data_60U
#
_chem_comp.id 60U
_chem_comp.name "5-[(2E,4aR,7aR)-6-(4-ethoxy-5-fluoro-6-methylpyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophene-2-carbonitrile"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H20 F N7 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-01-12
_chem_comp.pdbx_modified_date 2016-03-11
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 429.471
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 60U
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5HDX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
60U C10 C1 C 0 1 Y N N 22.825 10.597 20.649 2.095 -0.750 0.428 C10 60U 1
60U C11 C2 C 0 1 Y N N 15.795 10.603 22.501 -3.811 -0.693 0.150 C11 60U 2
60U C13 C3 C 0 1 N N N 20.339 9.868 20.799 -0.151 0.206 1.120 C13 60U 3
60U C14 C4 C 0 1 N N N 19.663 11.670 22.287 -0.288 2.013 -0.448 C14 60U 4
60U C15 C5 C 0 1 Y N N 15.197 9.751 21.618 -4.746 0.252 -0.274 C15 60U 5
60U C17 C6 C 0 1 Y N N 16.016 9.148 20.689 -4.353 1.576 -0.360 C17 60U 6
60U C18 C7 C 0 1 Y N N 23.002 11.232 19.425 2.876 -1.300 1.362 C18 60U 7
60U N3 N1 N 0 1 N N N 22.430 11.429 23.986 3.043 2.606 -0.146 N3 60U 8
60U C19 C8 C 0 1 Y N N 25.201 10.576 19.851 3.258 -2.815 -0.312 C19 60U 9
60U C22 C9 C 0 1 N N N 26.597 10.416 19.751 3.797 -3.961 -0.981 C22 60U 10
60U C7 C10 C 0 1 Y N N 17.867 10.195 21.566 -2.247 0.985 0.365 C7 60U 11
60U C1 C11 C 0 1 N N R 21.603 10.425 21.483 1.284 0.506 0.623 C1 60U 12
60U C2 C12 C 0 1 N N R 21.119 11.786 21.944 1.020 1.245 -0.706 C2 60U 13
60U C4 C13 C 0 1 N N N 22.359 10.064 23.827 3.046 2.106 1.162 C4 60U 14
60U C5 C14 C 0 1 N N N 21.822 12.345 23.150 2.126 2.196 -1.033 C5 60U 15
60U N6 N2 N 0 1 N N N 21.839 9.587 22.655 1.915 1.428 1.578 N6 60U 16
60U N8 N3 N 0 1 Y N N 17.117 10.813 22.501 -2.585 -0.292 0.460 N8 60U 17
60U N9 N4 N 0 1 N N N 19.286 10.458 21.614 -0.958 1.369 0.697 N9 60U 18
60U N12 N5 N 0 1 Y N N 17.346 9.366 20.656 -3.110 1.904 -0.039 N12 60U 19
60U S16 S1 S 0 1 Y N N 24.338 9.989 21.210 2.143 -1.653 -1.019 S16 60U 20
60U N20 N6 N 0 1 N N N 27.753 10.336 19.758 4.225 -4.870 -1.511 N20 60U 21
60U N21 N7 N 0 1 N N N 22.775 9.261 24.754 4.070 2.274 1.948 N21 60U 22
60U C23 C15 C 0 1 Y N N 24.349 11.214 18.970 3.534 -2.444 0.973 C23 60U 23
60U O24 O1 O 0 1 N N N 21.776 13.549 23.362 2.197 2.622 -2.166 O24 60U 24
60U F25 F1 F 0 1 N N N 13.878 9.538 21.705 -6.006 -0.117 -0.594 F25 60U 25
60U C26 C16 C 0 1 N N N 23.219 11.985 25.068 4.057 3.583 -0.552 C26 60U 26
60U O27 O2 O 0 1 N N N 14.980 11.169 23.465 -4.153 -2.001 0.248 O27 60U 27
60U C28 C17 C 0 1 N N N 15.407 8.232 19.665 -5.328 2.633 -0.813 C28 60U 28
60U C29 C18 C 0 1 N N N 15.213 12.578 23.461 -3.138 -2.905 0.689 C29 60U 29
60U C30 C19 C 0 1 N N N 14.762 13.122 24.795 -3.705 -4.325 0.738 C30 60U 30
60U H1 H1 H 0 1 N N N 20.270 10.198 19.752 -0.530 -0.706 0.657 H1 60U 31
60U H2 H2 H 0 1 N N N 20.311 8.769 20.840 -0.164 0.112 2.206 H2 60U 32
60U H3 H3 H 0 1 N N N 19.094 12.531 21.906 -0.065 3.053 -0.209 H3 60U 33
60U H4 H4 H 0 1 N N N 19.515 11.585 23.374 -0.927 1.965 -1.329 H4 60U 34
60U H5 H5 H 0 1 N N N 22.196 11.693 18.874 2.984 -0.877 2.351 H5 60U 35
60U H6 H6 H 0 1 N N N 21.230 12.496 21.111 0.882 0.527 -1.515 H6 60U 36
60U H7 H7 H 0 1 N N N 23.130 9.756 25.547 4.851 2.754 1.631 H7 60U 37
60U H9 H9 H 0 1 N N N 24.671 11.652 18.037 4.199 -2.996 1.621 H9 60U 38
60U H10 H10 H 0 1 N N N 23.652 11.168 25.664 4.716 3.793 0.290 H10 60U 39
60U H11 H11 H 0 1 N N N 24.028 12.604 24.652 4.640 3.178 -1.378 H11 60U 40
60U H12 H12 H 0 1 N N N 22.576 12.605 25.709 3.568 4.504 -0.869 H12 60U 41
60U H13 H13 H 0 1 N N N 16.195 7.852 18.998 -5.854 3.037 0.052 H13 60U 42
60U H14 H14 H 0 1 N N N 14.918 7.388 20.173 -4.787 3.434 -1.316 H14 60U 43
60U H15 H15 H 0 1 N N N 14.662 8.786 19.075 -6.047 2.191 -1.502 H15 60U 44
60U H16 H16 H 0 1 N N N 16.285 12.780 23.317 -2.297 -2.873 -0.003 H16 60U 45
60U H17 H17 H 0 1 N N N 14.639 13.050 22.650 -2.800 -2.615 1.684 H17 60U 46
60U H18 H18 H 0 1 N N N 14.929 14.209 24.824 -4.546 -4.357 1.431 H18 60U 47
60U H19 H19 H 0 1 N N N 13.691 12.912 24.933 -4.043 -4.616 -0.257 H19 60U 48
60U H20 H20 H 0 1 N N N 15.337 12.641 25.600 -2.931 -5.015 1.074 H20 60U 49
60U H21 H21 H 0 1 N N N 21.609 8.615 22.598 1.551 1.556 2.468 H21 60U 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
60U C23 C18 SING Y N 1
60U C23 C19 DOUB Y N 2
60U C18 C10 DOUB Y N 3
60U C28 C17 SING N N 4
60U C22 N20 TRIP N N 5
60U C22 C19 SING N N 6
60U C19 S16 SING Y N 7
60U C10 S16 SING Y N 8
60U C10 C1 SING N N 9
60U N12 C17 DOUB Y N 10
60U N12 C7 SING Y N 11
60U C17 C15 SING Y N 12
60U C13 C1 SING N N 13
60U C13 N9 SING N N 14
60U C1 C2 SING N N 15
60U C1 N6 SING N N 16
60U C7 N9 SING N N 17
60U C7 N8 DOUB Y N 18
60U N9 C14 SING N N 19
60U C15 F25 SING N N 20
60U C15 C11 DOUB Y N 21
60U C2 C14 SING N N 22
60U C2 C5 SING N N 23
60U N8 C11 SING Y N 24
60U C11 O27 SING N N 25
60U N6 C4 SING N N 26
60U C5 O24 DOUB N N 27
60U C5 N3 SING N N 28
60U C29 O27 SING N N 29
60U C29 C30 SING N N 30
60U C4 N3 SING N N 31
60U C4 N21 DOUB N N 32
60U N3 C26 SING N N 33
60U C13 H1 SING N N 34
60U C13 H2 SING N N 35
60U C14 H3 SING N N 36
60U C14 H4 SING N N 37
60U C18 H5 SING N N 38
60U C2 H6 SING N N 39
60U N21 H7 SING N N 40
60U C23 H9 SING N N 41
60U C26 H10 SING N N 42
60U C26 H11 SING N N 43
60U C26 H12 SING N N 44
60U C28 H13 SING N N 45
60U C28 H14 SING N N 46
60U C28 H15 SING N N 47
60U C29 H16 SING N N 48
60U C29 H17 SING N N 49
60U C30 H18 SING N N 50
60U C30 H19 SING N N 51
60U C30 H20 SING N N 52
60U N6 H21 SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
60U SMILES ACDLabs 12.01 "c1(sc(C#N)cc1)C23CN(CC2C(N(C)\C(=N)N3)=O)c4nc(OCC)c(F)c(n4)C"
60U InChI InChI 1.03 "InChI=1S/C19H20FN7O2S/c1-4-29-15-14(20)10(2)23-18(24-15)27-8-12-16(28)26(3)17(22)25-19(12,9-27)13-6-5-11(7-21)30-13/h5-6,12H,4,8-9H2,1-3H3,(H2,22,25)/t12-,19-/m0/s1"
60U InChIKey InChI 1.03 NAIWJSDALLQSJO-BUXKBTBVSA-N
60U SMILES_CANONICAL CACTVS 3.385 "CCOc1nc(nc(C)c1F)N2C[C@H]3C(=O)N(C)C(=N)N[C@]3(C2)c4sc(cc4)C#N"
60U SMILES CACTVS 3.385 "CCOc1nc(nc(C)c1F)N2C[CH]3C(=O)N(C)C(=N)N[C]3(C2)c4sc(cc4)C#N"
60U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "[H]/N=C/1\N[C@]2(CN(C[C@H]2C(=O)N1C)c3nc(c(c(n3)OCC)F)C)c4ccc(s4)C#N"
60U SMILES "OpenEye OEToolkits" 2.0.4 "CCOc1c(c(nc(n1)N2CC3C(=O)N(C(=N)NC3(C2)c4ccc(s4)C#N)C)C)F"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
60U "SYSTEMATIC NAME" ACDLabs 12.01 "5-[(2E,4aR,7aR)-6-(4-ethoxy-5-fluoro-6-methylpyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophene-2-carbonitrile"
60U "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "5-[(4~{a}~{R},7~{a}~{R})-2-azanylidene-6-(4-ethoxy-5-fluoranyl-6-methyl-pyrimidin-2-yl)-3-methyl-4-oxidanylidene-1,4~{a},5,7-tetrahydropyrrolo[3,4-d]pyrimidin-7~{a}-yl]thiophene-2-carbonitrile"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
60U "Create component" 2016-01-12 RCSB
60U "Initial release" 2016-03-16 RCSB
#