data_619 # _chem_comp.id 619 _chem_comp.name "N-[(E)-3-[(2R,3S,4R,5R)-5-(6-ethylaminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]prop-2-enyl]-5-(4-fluorophenyl)-2,3-dihydroxy-benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H27 F N6 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-06-22 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 550.538 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 619 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3HVI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 619 F30 F30 F 0 1 N N N 0.632 7.275 18.298 1.697 -5.956 1.346 F30 619 1 619 C29 C29 C 0 1 Y N N 0.636 8.442 17.600 2.420 -4.853 1.052 C29 619 2 619 C26 C26 C 0 1 Y N N -0.234 9.470 17.932 3.803 -4.923 1.014 C26 619 3 619 C25 C25 C 0 1 Y N N -0.211 10.625 17.202 4.545 -3.799 0.714 C25 619 4 619 C28 C28 C 0 1 Y N N 1.566 8.567 16.568 1.776 -3.656 0.784 C28 619 5 619 C27 C27 C 0 1 Y N N 1.573 9.758 15.850 2.510 -2.527 0.482 C27 619 6 619 C24 C24 C 0 1 Y N N 0.712 10.813 16.175 3.901 -2.592 0.449 C24 619 7 619 C22 C22 C 0 1 Y N N 0.740 12.088 15.414 4.695 -1.381 0.126 C22 619 8 619 C21 C21 C 0 1 Y N N -0.433 12.765 15.137 4.050 -0.179 -0.138 C21 619 9 619 C23 C23 C 0 1 Y N N 1.961 12.628 14.949 6.089 -1.449 0.093 C23 619 10 619 C33 C33 C 0 1 Y N N 1.989 13.843 14.263 6.834 -0.324 -0.206 C33 619 11 619 O34 O34 O 0 1 N N N 3.159 14.360 13.801 8.192 -0.397 -0.237 O34 619 12 619 C31 C31 C 0 1 Y N N 0.785 14.521 13.954 6.196 0.884 -0.477 C31 619 13 619 O32 O32 O 0 1 N N N 0.913 15.651 13.242 6.929 1.988 -0.771 O32 619 14 619 C20 C20 C 0 1 Y N N -0.402 13.978 14.421 4.799 0.960 -0.441 C20 619 15 619 C18 C18 C 0 1 N N N -1.725 14.653 14.220 4.119 2.239 -0.721 C18 619 16 619 O19 O19 O 0 1 N N N -2.788 14.034 14.389 4.773 3.230 -0.985 O19 619 17 619 N17 N17 N 0 1 N N N -1.710 15.916 13.829 2.773 2.309 -0.684 N17 619 18 619 C16 C16 C 0 1 N N N -2.962 16.664 13.743 2.099 3.580 -0.963 C16 619 19 619 C15 C15 C 0 1 N N N -2.647 18.127 13.934 0.607 3.390 -0.858 C15 619 20 619 C14 C14 C 0 1 N N N -3.455 18.964 14.533 -0.095 4.151 -0.056 C14 619 21 619 C6 C6 C 0 1 N N R -3.110 20.434 14.706 -1.587 3.961 0.049 C6 619 22 619 C4 C4 C 0 1 N N S -3.745 21.016 15.980 -1.997 3.734 1.520 C4 619 23 619 O5 O5 O 0 1 N N N -3.057 22.129 16.471 -2.476 4.949 2.101 O5 619 24 619 C2 C2 C 0 1 N N R -5.128 21.378 15.430 -3.134 2.690 1.436 C2 619 25 619 O3 O3 O 0 1 N N N -5.891 22.275 16.212 -4.348 3.229 1.961 O3 619 26 619 O13 O13 O 0 1 N N N -3.632 21.210 13.616 -1.989 2.756 -0.638 O13 619 27 619 C1 C1 C 0 1 N N R -4.791 21.905 14.044 -3.275 2.411 -0.077 C1 619 28 619 N10 N10 N 0 1 Y N N -5.836 21.722 13.061 -3.568 0.994 -0.309 N10 619 29 619 C9 C9 C 0 1 Y N N -6.350 20.476 12.641 -2.659 0.018 -0.591 C9 619 30 619 C11 C11 C 0 1 Y N N -6.213 22.634 12.097 -4.807 0.406 -0.276 C11 619 31 619 N40 N40 N 0 1 Y N N -5.918 23.944 12.038 -6.044 0.835 -0.051 N40 619 32 619 C39 C39 C 0 1 Y N N -6.396 24.594 10.980 -7.062 0.001 -0.089 C39 619 33 619 N38 N38 N 0 1 Y N N -7.162 24.010 10.030 -6.914 -1.286 -0.347 N38 619 34 619 C35 C35 C 0 1 Y N N -7.500 22.703 10.120 -5.714 -1.807 -0.584 C35 619 35 619 C12 C12 C 0 1 Y N N -7.001 21.922 11.161 -4.597 -0.955 -0.555 C12 619 36 619 N8 N8 N 0 1 Y N N -7.097 20.601 11.551 -3.265 -1.125 -0.737 N8 619 37 619 N7 N7 N 0 1 N N N -8.284 22.247 9.109 -5.569 -3.157 -0.853 N7 619 38 619 C36 C36 C 0 1 N N N -8.960 20.947 9.088 -6.746 -4.029 -0.878 C36 619 39 619 C37 C37 C 0 1 N N N -10.191 20.952 9.941 -6.312 -5.461 -1.196 C37 619 40 619 H26 H26 H 0 1 N N N -0.921 9.359 18.758 4.301 -5.859 1.219 H26 619 41 619 H25 H25 H 0 1 N N N -0.922 11.407 17.425 5.623 -3.855 0.684 H25 619 42 619 H28 H28 H 0 1 N N N 2.255 7.769 16.335 0.697 -3.607 0.810 H28 619 43 619 H27 H27 H 0 1 N N N 2.258 9.872 15.023 2.007 -1.595 0.273 H27 619 44 619 H21 H21 H 0 1 N N N -1.378 12.362 15.471 2.972 -0.126 -0.108 H21 619 45 619 H23 H23 H 0 1 N N N 2.883 12.094 15.127 6.587 -2.384 0.302 H23 619 46 619 HO34 HO34 H 0 0 N N N 3.103 14.481 12.860 8.554 -0.626 -1.104 HO34 619 47 619 HO32 HO32 H 0 0 N N N 0.943 16.395 13.831 7.111 2.099 -1.715 HO32 619 48 619 HN17 HN17 H 0 0 N N N -0.844 16.358 13.593 2.252 1.519 -0.474 HN17 619 49 619 H16 H16 H 0 1 N N N -3.427 16.506 12.759 2.421 4.328 -0.239 H16 619 50 619 H16A H16A H 0 0 N N N -3.664 16.321 14.517 2.352 3.913 -1.969 H16A 619 51 619 H15 H15 H 0 1 N N N -1.707 18.502 13.557 0.118 2.626 -1.443 H15 619 52 619 H14 H14 H 0 1 N N N -4.396 18.599 14.916 0.394 4.916 0.529 H14 619 53 619 H6 H6 H 0 1 N N N -2.012 20.487 14.755 -2.108 4.826 -0.361 H6 619 54 619 H4 H4 H 0 1 N N N -3.747 20.338 16.846 -1.158 3.342 2.095 H4 619 55 619 HO5 HO5 H 0 1 N N N -2.901 22.020 17.402 -1.820 5.659 2.123 HO5 619 56 619 H2 H2 H 0 1 N N N -5.807 20.513 15.429 -2.858 1.781 1.970 H2 619 57 619 HO3 HO3 H 0 1 N N N -6.062 21.888 17.062 -4.297 3.478 2.894 HO3 619 58 619 H1 H1 H 0 1 N N N -4.648 22.993 14.123 -4.057 3.036 -0.507 H1 619 59 619 H9 H9 H 0 1 N N N -6.159 19.539 13.143 -1.594 0.170 -0.681 H9 619 60 619 H39 H39 H 0 1 N N N -6.160 25.643 10.874 -8.054 0.382 0.098 H39 619 61 619 HN7 HN7 H 0 1 N N N -9.024 22.916 9.043 -4.688 -3.525 -1.024 HN7 619 62 619 H36 H36 H 0 1 N N N -9.248 20.715 8.052 -7.236 -4.006 0.095 H36 619 63 619 H36A H36A H 0 0 N N N -8.267 20.191 9.486 -7.439 -3.681 -1.644 H36A 619 64 619 H37 H37 H 0 1 N N N -9.902 20.953 11.002 -5.821 -5.485 -2.169 H37 619 65 619 H37A H37A H 0 0 N N N -10.785 21.851 9.722 -5.618 -5.809 -0.431 H37A 619 66 619 H37B H37B H 0 0 N N N -10.790 20.055 9.725 -7.187 -6.111 -1.215 H37B 619 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 619 F30 C29 SING N N 1 619 C29 C26 DOUB Y N 2 619 C29 C28 SING Y N 3 619 C26 C25 SING Y N 4 619 C25 C24 DOUB Y N 5 619 C28 C27 DOUB Y N 6 619 C27 C24 SING Y N 7 619 C24 C22 SING Y N 8 619 C22 C21 DOUB Y N 9 619 C22 C23 SING Y N 10 619 C21 C20 SING Y N 11 619 C23 C33 DOUB Y N 12 619 C33 O34 SING N N 13 619 C33 C31 SING Y N 14 619 C31 O32 SING N N 15 619 C31 C20 DOUB Y N 16 619 C20 C18 SING N N 17 619 C18 O19 DOUB N N 18 619 C18 N17 SING N N 19 619 N17 C16 SING N N 20 619 C16 C15 SING N N 21 619 C15 C14 DOUB N N 22 619 C14 C6 SING N N 23 619 C6 C4 SING N N 24 619 C6 O13 SING N N 25 619 C4 O5 SING N N 26 619 C4 C2 SING N N 27 619 C2 O3 SING N N 28 619 C2 C1 SING N N 29 619 O13 C1 SING N N 30 619 C1 N10 SING N N 31 619 N10 C9 SING Y N 32 619 N10 C11 SING Y E 33 619 C9 N8 DOUB Y N 34 619 C11 N40 DOUB Y N 35 619 C11 C12 SING Y N 36 619 N40 C39 SING Y N 37 619 C39 N38 DOUB Y N 38 619 N38 C35 SING Y N 39 619 C35 C12 DOUB Y N 40 619 C35 N7 SING N N 41 619 C12 N8 SING Y N 42 619 N7 C36 SING N N 43 619 C36 C37 SING N N 44 619 C26 H26 SING N N 45 619 C25 H25 SING N N 46 619 C28 H28 SING N N 47 619 C27 H27 SING N N 48 619 C21 H21 SING N N 49 619 C23 H23 SING N N 50 619 O34 HO34 SING N N 51 619 O32 HO32 SING N N 52 619 N17 HN17 SING N N 53 619 C16 H16 SING N N 54 619 C16 H16A SING N N 55 619 C15 H15 SING N N 56 619 C14 H14 SING N N 57 619 C6 H6 SING N N 58 619 C4 H4 SING N N 59 619 O5 HO5 SING N N 60 619 C2 H2 SING N N 61 619 O3 HO3 SING N N 62 619 C1 H1 SING N N 63 619 C9 H9 SING N N 64 619 C39 H39 SING N N 65 619 N7 HN7 SING N N 66 619 C36 H36 SING N N 67 619 C36 H36A SING N N 68 619 C37 H37 SING N N 69 619 C37 H37A SING N N 70 619 C37 H37B SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 619 SMILES ACDLabs 10.04 "Fc1ccc(cc1)c2cc(c(O)c(O)c2)C(=O)NC/C=C/C5OC(n4cnc3c(ncnc34)NCC)C(O)C5O" 619 SMILES_CANONICAL CACTVS 3.341 "CCNc1ncnc2n(cnc12)[C@@H]3O[C@H](/C=C/CNC(=O)c4cc(cc(O)c4O)c5ccc(F)cc5)[C@@H](O)[C@H]3O" 619 SMILES CACTVS 3.341 "CCNc1ncnc2n(cnc12)[CH]3O[CH](C=CCNC(=O)c4cc(cc(O)c4O)c5ccc(F)cc5)[CH](O)[CH]3O" 619 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCNc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)\C=C\CNC(=O)c4cc(cc(c4O)O)c5ccc(cc5)F)O)O" 619 SMILES "OpenEye OEToolkits" 1.5.0 "CCNc1c2c(ncn1)n(cn2)C3C(C(C(O3)C=CCNC(=O)c4cc(cc(c4O)O)c5ccc(cc5)F)O)O" 619 InChI InChI 1.03 "InChI=1S/C27H27FN6O6/c1-2-29-24-20-25(32-12-31-24)34(13-33-20)27-23(38)22(37)19(40-27)4-3-9-30-26(39)17-10-15(11-18(35)21(17)36)14-5-7-16(28)8-6-14/h3-8,10-13,19,22-23,27,35-38H,2,9H2,1H3,(H,30,39)(H,29,31,32)/b4-3+/t19-,22-,23-,27-/m1/s1" 619 InChIKey InChI 1.03 NOCNCHHJBSJZFZ-CJLJSIFTSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 619 "SYSTEMATIC NAME" ACDLabs 10.04 "N-ethyl-9-[(5E)-5,6,7-trideoxy-7-{[(4'-fluoro-4,5-dihydroxybiphenyl-3-yl)carbonyl]amino}-beta-D-ribo-hept-5-enofuranosyl]-9H-purin-6-amine" 619 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N-[(E)-3-[(2R,3S,4R,5R)-5-(6-ethylaminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]prop-2-enyl]-5-(4-fluorophenyl)-2,3-dihydroxy-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 619 "Create component" 2009-06-22 PDBJ 619 "Modify aromatic_flag" 2011-06-04 RCSB 619 "Modify descriptor" 2011-06-04 RCSB #