data_5ZW # _chem_comp.id 5ZW _chem_comp.name "6-[4-(4-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H15 Cl N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-30 _chem_comp.pdbx_modified_date 2021-11-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 334.758 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5ZW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RNH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5ZW C1 C1 C 0 1 N N N -11.428 -40.675 17.242 -3.365 0.415 -0.281 C1 5ZW 1 5ZW C2 C2 C 0 1 N N N -11.884 -39.514 18.087 -2.336 1.462 -0.496 C2 5ZW 2 5ZW C5 C3 C 0 1 N N N -13.843 -40.844 18.960 -0.169 2.474 0.044 C5 5ZW 3 5ZW C6 C4 C 0 1 N N N -15.268 -40.466 18.572 1.185 1.865 -0.336 C6 5ZW 4 5ZW C8 C5 C 0 1 N N N -14.885 -38.171 19.301 0.559 -0.292 0.580 C8 5ZW 5 5ZW C9 C6 C 0 1 N N N -13.453 -38.535 19.673 -0.828 0.231 0.996 C9 5ZW 6 5ZW C10 C7 C 0 1 Y N N -17.140 -39.135 19.445 2.829 0.342 0.411 C10 5ZW 7 5ZW O3 O1 O 0 1 N N N -11.193 -38.482 18.020 -2.555 2.382 -1.258 O3 5ZW 8 5ZW C11 C8 C 0 1 Y N N -18.073 -39.957 18.779 3.605 0.883 -0.606 C11 5ZW 9 5ZW C12 C9 C 0 1 Y N N -19.446 -39.702 18.871 4.890 0.423 -0.812 C12 5ZW 10 5ZW C13 C10 C 0 1 Y N N -19.886 -38.619 19.629 5.406 -0.577 -0.007 C13 5ZW 11 5ZW C14 C11 C 0 1 Y N N -18.984 -37.794 20.296 4.636 -1.118 1.008 C14 5ZW 12 5ZW C15 C12 C 0 1 Y N N -17.628 -38.054 20.201 3.350 -0.662 1.219 C15 5ZW 13 5ZW C18 C13 C 0 1 N N N -10.165 -42.751 17.342 -4.383 -1.613 -0.967 C18 5ZW 14 5ZW C21 C14 C 0 1 N N N -11.216 -41.978 15.222 -5.234 -0.549 0.933 C21 5ZW 15 5ZW C23 C15 C 0 1 N N N -11.713 -40.822 15.927 -4.228 0.507 0.763 C23 5ZW 16 5ZW N17 N1 N 0 1 N N N -10.685 -41.610 17.924 -3.458 -0.655 -1.144 N17 5ZW 17 5ZW N20 N2 N 0 1 N N N -10.455 -42.881 15.992 -5.257 -1.572 0.054 N20 5ZW 18 5ZW N4 N3 N 0 1 N N N -12.988 -39.654 18.848 -1.158 1.392 0.155 N4 5ZW 19 5ZW N7 N4 N 0 1 N N N -15.747 -39.345 19.402 1.530 0.810 0.626 N7 5ZW 20 5ZW O19 O2 O 0 1 N N N -9.505 -43.565 17.980 -4.431 -2.541 -1.750 O19 5ZW 21 5ZW O22 O3 O 0 1 N N N -11.430 -42.187 14.033 -6.027 -0.506 1.855 O22 5ZW 22 5ZW CL16 CL1 CL 0 0 N N N -21.611 -38.252 19.781 7.022 -1.154 -0.269 CL16 5ZW 23 5ZW H1 H1 H 0 1 N N N -13.828 -41.213 19.996 -0.082 2.991 1.000 H1 5ZW 24 5ZW H2 H2 H 0 1 N N N -13.473 -41.630 18.285 -0.482 3.179 -0.726 H2 5ZW 25 5ZW H3 H3 H 0 1 N N N -15.288 -40.168 17.513 1.124 1.439 -1.337 H3 5ZW 26 5ZW H4 H4 H 0 1 N N N -15.927 -41.334 18.721 1.951 2.640 -0.316 H4 5ZW 27 5ZW H5 H5 H 0 1 N N N -14.907 -37.792 18.269 0.872 -1.081 1.263 H5 5ZW 28 5ZW H6 H6 H 0 1 N N N -15.251 -37.392 19.985 0.507 -0.688 -0.434 H6 5ZW 29 5ZW H7 H7 H 0 1 N N N -13.415 -38.824 20.734 -1.573 -0.552 0.854 H7 5ZW 30 5ZW H8 H8 H 0 1 N N N -12.801 -37.665 19.507 -0.807 0.530 2.044 H8 5ZW 31 5ZW H9 H9 H 0 1 N N N -17.724 -40.793 18.191 3.202 1.663 -1.235 H9 5ZW 32 5ZW H10 H10 H 0 1 N N N -20.155 -40.337 18.361 5.494 0.843 -1.603 H10 5ZW 33 5ZW H11 H11 H 0 1 N N N -19.339 -36.959 20.882 5.041 -1.899 1.635 H11 5ZW 34 5ZW H12 H12 H 0 1 N N N -16.930 -37.413 20.718 2.749 -1.085 2.010 H12 5ZW 35 5ZW H13 H13 H 0 1 N N N -12.306 -40.082 15.411 -4.176 1.336 1.453 H13 5ZW 36 5ZW H14 H14 H 0 1 N N N -10.511 -41.456 18.897 -2.844 -0.718 -1.893 H14 5ZW 37 5ZW H15 H15 H 0 1 N N N -10.092 -43.686 15.523 -5.916 -2.277 0.153 H15 5ZW 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5ZW O22 C21 DOUB N N 1 5ZW C21 C23 SING N N 2 5ZW C21 N20 SING N N 3 5ZW C23 C1 DOUB N N 4 5ZW N20 C18 SING N N 5 5ZW C1 N17 SING N N 6 5ZW C1 C2 SING N N 7 5ZW C18 N17 SING N N 8 5ZW C18 O19 DOUB N N 9 5ZW O3 C2 DOUB N N 10 5ZW C2 N4 SING N N 11 5ZW C6 C5 SING N N 12 5ZW C6 N7 SING N N 13 5ZW C11 C12 DOUB Y N 14 5ZW C11 C10 SING Y N 15 5ZW N4 C5 SING N N 16 5ZW N4 C9 SING N N 17 5ZW C12 C13 SING Y N 18 5ZW C8 N7 SING N N 19 5ZW C8 C9 SING N N 20 5ZW N7 C10 SING N N 21 5ZW C10 C15 DOUB Y N 22 5ZW C13 CL16 SING N N 23 5ZW C13 C14 DOUB Y N 24 5ZW C15 C14 SING Y N 25 5ZW C5 H1 SING N N 26 5ZW C5 H2 SING N N 27 5ZW C6 H3 SING N N 28 5ZW C6 H4 SING N N 29 5ZW C8 H5 SING N N 30 5ZW C8 H6 SING N N 31 5ZW C9 H7 SING N N 32 5ZW C9 H8 SING N N 33 5ZW C11 H9 SING N N 34 5ZW C12 H10 SING N N 35 5ZW C14 H11 SING N N 36 5ZW C15 H12 SING N N 37 5ZW C23 H13 SING N N 38 5ZW N17 H14 SING N N 39 5ZW N20 H15 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5ZW SMILES ACDLabs 12.01 "O=C(C1=CC(=O)NC(=O)N1)N1CCN(CC1)c1ccc(Cl)cc1" 5ZW InChI InChI 1.03 "InChI=1S/C15H15ClN4O3/c16-10-1-3-11(4-2-10)19-5-7-20(8-6-19)14(22)12-9-13(21)18-15(23)17-12/h1-4,9H,5-8H2,(H2,17,18,21,23)" 5ZW InChIKey InChI 1.03 UPTYXISDRSIHCH-UHFFFAOYSA-N 5ZW SMILES_CANONICAL CACTVS 3.385 "Clc1ccc(cc1)N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3" 5ZW SMILES CACTVS 3.385 "Clc1ccc(cc1)N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3" 5ZW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3)Cl" 5ZW SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1N2CCN(CC2)C(=O)C3=CC(=O)NC(=O)N3)Cl" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5ZW "SYSTEMATIC NAME" ACDLabs 12.01 "6-[4-(4-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione" 5ZW "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[4-(4-chlorophenyl)piperazin-1-yl]carbonyl-1~{H}-pyrimidine-2,4-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5ZW "Create component" 2021-07-30 RCSB 5ZW "Initial release" 2021-11-10 RCSB ##