data_656 # _chem_comp.id 656 _chem_comp.name "2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-ISOBUTOXYBENZENOLATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms CRA_10656 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-03-14 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 324.377 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 656 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1O2J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 656 C1 C1 C 0 1 Y N N 44.461 -3.087 26.246 4.929 -0.413 0.027 C1 656 1 656 C2 C2 C 0 1 Y N N 44.840 -1.726 26.288 5.060 0.815 0.689 C2 656 2 656 C3 C3 C 0 1 Y N N 44.803 -0.997 27.477 3.967 1.602 0.910 C3 656 3 656 C4 C4 C 0 1 Y N N 44.390 -1.643 28.603 2.711 1.191 0.478 C4 656 4 656 C5 C5 C 0 1 Y N N 44.023 -2.929 28.619 2.561 -0.040 -0.188 C5 656 5 656 C6 C6 C 0 1 Y N N 44.047 -3.695 27.448 3.681 -0.841 -0.412 C6 656 6 656 C7 C7 C 0 1 N N N 44.506 -3.793 25.018 6.121 -1.255 -0.205 C7 656 7 656 N1 N1 N 0 1 N N N 44.294 -5.092 24.975 7.318 -0.846 0.214 N1 656 8 656 N2 N2 N 1 1 N N N 44.751 -3.116 23.913 5.999 -2.423 -0.834 N2 656 9 656 N3 N3 N 0 1 Y N N 44.263 -1.231 29.809 1.451 1.746 0.549 N3 656 10 656 N4 N4 N 0 1 Y N N 43.665 -3.336 29.822 1.244 -0.178 -0.482 N4 656 11 656 C8 C8 C 0 1 Y N N 43.839 -2.226 30.516 0.587 0.872 -0.055 C8 656 12 656 "C1'" "C1'" C 0 1 Y N N 43.617 -2.105 31.890 -0.869 1.080 -0.199 "C1'" 656 13 656 "C2'" "C2'" C 0 1 Y N N 43.283 -3.226 32.644 -1.370 2.345 -0.513 "C2'" 656 14 656 "C3'" "C3'" C 0 1 Y N N 43.074 -3.119 34.015 -2.729 2.535 -0.646 "C3'" 656 15 656 "C4'" "C4'" C 0 1 Y N N 43.199 -1.898 34.638 -3.603 1.476 -0.471 "C4'" 656 16 656 "C5'" "C5'" C 0 1 Y N N 43.534 -0.769 33.901 -3.120 0.215 -0.160 "C5'" 656 17 656 "C6'" "C6'" C 0 1 Y N N 43.739 -0.867 32.536 -1.753 0.010 -0.017 "C6'" 656 18 656 "O6'" "O6'" O -1 1 N N N 44.050 0.287 31.836 -1.276 -1.225 0.288 "O6'" 656 19 656 "O5'" "O5'" O 0 1 N N N 43.698 0.470 34.490 -3.985 -0.821 0.010 "O5'" 656 20 656 C10 C10 C 0 1 N N N 43.550 0.779 35.862 -5.300 -0.300 -0.194 C10 656 21 656 C20 C20 C 0 1 N N N 44.061 2.233 36.055 -6.326 -1.421 -0.015 C20 656 22 656 C30 C30 C 0 1 N N N 42.871 3.085 36.427 -6.303 -1.907 1.435 C30 656 23 656 C40 C40 C 0 1 N N N 45.020 2.275 37.268 -7.721 -0.893 -0.355 C40 656 24 656 HC2 HC2 H 0 1 N N N 45.170 -1.215 25.399 6.033 1.140 1.027 HC2 656 25 656 HC3 HC3 H 0 1 N N N 45.090 0.043 27.514 4.078 2.547 1.420 HC3 656 26 656 HC6 HC6 H 0 1 N N N 43.748 -4.733 27.473 3.580 -1.787 -0.923 HC6 656 27 656 HH11 HH11 H 0 0 N N N 44.105 -5.581 25.839 7.407 0.004 0.672 HH11 656 28 656 HH12 HH12 H 0 0 N N N 44.286 -5.652 24.153 8.100 -1.399 0.062 HH12 656 29 656 HH21 HH21 H 0 0 N N N 44.867 -2.113 23.947 6.782 -2.976 -0.987 HH21 656 30 656 HH22 HH22 H 0 0 N N N 44.849 -3.543 23.019 5.128 -2.720 -1.140 HH22 656 31 656 HN3 HN3 H 0 1 N N N 44.433 -0.334 30.197 1.219 2.598 0.952 HN3 656 32 656 "HC2'" "HC2'" H 0 0 N N N 43.183 -4.188 32.161 -0.692 3.174 -0.651 "HC2'" 656 33 656 "HC3'" "HC3'" H 0 0 N N N 42.813 -3.995 34.592 -3.113 3.515 -0.889 "HC3'" 656 34 656 "HC4'" "HC4'" H 0 0 N N N 43.035 -1.828 35.703 -4.666 1.633 -0.577 "HC4'" 656 35 656 H10A H10A H 0 0 N N N 42.507 0.671 36.118 -5.377 0.107 -1.202 H10A 656 36 656 H10B H10B H 0 0 N N N 44.134 0.072 36.434 -5.494 0.489 0.533 H10B 656 37 656 H20 H20 H 0 1 N N N 44.542 2.619 35.168 -6.078 -2.249 -0.680 H20 656 38 656 H30A H30A H 0 0 N N N 43.164 4.116 36.558 -6.550 -1.079 2.100 H30A 656 39 656 H30B H30B H 0 0 N N N 42.117 3.016 35.659 -7.034 -2.706 1.562 H30B 656 40 656 H30C H30C H 0 0 N N N 42.450 2.722 37.357 -5.309 -2.283 1.677 H30C 656 41 656 H40A H40A H 0 0 N N N 45.973 1.840 37.003 -7.968 -0.066 0.310 H40A 656 42 656 H40B H40B H 0 0 N N N 45.180 3.290 37.604 -7.737 -0.547 -1.388 H40B 656 43 656 H40C H40C H 0 0 N N N 44.612 1.709 38.093 -8.452 -1.692 -0.228 H40C 656 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 656 C1 C2 DOUB Y N 1 656 C1 C6 SING Y N 2 656 C1 C7 SING N N 3 656 C2 C3 SING Y N 4 656 C2 HC2 SING N N 5 656 C3 C4 DOUB Y N 6 656 C3 HC3 SING N N 7 656 C4 C5 SING Y N 8 656 C4 N3 SING Y N 9 656 C5 C6 DOUB Y N 10 656 C5 N4 SING Y N 11 656 C6 HC6 SING N N 12 656 C7 N1 SING N N 13 656 C7 N2 DOUB N N 14 656 N1 HH11 SING N N 15 656 N1 HH12 SING N N 16 656 N2 HH21 SING N N 17 656 N2 HH22 SING N N 18 656 N3 C8 SING Y N 19 656 N3 HN3 SING N N 20 656 N4 C8 DOUB Y N 21 656 C8 "C1'" SING Y N 22 656 "C1'" "C2'" DOUB Y N 23 656 "C1'" "C6'" SING Y N 24 656 "C2'" "C3'" SING Y N 25 656 "C2'" "HC2'" SING N N 26 656 "C3'" "C4'" DOUB Y N 27 656 "C3'" "HC3'" SING N N 28 656 "C4'" "C5'" SING Y N 29 656 "C4'" "HC4'" SING N N 30 656 "C5'" "C6'" DOUB Y N 31 656 "C5'" "O5'" SING N N 32 656 "C6'" "O6'" SING N N 33 656 "O5'" C10 SING N N 34 656 C10 C20 SING N N 35 656 C10 H10A SING N N 36 656 C10 H10B SING N N 37 656 C20 C30 SING N N 38 656 C20 C40 SING N N 39 656 C20 H20 SING N N 40 656 C30 H30A SING N N 41 656 C30 H30B SING N N 42 656 C30 H30C SING N N 43 656 C40 H40A SING N N 44 656 C40 H40B SING N N 45 656 C40 H40C SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 656 SMILES ACDLabs 10.04 "[O-]c3c(OCC(C)C)cccc3c2nc1cc(ccc1n2)\C(=[NH2+])N" 656 SMILES_CANONICAL CACTVS 3.341 "CC(C)COc1cccc(c1[O-])c2[nH]c3ccc(cc3n2)C(N)=[NH2+]" 656 SMILES CACTVS 3.341 "CC(C)COc1cccc(c1[O-])c2[nH]c3ccc(cc3n2)C(N)=[NH2+]" 656 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)COc1cccc(c1[O-])c2[nH]c3ccc(cc3n2)C(=[NH2+])N" 656 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)COc1cccc(c1[O-])c2[nH]c3ccc(cc3n2)C(=[NH2+])N" 656 InChI InChI 1.03 "InChI=1S/C18H20N4O2/c1-10(2)9-24-15-5-3-4-12(16(15)23)18-21-13-7-6-11(17(19)20)8-14(13)22-18/h3-8,10,23H,9H2,1-2H3,(H3,19,20)(H,21,22)" 656 InChIKey InChI 1.03 HSHVHNIOQTZSOQ-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 656 "SYSTEMATIC NAME" ACDLabs 10.04 "2-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-6-(2-methylpropoxy)phenolate" 656 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[5-(amino-azaniumylidene-methyl)-1H-benzimidazol-2-yl]-6-(2-methylpropoxy)phenolate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 656 "Create component" 2003-03-14 RCSB 656 "Modify aromatic_flag" 2011-06-04 RCSB 656 "Modify descriptor" 2011-06-04 RCSB 656 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 656 _pdbx_chem_comp_synonyms.name CRA_10656 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##