data_69I # _chem_comp.id 69I _chem_comp.name ;beta-D-glucopyranosylmethanol 3,4,1'-trisphosphate ; _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H17 O15 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(2S,3S,4R,5R,6R)-6-(hydroxymethyl)-3-oxidanyl-4,5-diphosphonooxy-oxan-2-yl]methyl dihydrogen phosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-12 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 434.122 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PPI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 69I C2 C1 C 0 1 N N S N N N 10.564 30.121 86.898 -0.487 -1.146 -0.454 C2 69I 1 69I C3 C2 C 0 1 N N R N N N 11.882 29.880 87.614 0.870 -0.735 0.127 C3 69I 2 69I C4 C3 C 0 1 N N R N N N 12.515 28.566 87.188 1.072 0.767 -0.092 C4 69I 3 69I C5 C4 C 0 1 N N R N N N 12.641 28.531 85.670 -0.090 1.530 0.550 C5 69I 4 69I C6 C5 C 0 1 N N N N N N 13.199 27.238 85.119 0.073 3.028 0.284 C6 69I 5 69I C1 C6 C 0 1 N N S N N N 10.783 29.989 85.395 -1.589 -0.310 0.202 C1 69I 6 69I O11 O1 O 0 1 N N N N N N 15.982 27.252 88.355 4.676 2.293 0.688 O11 69I 7 69I C01 C7 C 0 1 N N N N N N 9.494 30.114 84.631 -2.941 -0.673 -0.416 C01 69I 8 69I O12 O2 O 0 1 N N N N N N 13.796 26.014 88.119 3.008 3.023 -1.060 O12 69I 9 69I O04 O3 O 0 1 N N N N N N 7.416 29.240 82.513 -6.409 0.892 0.784 O04 69I 10 69I O08 O4 O 0 1 N N N N N N 11.632 29.845 89.030 1.911 -1.459 -0.532 O08 69I 11 69I O03 O5 O 0 1 N N N N N N 9.249 29.686 80.836 -5.723 0.194 -1.543 O03 69I 12 69I P4 P1 P 0 1 N N N N N N 14.501 27.240 88.658 3.508 1.840 -0.324 P4 69I 13 69I O01 O6 O 0 1 N N N N N N 9.760 29.765 83.264 -3.981 0.021 0.275 O01 69I 14 69I O05 O7 O 0 1 N N N N N N 11.008 32.151 89.643 2.153 -3.447 1.004 O05 69I 15 69I O06 O8 O 0 1 N N N N N N 13.311 31.301 90.234 3.876 -3.181 -0.821 O06 69I 16 69I O10 O9 O 0 1 N N N N N N 14.195 27.492 90.120 4.093 0.765 -1.370 O10 69I 17 69I O02 O10 O 0 1 N N N N N N 8.359 31.571 82.258 -6.021 -1.635 0.170 O02 69I 18 69I P1 P2 P 0 1 N N N N N N 8.623 30.084 82.155 -5.538 -0.125 -0.110 P1 69I 19 69I O09 O11 O 0 1 N N N N N N 13.817 28.442 87.798 2.302 1.176 0.510 O09 69I 20 69I O07 O12 O 0 1 N N N N N N 11.294 30.378 91.438 3.829 -1.578 1.262 O07 69I 21 69I P3 P3 P 0 1 N N N N N N 11.830 30.989 90.165 2.925 -2.438 0.245 P3 69I 22 69I O2 O13 O 0 1 N N N N N N 10.080 31.426 87.186 -0.718 -2.532 -0.191 O2 69I 23 69I O5 O14 O 0 1 N N N N N N 11.338 28.698 85.094 -1.323 1.077 -0.013 O5 69I 24 69I O6 O15 O 0 1 N N N N N N 13.626 27.410 83.773 -0.945 3.749 0.980 O6 69I 25 69I H1 H1 H 0 1 N N N N N N 9.836 29.362 87.221 -0.489 -0.974 -1.530 H1 69I 26 69I H2 H2 H 0 1 N N N N N N 12.573 30.702 87.374 0.891 -0.956 1.194 H2 69I 27 69I H3 H3 H 0 1 N N N N N N 11.868 27.737 87.511 1.102 0.979 -1.161 H3 69I 28 69I H4 H4 H 0 1 N N N N N N 13.294 29.358 85.355 -0.093 1.350 1.625 H4 69I 29 69I H5 H5 H 0 1 N N N N N N 12.419 26.463 85.155 1.053 3.354 0.634 H5 69I 30 69I H6 H6 H 0 1 N N N N N N 14.056 26.924 85.733 -0.013 3.218 -0.786 H6 69I 31 69I H7 H7 H 0 1 N N N N N N 11.473 30.780 85.067 -1.611 -0.515 1.272 H7 69I 32 69I H8 H8 H 0 1 N N N N N N 16.213 26.469 87.869 5.437 2.702 0.254 H8 69I 33 69I H9 H9 H 0 1 N N N N N N 9.124 31.148 84.688 -2.948 -0.386 -1.467 H9 69I 34 69I H10 H10 H 0 1 N N N N N N 8.741 29.431 85.052 -3.102 -1.748 -0.331 H10 69I 35 69I H11 H11 H 0 1 N N N N N N 7.265 28.597 81.830 -7.359 0.858 0.604 H11 69I 36 69I H12 H12 H 0 1 N N N N N N 13.463 32.189 89.931 4.514 -3.789 -0.423 H12 69I 37 69I H13 H13 H 0 1 N N N N N N 13.604 26.821 90.440 4.439 -0.038 -0.957 H13 69I 38 69I H14 H14 H 0 1 N N N N N N 8.640 31.999 81.458 -5.928 -1.913 1.092 H14 69I 39 69I H15 H15 H 0 1 N N N N N N 10.508 30.840 91.705 4.364 -0.896 0.832 H15 69I 40 69I H16 H16 H 0 1 N N N N N N 10.393 31.699 88.041 -1.561 -2.861 -0.532 H16 69I 41 69I H17 H17 H 0 1 N N N N N N 13.973 26.590 83.443 -0.903 4.707 0.857 H17 69I 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 69I O03 P1 DOUB N N 1 69I P1 O02 SING N N 2 69I P1 O04 SING N N 3 69I P1 O01 SING N N 4 69I O01 C01 SING N N 5 69I O6 C6 SING N N 6 69I C01 C1 SING N N 7 69I O5 C1 SING N N 8 69I O5 C5 SING N N 9 69I C6 C5 SING N N 10 69I C1 C2 SING N N 11 69I C5 C4 SING N N 12 69I C2 O2 SING N N 13 69I C2 C3 SING N N 14 69I C4 C3 SING N N 15 69I C4 O09 SING N N 16 69I C3 O08 SING N N 17 69I O09 P4 SING N N 18 69I O12 P4 DOUB N N 19 69I O11 P4 SING N N 20 69I P4 O10 SING N N 21 69I O08 P3 SING N N 22 69I O05 P3 DOUB N N 23 69I P3 O06 SING N N 24 69I P3 O07 SING N N 25 69I C2 H1 SING N N 26 69I C3 H2 SING N N 27 69I C4 H3 SING N N 28 69I C5 H4 SING N N 29 69I C6 H5 SING N N 30 69I C6 H6 SING N N 31 69I C1 H7 SING N N 32 69I O11 H8 SING N N 33 69I C01 H9 SING N N 34 69I C01 H10 SING N N 35 69I O04 H11 SING N N 36 69I O06 H12 SING N N 37 69I O10 H13 SING N N 38 69I O02 H14 SING N N 39 69I O07 H15 SING N N 40 69I O2 H16 SING N N 41 69I O6 H17 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 69I InChI InChI 1.06 "InChI=1S/C7H17O15P3/c8-1-3-6(21-24(13,14)15)7(22-25(16,17)18)5(9)4(20-3)2-19-23(10,11)12/h3-9H,1-2H2,(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)/t3-,4+,5+,6-,7-/m1/s1" 69I InChIKey InChI 1.06 OTRMZOXLRJYKRS-VOQCIKJUSA-N 69I SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](CO[P](O)(O)=O)[C@H](O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O" 69I SMILES CACTVS 3.385 "OC[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O" 69I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)COP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O" 69I SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)COP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O" # _pdbx_chem_comp_identifier.comp_id 69I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-3-oxidanyl-4,5-diphosphonooxy-oxan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 69I "Create component" 2023-07-12 PDBE 69I "Initial release" 2024-02-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 69I _pdbx_chem_comp_synonyms.name "[(2S,3S,4R,5R,6R)-6-(hydroxymethyl)-3-oxidanyl-4,5-diphosphonooxy-oxan-2-yl]methyl dihydrogen phosphate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #