29.646 16.931 -0.121 -1.520 2.959 0.443 N4 5ZQ 29 5ZQ N5 N5 N 0 1 Y N N 31.772 17.098 -0.649 -1.270 3.705 2.434 N5 5ZQ 30 5ZQ N6 N6 N 0 1 Y N N 31.502 18.092 0.339 -2.014 4.540 1.794 N6 5ZQ 31 5ZQ O1 O1 O 0 1 N N N 30.431 12.985 -3.241 1.701 -0.382 2.412 O1 5ZQ 32 5ZQ S1 S1 S 0 1 Y N N 27.457 16.262 1.398 -1.324 2.679 -2.291 S1 5ZQ 33 5ZQ CL1 CL1 CL 0 0 N N N 24.632 18.528 -6.725 -4.201 -5.305 0.257 CL1 5ZQ 34 5ZQ H5 H3 H 0 1 N N N 25.609 13.642 -1.749 -1.884 -1.756 -2.393 H5 5ZQ 35 5ZQ H6 H4 H 0 1 N N N 24.392 14.896 -1.336 -0.230 -1.467 -2.983 H6 5ZQ 36 5ZQ H4 H5 H 0 1 N N N 25.510 15.150 -2.719 -0.518 -1.764 -1.252 H4 5ZQ 37 5ZQ H7 H7 H 0 1 N N N 26.004 17.644 -2.202 -0.846 -2.289 2.019 H7 5ZQ 38 5ZQ H11 H8 H 0 1 N N N 29.941 14.479 -1.407 0.210 1.564 3.026 H11 5ZQ 39 5ZQ H19 H9 H 0 1 N N N 30.039 10.934 -9.213 8.438 0.026 0.159 H19 5ZQ 40 5ZQ H20 H10 H 0 1 N N N 31.678 10.507 -7.259 6.455 0.100 1.658 H20 5ZQ 41 5ZQ H3 H11 H 0 1 N N N 25.037 15.384 2.388 -0.978 1.628 -4.968 H3 5ZQ 42 5ZQ H1 H12 H 0 1 N N N 23.973 15.638 0.963 0.025 0.225 -4.526 H1 5ZQ 43 5ZQ H2 H13 H 0 1 N N N 24.687 14.019 1.273 -1.739 0.044 -4.683 H2 5ZQ 44 5ZQ H9 H14 H 0 1 N N N 26.824 16.701 -7.017 -4.622 -2.843 -1.109 H9 5ZQ 45 5ZQ H10 H15 H 0 1 N N N 28.266 15.510 -5.200 -3.465 -0.677 -0.967 H10 5ZQ 46 5ZQ H13 H16 H 0 1 N N N 32.448 14.720 -1.829 0.798 1.330 0.040 H13 5ZQ 47 5ZQ H12 H17 H 0 1 N N N 32.024 15.750 -3.238 1.663 2.411 1.159 H12 5ZQ 48 5ZQ H16 H18 H 0 1 N N N 31.993 11.310 -4.691 3.487 -1.945 1.126 H16 5ZQ 49 5ZQ H15 H19 H 0 1 N N N 33.349 11.959 -5.673 4.352 -0.864 2.244 H15 5ZQ 50 5ZQ H17 H20 H 0 1 N N N 29.354 14.889 -7.600 6.114 -2.257 -2.601 H17 5ZQ 51 5ZQ H18 H21 H 0 1 N N N 28.929 13.023 -9.386 8.247 -1.178 -2.007 H18 5ZQ 52 5ZQ H21 H22 H 0 1 N N N 30.167 19.514 2.113 -4.042 4.455 -0.458 H21 5ZQ 53 5ZQ H22 H23 H 0 1 N N N 28.645 19.349 1.174 -2.990 5.886 -0.340 H22 5ZQ 54 5ZQ H23 H24 H 0 1 N N N 29.052 18.145 2.444 -2.591 4.580 -1.481 H23 5ZQ 55 5ZQ H8 H25 H 0 1 N N N 24.676 18.748 -3.876 -2.005 -4.452 1.855 H8 5ZQ 56 5ZQ H14 H26 H 0 1 N N N 33.192 13.973 -4.498 3.411 0.673 0.070 H14 5ZQ 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5ZQ C19 C20 DOUB Y N 1 5ZQ C19 C18 SING Y N 2 5ZQ C20 C21 SING Y N 3 5ZQ C18 N3 DOUB Y N 4 5ZQ C21 C17 DOUB Y N 5 5ZQ CL1 C10 SING N N 6 5ZQ N3 C17 SING Y N 7 5ZQ C17 C16 SING N N 8 5ZQ C11 C10 DOUB Y N 9 5ZQ C11 C12 SING Y N 10 5ZQ C10 C9 SING Y N 11 5ZQ C16 N2 SING N N 12 5ZQ C12 C7 DOUB Y N 13 5ZQ N2 C15 SING N N 14 5ZQ C9 C8 DOUB Y N 15 5ZQ C7 C8 SING Y N 16 5ZQ C7 C6 SING N N 17 5ZQ C15 O1 DOUB N N 18 5ZQ C15 C14 SING N N 19 5ZQ N1 C6 DOUB N N 20 5ZQ N1 C13 SING N N 21 5ZQ C14 C13 SING N N 22 5ZQ C6 C5 SING N N 23 5ZQ C13 C23 SING N N 24 5ZQ C4 C3 SING N N 25 5ZQ C5 C3 SING Y N 26 5ZQ C5 C22 DOUB Y N 27 5ZQ C23 N5 DOUB Y N 28 5ZQ C23 N4 SING Y N 29 5ZQ C3 C2 DOUB Y N 30 5ZQ N5 N6 SING Y N 31 5ZQ C22 N4 SING N N 32 5ZQ C22 S1 SING Y N 33 5ZQ N4 C24 SING Y N 34 5ZQ N6 C24 DOUB Y N 35 5ZQ C2 C1 SING N N 36 5ZQ C2 S1 SING Y N 37 5ZQ C24 C25 SING N N 38 5ZQ C4 H5 SING N N 39 5ZQ C4 H6 SING N N 40 5ZQ C4 H4 SING N N 41 5ZQ C8 H7 SING N N 42 5ZQ C13 H11 SING N N 43 5ZQ C20 H19 SING N N 44 5ZQ C21 H20 SING N N 45 5ZQ C1 H3 SING N N 46 5ZQ C1 H1 SING N N 47 5ZQ C1 H2 SING N N 48 5ZQ C11 H9 SING N N 49 5ZQ C12 H10 SING N N 50 5ZQ C14 H13 SING N N 51 5ZQ C14 H12 SING N N 52 5ZQ C16 H16 SING N N 53 5ZQ C16 H15 SING N N 54 5ZQ C18 H17 SING N N 55 5ZQ C19 H18 SING N N 56 5ZQ C25 H21 SING N N 57 5ZQ C25 H22 SING N N 58 5ZQ C25 H23 SING N N 59 5ZQ C9 H8 SING N N 60 5ZQ N2 H14 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5ZQ SMILES ACDLabs 12.01 "Clc1ccc(cc1)C1=NC(CC(=O)NCc2ccccn2)c2nnc(C)n2c2sc(C)c(C)c21" 5ZQ InChI InChI 1.03 "InChI=1S/C25H23ClN6OS/c1-14-15(2)34-25-22(14)23(17-7-9-18(26)10-8-17)29-20(24-31-30-16(3)32(24)25)12-21(33)28-13-19-6-4-5-11-27-19/h4-11,20H,12-13H2,1-3H3,(H,28,33)/t20-/m0/s1" 5ZQ InChIKey InChI 1.03 IQSNRFQUNLCFPX-FQEVSTJZSA-N 5ZQ SMILES_CANONICAL CACTVS 3.385 "Cc1sc2n3c(C)nnc3[C@H](CC(=O)NCc4ccccn4)N=C(c5ccc(Cl)cc5)c2c1C" 5ZQ SMILES CACTVS 3.385 "Cc1sc2n3c(C)nnc3[CH](CC(=O)NCc4ccccn4)N=C(c5ccc(Cl)cc5)c2c1C" 5ZQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=N[C@H](c3n2c(nn3)C)CC(=O)NCc4ccccn4)c5ccc(cc5)Cl)C" 5ZQ SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=NC(c3n2c(nn3)C)CC(=O)NCc4ccccn4)c5ccc(cc5)Cl)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5ZQ "SYSTEMATIC NAME" ACDLabs 12.01 "2-[(6S,10S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]-N-[(pyridin-2-yl)methyl]acetamide" 5ZQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]-~{N}-(pyridin-2-ylmethyl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5ZQ "Create component" 2021-07-29 RCSB 5ZQ "Initial release" 2022-08-03 RCSB #